M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_20608

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_20608 22 0.46 Mlig455_038738

Neo: -

Age: -

Region-enriched R3: 4.888/0.04617

 Mlig455_038738 {REF} {Length: 739} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_49355.1} {RNA815_59105}

Cumulative graph for MligTC455_20608

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -9.018 0.843 1.00000 1.00000
RegionR2 4.902 0.843 0.08476 0.35773
RegionR3 4.888 0.843 0.00183 0.04617
RegionR4 -1.429 0.843 0.93485 1.00000
RegionR5 -1.138 0.843 0.86865 1.00000
RegionR6 1.267 0.843 0.47462 1.00000
RegionR7 2.207 0.843 0.79303 1.00000
RegionR8 -1.68 0.843 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 6.281 0.843 1.00000 1.00000
RegenerationR2 -1.033 0.843 0.58299 0.90839
RegenerationR3 -2.058 0.843 0.49032 0.85419
RegenerationR4 0.113 0.843 0.74519 0.96949
RegenerationR5 1.261 0.843 0.77263 0.98005
RegenerationR6 0.693 0.843 0.79870 0.97631
RegenerationBL 0.518 0.843 0.99987 1.00000
RegenerationTP 1.002 0.843 0.99990 1.00000


Genes with expression patterns similar to MligTC455_20608

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_20608 22 0.46 Mlig455_038738

Neo: -

Age: -

Region-enriched R3: 4.888/0.04617

 2 1.000 1.000 - - - - Mlig455_038738 {REF} {Length: 739} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_49355.1} {RNA815_59105}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA