Data search
Results for MligTC455_20616
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_20616 | 45 | 0.95 | Mlig455_042714 | Neo: - Age: Down-Up-Down |
Mlig455_042714 {REF} {Length: 2552} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=19.2]} {Smed: dd_Smed_v6_17729_0_1, dd_Smed_v6_17729_0_1, [RH, Score=57.0, Expect=6e-09]} {RNA1509_51521} {RNA1310_20020} {RNA815_8964} |
Cumulative graph for MligTC455_20616
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_20616
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_20616 | 45 | 0.95 | Mlig455_042714 | Neo: - Age: Down-Up-Down |
2 | - | - | - | 1.000 | - | 1.000 | Mlig455_042714 {REF} {Length: 2552} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=19.2]} {Smed: dd_Smed_v6_17729_0_1, dd_Smed_v6_17729_0_1, [RH, Score=57.0, Expect=6e-09]} {RNA1509_51521} {RNA1310_20020} {RNA815_8964} | |
| 2. | MligTC455_45906 | 38 | 0.79 | Mlig455_063368 | Neo: - Age: - |
KCNK18 | 0.969 | - | - | - | - | - | 0.969 | Mlig455_063368 {REF} {Length: 3838} {Pfam: Ion channel [PF07885.18, score=104.5]; Beta-carotene 15,15'-dioxygenase [PF15461.8, score=23.6]; Ion transport protein [PF00520.33, score=20.3]} {Human: ENSG00000186795, KCNK18, potassium two pore domain channel subfamily K member 18, [Score=71.6, Expect=1e-12]} {Mouse: ENSMUSG00000040901, Kcnk18, potassium channel, subfamily K, member 18, [Score=77.0, Expect=2e-14]} {Dmel: FBgn0035192, CG9194, [Score=109, Expect=2e-24]} {Celegans: WBGene00006690, twk-39, TWiK family of potassium channels, [RH, Score=191, Expect=6e-52]} {Smed: dd_Smed_v6_21895_0_1, dd_Smed_v6_21895_0_1, [RH, Score=297, Expect=2e-91]} {RNA1509_28862} {RNA1310_2954.1} {RNA815_1045} |
| 3. | MligTC455_08175 | 30 | 0.62 | Mlig455_002592 | Neo: - Age: - |
RABEP1 | 0.963 | - | - | - | 0.963 | - | - | Mlig455_002592 {REF} {Length: 1551} {TRANSSPLICED} {Pfam: Rabaptin-like protein [PF09311.13, score=107.3]; FYVE zinc finger [PF01363.23, score=25.6]; TPR/MLP1/MLP2-like protein [PF07926.14, score=19.1]} {Human: ENSG00000029725, RABEP1, rabaptin, RAB GTPase binding effector protein 1, [RH, Score=78.2, Expect=1e-14]} {Mouse: ENSMUSG00000020817, Rabep1, rabaptin, RAB GTPase binding effector protein 1, [RH, Score=76.3, Expect=3e-14]} {Dmel: FBgn0034585, Rbpn-5, Rabaptin-5, [Score=144, Expect=6e-37]} {Celegans: WBGene00017161, rabn-5, RABaptiN (Rab effector), [RH, Score=178, Expect=5e-51]} {Smed: dd_Smed_v6_5961_0_1, dd_Smed_v6_5961_0_1, [RH, Score=164, Expect=7e-44]} {RNA1509_22986} {RNA1310_17533.1, RNA1509_22986} {RNA1509_22986, RNA815_6270} |
| 4. | MligTC455_17401 | 81 | 1.7 | Mlig455_001331, Mlig455_070592 | Neo: - Age: - |
0.963 | - | - | - | 0.963 | - | - | Mlig455_001331 {REF} {Length: 2397} {TRANSSPLICED} {RNA1509_21152} {RNA1310_7230} {RNA815_15379} Mlig455_070592 {REF} {Length: 4041} {TRANSSPLICED} {RNA1509_21152, RNA1509_55944} {RNA1310_7230, RNA1509_21152, RNA1509_55944} {RNA1509_21152, RNA1509_55944, RNA815_15379} |
|
| 5. | MligTC455_07576 | 29 | 0.6 | Mlig455_006213 | Neo: - Age: - |
0.961 | - | - | - | 0.961 | - | - | Mlig455_006213 {REF} {Length: 257} {NoTransDecoderORF} |
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