TomoSeq data search

Data search

Results for MligTC455_20671

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_20671	32	0.66	Mlig455_012508, Mlig455_047632	Neo: - Age: -		Mlig455_012508 {REF} {Length: 202} {NoTransDecoderORF} {RNA1509_34715} {RNA1310_120553} {RNA815_38326} Mlig455_047632 {REF} {Length: 163} {NoTransDecoderORF} {RNA1509_35425} {RNA1310_120553} {RNA815_40733}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_20671

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.377	1.037	0.99978	1.00000
RegionR2	5.654	1.037	0.99980	1.00000
RegionR3	0.745	1.037	0.99995	1.00000
RegionR4	-5.047	1.037	0.99972	1.00000
RegionR5	-1.113	1.037	0.99983	1.00000
RegionR6	0.769	1.037	1.00000	1.00000
RegionR7	1.831	1.037	0.99993	1.00000
RegionR8	2.538	1.037	0.99992	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	6.6	1.037	0.99994	1.00000
RegenerationR2	4.317	1.037	0.00130	0.05360
RegenerationR3	7.51	1.037	0.00018	0.01693
RegenerationR4	6.623	1.037	0.00031	0.01552
RegenerationR5	5.239	1.037	0.00055	0.03847
RegenerationR6	5.74	1.037	0.00162	0.04476
RegenerationBL	5.185	1.037	0.00587	0.07292
RegenerationTP	4.899	1.037	0.01737	0.22580

Genes with expression patterns similar to MligTC455_20671

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_20671	32	0.66	Mlig455_012508, Mlig455_047632	Neo: - Age: -		2	-	-	-	-	1.000	1.000	Mlig455_012508 {REF} {Length: 202} {NoTransDecoderORF} {RNA1509_34715} {RNA1310_120553} {RNA815_38326} Mlig455_047632 {REF} {Length: 163} {NoTransDecoderORF} {RNA1509_35425} {RNA1310_120553} {RNA815_40733}
2.	MligTC455_17421	67	1.39	Mlig455_008476	Neo: - Age: -	ARL4A	0.962	-	-	-	-	-	0.962	Mlig455_008476 {REF} {Length: 1473} {Pfam: ADP-ribosylation factor family [PF00025.23, score=103.3]; Signal recognition particle receptor beta subunit [PF09439.12, score=47.6]; 50S ribosome-binding GTPase [PF01926.25, score=25.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=20.6]; AAA ATPase domain [PF13191.8, score=19.8]; NACHT domain [PF05729.14, score=19.5]} {Human: ENSG00000122644, ARL4A, ADP ribosylation factor like GTPase 4A, [Score=94.7, Expect=5e-23]; ENSG00000113595, TRIM23, tripartite motif containing 23, [Score=92.0, Expect=2e-20]} {Mouse: ENSMUSG00000047446, Arl4a, ADP-ribosylation factor-like 4A, [Score=95.5, Expect=2e-23]; ENSMUSG00000021712, Trim23, tripartite motif-containing 23, [Score=92.4, Expect=1e-20]; ENSMUSG00000034936, Arl4d, ADP-ribosylation factor-like 4D, [Score=92.0, Expect=3e-22]} {Dmel: FBgn0000115, Arl1, ADP ribosylation factor-like 1, [Score=94.0, Expect=3e-23]} {Celegans: WBGene00000187, arl-1, ADP-ribosylation factor-like protein 1, [Score=89.7, Expect=1e-21]} {Smed: dd_Smed_v6_2013_0_1, dd_Smed_v6_2013_0_1, [Score=100, Expect=1e-25]} {RNA1310_31391} {RNA815_53202}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_20671

0.66

Mlig455_012508, Mlig455_047632

Neo: -

Age: -

1.000

Mlig455_012508 {REF} {Length: 202} {NoTransDecoderORF} {RNA1509_34715} {RNA1310_120553} {RNA815_38326}

Mlig455_047632 {REF} {Length: 163} {NoTransDecoderORF} {RNA1509_35425} {RNA1310_120553} {RNA815_40733}

MligTC455_17421

1.39

Mlig455_008476

Neo: -

Age: -

ARL4A

0.962

Mlig455_008476 {REF} {Length: 1473} {Pfam: ADP-ribosylation factor family [PF00025.23, score=103.3]; Signal recognition particle receptor beta subunit [PF09439.12, score=47.6]; 50S ribosome-binding GTPase [PF01926.25, score=25.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=20.6]; AAA ATPase domain [PF13191.8, score=19.8]; NACHT domain [PF05729.14, score=19.5]} {Human: ENSG00000122644, ARL4A, ADP ribosylation factor like GTPase 4A, [Score=94.7, Expect=5e-23]; ENSG00000113595, TRIM23, tripartite motif containing 23, [Score=92.0, Expect=2e-20]} {Mouse: ENSMUSG00000047446, Arl4a, ADP-ribosylation factor-like 4A, [Score=95.5, Expect=2e-23]; ENSMUSG00000021712, Trim23, tripartite motif-containing 23, [Score=92.4, Expect=1e-20]; ENSMUSG00000034936, Arl4d, ADP-ribosylation factor-like 4D, [Score=92.0, Expect=3e-22]} {Dmel: FBgn0000115, Arl1, ADP ribosylation factor-like 1, [Score=94.0, Expect=3e-23]} {Celegans: WBGene00000187, arl-1, ADP-ribosylation factor-like protein 1, [Score=89.7, Expect=1e-21]} {Smed: dd_Smed_v6_2013_0_1, dd_Smed_v6_2013_0_1, [Score=100, Expect=1e-25]} {RNA1310_31391} {RNA815_53202}