Data search


search
Exact
Search

Results for MligTC455_20747

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_20747 921 19.18 Mlig455_061281

Neo: Int S/G2/M

Age: Up-Down-Down

Mlig455_061281 {REF} {Length: 4032} {TRANSSPLICED} {Pfam: WWE domain [PF02825.22, score=20.2]} {RNA1509_38136, RNA1509_52884, RNA1509_8660} {RNA1310_14747, RNA1509_38136, RNA1509_52884, RNA1509_8660} {RNA1509_38136, RNA1509_52884, RNA1509_8660, RNA815_10812.2}

Cumulative graph for MligTC455_20747

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.39 4.559 0.67523 1.00000
RegionR2 0.214 4.559 0.69009 1.00000
RegionR3 -0.2 4.559 0.65781 1.00000
RegionR4 1.059 4.559 0.03041 0.13724
RegionR5 -0.271 4.559 0.49696 0.86030
RegionR6 -0.85 4.559 0.06401 0.47436
RegionR7 -0.769 4.559 0.20129 0.80964
RegionR8 0.427 4.559 0.49337 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.511 4.559 0.65750 1.00000
RegenerationR2 0.162 4.559 0.73927 0.96951
RegenerationR3 0.47 4.559 0.37748 0.78912
RegenerationR4 -0.327 4.559 0.53885 0.88807
RegenerationR5 0.681 4.559 0.17132 0.59939
RegenerationR6 1.045 4.559 0.05012 0.28016
RegenerationBL 0.187 4.559 0.76038 1.00000
RegenerationTP -0.199 4.559 0.76281 1.00000


Genes with expression patterns similar to MligTC455_20747

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_20747 921 19.18 Mlig455_061281

Neo: Int S/G2/M

Age: Up-Down-Down

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_061281 {REF} {Length: 4032} {TRANSSPLICED} {Pfam: WWE domain [PF02825.22, score=20.2]} {RNA1509_38136, RNA1509_52884, RNA1509_8660} {RNA1310_14747, RNA1509_38136, RNA1509_52884, RNA1509_8660} {RNA1509_38136, RNA1509_52884, RNA1509_8660, RNA815_10812.2}
2. MligTC455_33719 1065 22.18 Mlig455_020303, Mlig455_060561

Neo: Irradiation

Age: -

Region-specific R4: 2.987

Region-enriched R4: 1.816/0.00023

2.644 - 0.956 - 0.876 - 0.812

Mlig455_020303 {REF} {Length: 4827} {Pfam: Hedgehog signalling target [PF15324.8, score=46.1]} {RNA1509_1463, RNA1509_20401, RNA1509_31166, RNA1509_44754} {RNA1310_1601, RNA1509_1463, RNA1509_20401, RNA1509_31166, RNA1509_44754} {RNA1509_1463, RNA1509_20401, RNA1509_31166, RNA1509_44754, RNA815_9185}

Mlig455_060561 {REF} {Length: 685} {NoTransDecoderORF}
3. MligTC455_24624 929 19.36 Mlig455_020361

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 3.301

Region-enriched R4: 1.914/0.00009

2.623 - 0.956 - 0.858 - 0.809 Mlig455_020361 {REF} {Length: 4762} {Pfam: Hedgehog signalling target [PF15324.8, score=42.1]} {RNA1509_1463} {RNA1310_1601} {RNA815_9185}
4. MligTC455_48798 526 10.97 Mlig455_051450

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 4.177

Region-enriched R4: 2.379/0.00002

ZDHHC14 1.788 - 0.950 - - - 0.838 Mlig455_051450 {REF} {Length: 1389} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=120.5]} {Human: ENSG00000175048, ZDHHC14, zinc finger DHHC-type containing 14, [Score=209, Expect=2e-63]} {Mouse: ENSMUSG00000034265, Zdhhc14, zinc finger, DHHC domain containing 14, [Score=213, Expect=9e-65]} {Dmel: FBgn0260941, app, approximated, [Score=199, Expect=1e-60]} {Celegans: WBGene00012948, dhhc-2, Palmitoyltransferase, [Score=155, Expect=9e-44]} {Smed: dd_Smed_v6_9975_0_1, dd_Smed_v6_9975_0_1, [Score=190, Expect=3e-57]} {RNA1509_36754, RNA1509_52631} {RNA1310_23949.1, RNA1509_36754, RNA1509_52631} {RNA1509_36754, RNA1509_52631, RNA815_9887.1}
5. MligTC455_48799 1057 22.02 Mlig455_007337, Mlig455_066655

Neo: Irradiation

Age: -

Region-specific R4: 4.167

Region-enriched R4: 2.282/0.00136

ZDHHC14 1.788 - 0.950 - - - 0.838

Mlig455_007337 {REF} {Length: 1352} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=119.2]} {Human: ENSG00000175048, ZDHHC14, zinc finger DHHC-type containing 14, [Score=183, Expect=2e-53]; ENSG00000188706, ZDHHC9, zinc finger DHHC-type containing 9, [Score=178, Expect=1e-52]; ENSG00000204160, ZDHHC18, zinc finger DHHC-type containing 18, [Score=174, Expect=4e-51]} {Mouse: ENSMUSG00000034265, Zdhhc14, zinc finger, DHHC domain containing 14, [Score=186, Expect=8e-55]; ENSMUSG00000036985, Zdhhc9, zinc finger, DHHC domain containing 9, [Score=179, Expect=5e-53]; ENSMUSG00000037553, Zdhhc18, zinc finger, DHHC domain containing 18, [Score=179, Expect=4e-53]} {Dmel: FBgn0260941, app, approximated, [Score=179, Expect=4e-53]} {Celegans: WBGene00012948, dhhc-2, Palmitoyltransferase, [Score=141, Expect=1e-38]} {Smed: dd_Smed_v6_9975_0_1, dd_Smed_v6_9975_0_1, [Score=168, Expect=4e-49]} {RNA1509_46564} {RNA1310_23949.1} {RNA815_9887.2}

Mlig455_066655 {REF} {Length: 1391} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=121.1]} {Human: ENSG00000175048, ZDHHC14, zinc finger DHHC-type containing 14, [Score=209, Expect=5e-63]; ENSG00000188706, ZDHHC9, zinc finger DHHC-type containing 9, [Score=200, Expect=5e-61]} {Mouse: ENSMUSG00000034265, Zdhhc14, zinc finger, DHHC domain containing 14, [Score=212, Expect=2e-64]} {Dmel: FBgn0260941, app, approximated, [Score=203, Expect=6e-62]} {Celegans: WBGene00012948, dhhc-2, Palmitoyltransferase, [Score=154, Expect=2e-43]} {Smed: dd_Smed_v6_9975_0_1, dd_Smed_v6_9975_0_1, [Score=186, Expect=2e-55]} {RNA1509_46564} {RNA1310_23949.1, RNA1509_46564} {RNA1509_46564, RNA815_9887.1}
6. MligTC455_21006 1192 24.83 Mlig455_066575

Neo: Germline

Age: Up-Down-Up, logFC(26M/2M)=3.813

Region-specific R4: 2.318

Region-enriched R4: 2.883/0.00000

0.968 - 0.968 - - - - Mlig455_066575 {REF} {Length: 529} {NoTransDecoderORF} {RNA1509_2245} {RNA1310_4378} {RNA815_7009}
7. MligTC455_09083 120 2.5 Mlig455_007600

Neo: -

Age: Up-Down-Up

0.953 - - - 0.953 - - Mlig455_007600 {REF} {Length: 2593} {RNA1509_29618} {RNA1310_46079} {RNA815_50544}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA