Data search
Results for MligTC455_20768
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_20768 | 820 | 17.08 | Mlig455_047563 | Neo: - Age: - |
ALDOC | Mlig455_047563 {REF} {Length: 1689} {TRANSSPLICED} {Pfam: Fructose-bisphosphate aldolase class-I [PF00274.21, score=584.4]} {Human: ENSG00000109107, ALDOC, aldolase, fructose-bisphosphate C, [Score=503, Expect=3e-179]; ENSG00000149925, ALDOA, aldolase, fructose-bisphosphate A, [Score=492, Expect=3e-174]; ENSG00000285043, AC093512.2, Homo sapiens aldolase, fructose-bisphosphate A (ALDOA), transcript variant 7, mRNA., [Score=485, Expect=3e-172]} {Mouse: ENSMUSG00000017390, Aldoc, aldolase C, fructose-bisphosphate, [Score=495, Expect=1e-176]; ENSMUSG00000030695, Aldoa, aldolase A, fructose-bisphosphate, [Score=492, Expect=1e-174]; ENSMUSG00000059343, Aldoart1, aldolase 1 A, retrogene 1, [Score=489, Expect=4e-173]; ENSMUSG00000063129, Aldoart2, aldolase 1 A, retrogene 2, [Score=479, Expect=4e-170]} {Dmel: FBgn0000064, Ald, Aldolase, [Score=496, Expect=6e-177]} {Celegans: WBGene00017166, aldo-2, Fructose-bisphosphate aldolase 2, [RH, Score=456, Expect=4e-161]} {Smed: dd_Smed_v6_398_0_1, dd_Smed_v6_398_0_1, [RH, Score=512, Expect=0.0]} {RNA1509_2943, RNA1509_40933} {RNA1310_18157, RNA1509_40933} {RNA1509_40933, RNA815_5965} |
Cumulative graph for MligTC455_20768
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.916 | 4.446 | 0.66659 | 1.00000 | |
| RegionR2 | -0.513 | 4.446 | 0.57989 | 0.93655 | |
| RegionR3 | 0.857 | 4.446 | 0.22529 | 0.76700 | |
| RegionR4 | 1.775 | 4.446 | 0.05738 | 0.21152 | |
| RegionR5 | 1.177 | 4.446 | 0.09312 | 0.29093 | |
| RegionR6 | 0.131 | 4.446 | 0.86589 | 1.00000 | |
| RegionR7 | -0.92 | 4.446 | 0.38933 | 1.00000 | |
| RegionR8 | -1.592 | 4.446 | 0.26729 | 0.89136 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.684 | 4.446 | 0.79037 | 1.00000 | |
| RegenerationR2 | 1.047 | 4.446 | 0.18503 | 0.62715 | |
| RegenerationR3 | 1.182 | 4.446 | 0.17457 | 0.61064 | |
| RegenerationR4 | 1.603 | 4.446 | 0.08118 | 0.45088 | |
| RegenerationR5 | 1.412 | 4.446 | 0.08704 | 0.45450 | |
| RegenerationR6 | 1.415 | 4.446 | 0.09970 | 0.39208 | |
| RegenerationBL | 2.203 | 4.446 | 0.01138 | 0.10861 | |
| RegenerationTP | 2.83 | 4.446 | 0.00551 | 0.12474 |
Genes with expression patterns similar to MligTC455_20768
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_20768 | 820 | 17.08 | Mlig455_047563 | Neo: - Age: - |
ALDOC | 5 | 1.000 | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_047563 {REF} {Length: 1689} {TRANSSPLICED} {Pfam: Fructose-bisphosphate aldolase class-I [PF00274.21, score=584.4]} {Human: ENSG00000109107, ALDOC, aldolase, fructose-bisphosphate C, [Score=503, Expect=3e-179]; ENSG00000149925, ALDOA, aldolase, fructose-bisphosphate A, [Score=492, Expect=3e-174]; ENSG00000285043, AC093512.2, Homo sapiens aldolase, fructose-bisphosphate A (ALDOA), transcript variant 7, mRNA., [Score=485, Expect=3e-172]} {Mouse: ENSMUSG00000017390, Aldoc, aldolase C, fructose-bisphosphate, [Score=495, Expect=1e-176]; ENSMUSG00000030695, Aldoa, aldolase A, fructose-bisphosphate, [Score=492, Expect=1e-174]; ENSMUSG00000059343, Aldoart1, aldolase 1 A, retrogene 1, [Score=489, Expect=4e-173]; ENSMUSG00000063129, Aldoart2, aldolase 1 A, retrogene 2, [Score=479, Expect=4e-170]} {Dmel: FBgn0000064, Ald, Aldolase, [Score=496, Expect=6e-177]} {Celegans: WBGene00017166, aldo-2, Fructose-bisphosphate aldolase 2, [RH, Score=456, Expect=4e-161]} {Smed: dd_Smed_v6_398_0_1, dd_Smed_v6_398_0_1, [RH, Score=512, Expect=0.0]} {RNA1509_2943, RNA1509_40933} {RNA1310_18157, RNA1509_40933} {RNA1509_40933, RNA815_5965} |
| 2. | MligTC455_14768 | 263 | 5.47 | Mlig455_066020 | Neo: - Age: - Region-enriched R4: 6.840/0.00000 |
1.71 | - | - | - | 0.758 | - | 0.952 | Mlig455_066020 {REF} {Length: 1764} {Pfam: F5/8 type C domain [PF00754.27, score=68.1]} {Dmel: FBgn0030617, CG9095, [Score=52.4, Expect=6e-07]} {Smed: dd_Smed_v6_71482_0_1, dd_Smed_v6_71482_0_1, [RH, Score=65.9, Expect=2e-12]} {RNA1509_11049} {RNA1310_13321.1} {RNA815_5230.1} | |
| 3. | MligTC455_28897 | 308 | 6.42 | Mlig455_030032 | Neo: - Age: Up-Up-Up, logFC(26M/2M)=1.123 Region-enriched R3: 2.756/0.00353 |
URGCP | 0.966 | - | - | - | - | - | 0.966 | Mlig455_030032 {REF} {Length: 7627} {TRANSSPLICED} {Pfam: Root hair defective 3 GTP-binding protein (RHD3) [PF05879.14, score=27.6]; Dynamin family [PF00350.25, score=22.0]; 50S ribosome-binding GTPase [PF01926.25, score=20.2]; Guanylate-binding protein, N-terminal domain [PF02263.21, score=19.7]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=116, Expect=1e-25]} {Mouse: ENSMUSG00000078606, Gm4070, predicted gene 4070, [Score=515, Expect=5e-151]; ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [Score=513, Expect=2e-150]} {RNA1509_16396} {RNA1310_766.1} {RNA815_2094.1} |
| 4. | MligTC455_02589 | 124 | 2.59 | Mlig455_027271 | Neo: - |
MX1 | 0.965 | - | - | - | - | - | 0.965 | Mlig455_027271 {REF} {Length: 4609} {Pfam: Dynamin central region [PF01031.22, score=152.2]; Dynamin GTPase effector domain [PF02212.20, score=57.4]; Family with sequence similarity 184, A and B [PF15665.7, score=20.6]} {Human: ENSG00000157601, MX1, MX dynamin like GTPase 1, [Score=136, Expect=2e-34]; ENSG00000183486, MX2, MX dynamin like GTPase 2, [Score=132, Expect=4e-33]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [Score=144, Expect=3e-37]} {RNA1509_19894, RNA1509_52436, RNA1509_54554, RNA1509_8812} {RNA1310_1482.2, RNA1509_19894, RNA1509_52436, RNA1509_54554, RNA1509_8812} {RNA1509_19894, RNA1509_52436, RNA1509_54554, RNA1509_8812, RNA815_3194} |
| 5. | MligTC455_53924 | 345 | 7.18 | Mlig455_031500, Mlig455_031504 | Neo: - Age: Up-Down-Down Region-enriched R3: 2.512/0.02739 |
MGAM, MGAM2 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_031500 {REF} {Length: 6467} {TRANSSPLICED} {Pfam: Glycosyl hydrolases family 31 [PF01055.28, score=771.4]; N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase [PF16863.7, score=128.0]; Trefoil (P-type) domain [PF00088.20, score=47.5]; Galactose mutarotase-like [PF13802.8, score=46.7]} {Human: ENSG00000282607, MGAM, maltase-glucoamylase, [RH, Score=969, Expect=0.0]; ENSG00000257335, MGAM, maltase-glucoamylase, [RH, Score=969, Expect=0.0]; ENSG00000090402, SI, sucrase-isomaltase, [RH, Score=942, Expect=0.0]} {Mouse: ENSMUSG00000068587, Mgam, maltase-glucoamylase, [RH, Score=969, Expect=0.0]; ENSMUSG00000027790, Sis, sucrase isomaltase (alpha-glucosidase), [RH, Score=952, Expect=0.0]} {Dmel: FBgn0027588, GCS2alpha, Glucosidase 2 alpha subunit, [Score=188, Expect=3e-48]} {Celegans: WBGene00019895, aagr-2, Acid Alpha Glucosidase Relate, [RH, Score=482, Expect=4e-147]} {Smed: dd_Smed_v6_1062_0_1, dd_Smed_v6_1062_0_1, [Score=466, Expect=1e-142]} {RNA1509_3169} {RNA1310_1135} {RNA815_4014} Mlig455_031504 {REF} {Length: 414} {Human: ENSG00000257743, MGAM2, maltase-glucoamylase 2 (putative), [Score=71.6, Expect=6e-15]; ENSG00000278563, MGAM2, maltase-glucoamylase 2 (putative), [Score=71.6, Expect=6e-15]; ENSG00000257335, MGAM, maltase-glucoamylase, [Score=70.1, Expect=2e-14]; ENSG00000282607, MGAM, maltase-glucoamylase, [Score=69.7, Expect=3e-14]} {Mouse: ENSMUSG00000068587, Mgam, maltase-glucoamylase, [Score=68.2, Expect=7e-14]} {Celegans: WBGene00019895, aagr-2, Acid Alpha Glucosidase Relate, [Score=73.9, Expect=3e-16]} {Smed: dd_Smed_v6_1062_0_2, dd_Smed_v6_1062_0_2, [Score=58.5, Expect=6e-11]} {RNA1509_3169} {RNA1310_1135} {RNA815_943} |
| 6. | MligTC455_43722 | 889 | 18.52 | Mlig455_066637 | Neo: - Age: - Region-enriched R4: 1.670/0.03939 |
0.961 | - | - | - | - | - | 0.961 | Mlig455_066637 {REF} {Length: 3656} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1295) [PF06966.14, score=191.4]; 3-oxo-5-alpha-steroid 4-dehydrogenase [PF02544.18, score=27.0]; Phospholipid methyltransferase [PF04191.15, score=21.1]; Isoprenylcysteine carboxyl methyltransferase (ICMT) family [PF04140.16, score=20.9]} {Dmel: FBgn0035914, CG6282, [RH, Score=167, Expect=2e-49]} {Smed: dd_Smed_v6_14327_0_1, dd_Smed_v6_14327_0_1, [RH, Score=156, Expect=1e-45]} {RNA1509_17541, RNA1509_24503, RNA1509_27200, RNA1509_30241, RNA1509_35384, RNA1509_45024, RNA1509_59986, RNA1509_8023} {RNA1310_33212, RNA1509_17541, RNA1509_24503, RNA1509_27200, RNA1509_30241, RNA1509_45024, RNA1509_59986, RNA1509_8023} {RNA1509_17541, RNA1509_24503, RNA1509_27200, RNA1509_30241, RNA1509_45024, RNA1509_59986, RNA1509_8023, RNA815_13020.1} | |
| 7. | MligTC455_10803 | 909 | 18.94 | Mlig455_058706 | Neo: - Age: logFC(26M/2M)=0.227 |
PLSCR1 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_058706 {REF} {Length: 2803} {TRANSSPLICED} {Pfam: Scramblase [PF03803.17, score=254.5]} {Human: ENSG00000188313, PLSCR1, phospholipid scramblase 1, [Score=239, Expect=8e-79]} {Mouse: ENSMUSG00000032369, Plscr1, phospholipid scramblase 1, [Score=229, Expect=1e-74]; ENSMUSG00000032372, Plscr2, phospholipid scramblase 2, [Score=219, Expect=3e-71]} {Dmel: FBgn0052056, scramb1, scramblase 1, [Score=214, Expect=2e-70]} {Celegans: WBGene00011935, scrm-1, Phospholipid scramblase, [Score=215, Expect=3e-70]} {Smed: dd_Smed_v6_4899_0_1, dd_Smed_v6_4899_0_1, [Score=341, Expect=2e-119]} {RNA1509_44870} {RNA1310_2406.1} {RNA815_10221} |
| 8. | MligTC455_30087 | 780 | 16.24 | Mlig455_025138 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.378 Region-specific R3: 2.169 Region-enriched R3: 1.726/0.00000 |
0.952 | - | - | - | - | - | 0.952 | Mlig455_025138 {REF} {Length: 2141} {RNA1509_10776, RNA1509_22375} {RNA1310_13617, RNA1509_10776, RNA1509_22375} {RNA1509_10776, RNA1509_22375, RNA815_8374.1} |
Berezikov Lab - 2020-2021 © ERIBA