TomoSeq data search

Data search

Results for MligTC455_20787

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_20787	42	0.86	Mlig455_043188	Neo: - Age: - Region-enriched R4: 5.373/0.00952		Mlig455_043188 {REF} {Length: 5311} {RNA1509_14239} {RNA1310_5913.1} {RNA815_3696}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_20787

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.826	1.032	1.00000	1.00000
RegionR2	-1.148	1.032	0.95877	1.00000
RegionR3	1.159	1.032	0.33127	0.86921
RegionR4	5.373	1.032	0.00089	0.00952
RegionR5	1.133	1.032	0.29839	0.63285
RegionR6	-0.418	1.032	0.83126	1.00000
RegionR7	0.582	1.032	0.69645	1.00000
RegionR8	-3.853	1.032	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.419	1.032	1.00000	1.00000
RegenerationR2	0.453	1.032	0.78966	0.98613
RegenerationR3	-2.93	1.032	0.04198	0.35930
RegenerationR4	-3.919	1.032	0.01006	0.15163
RegenerationR5	-3.575	1.032	0.01009	0.17759
RegenerationR6	-0.543	1.032	0.69646	0.92232
RegenerationBL	-2.282	1.032	1.00000	1.00000
RegenerationTP	-2.437	1.032	0.99977	1.00000

Genes with expression patterns similar to MligTC455_20787

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_20787	42	0.86	Mlig455_043188	Neo: - Age: - Region-enriched R4: 5.373/0.00952		3	1.000	1.000	-	1.000	-	-	Mlig455_043188 {REF} {Length: 5311} {RNA1509_14239} {RNA1310_5913.1} {RNA815_3696}
2.	MligTC455_29333	69	1.44	Mlig455_055564	Neo: - Age: -	PTPRT	0.955	-	-	-	0.955	-	-	Mlig455_055564 {REF} {Length: 5632} {TRANSSPLICED} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=270.3]; Fibronectin type III domain [PF00041.23, score=65.5]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=18.9]} {Human: ENSG00000196090, PTPRT, protein tyrosine phosphatase, receptor type T, [Score=269, Expect=2e-72]; ENSG00000153707, PTPRD, protein tyrosine phosphatase, receptor type D, [Score=257, Expect=1e-68]; ENSG00000282932, PTPRD, protein tyrosine phosphatase, receptor type D, [Score=257, Expect=1e-68]} {Mouse: ENSMUSG00000053141, Ptprt, protein tyrosine phosphatase, receptor type, T, [Score=267, Expect=4e-72]; ENSMUSG00000028399, Ptprd, protein tyrosine phosphatase, receptor type, D, [Score=258, Expect=3e-69]} {Dmel: FBgn0000464, Lar, Leukocyte-antigen-related-like, [Score=207, Expect=2e-53]} {Celegans: WBGene00004215, ptp-3, Tyrosine-protein phosphatase Lar-like, [Score=168, Expect=1e-41]} {Smed: dd_Smed_v6_10176_0_1, dd_Smed_v6_10176_0_1, [Score=201, Expect=9e-52]} {RNA1509_56330, RNA1509_58528} {RNA1310_671.1, RNA1509_58528} {RNA1509_58528, RNA815_239}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_20787

0.86

Mlig455_043188

Neo: -

Age: -

Region-enriched R4: 5.373/0.00952

1.000

Mlig455_043188 {REF} {Length: 5311} {RNA1509_14239} {RNA1310_5913.1} {RNA815_3696}

MligTC455_29333

1.44

Mlig455_055564

Neo: -

Age: -

PTPRT

0.955

Mlig455_055564 {REF} {Length: 5632} {TRANSSPLICED} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=270.3]; Fibronectin type III domain [PF00041.23, score=65.5]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=18.9]} {Human: ENSG00000196090, PTPRT, protein tyrosine phosphatase, receptor type T, [Score=269, Expect=2e-72]; ENSG00000153707, PTPRD, protein tyrosine phosphatase, receptor type D, [Score=257, Expect=1e-68]; ENSG00000282932, PTPRD, protein tyrosine phosphatase, receptor type D, [Score=257, Expect=1e-68]} {Mouse: ENSMUSG00000053141, Ptprt, protein tyrosine phosphatase, receptor type, T, [Score=267, Expect=4e-72]; ENSMUSG00000028399, Ptprd, protein tyrosine phosphatase, receptor type, D, [Score=258, Expect=3e-69]} {Dmel: FBgn0000464, Lar, Leukocyte-antigen-related-like, [Score=207, Expect=2e-53]} {Celegans: WBGene00004215, ptp-3, Tyrosine-protein phosphatase Lar-like, [Score=168, Expect=1e-41]} {Smed: dd_Smed_v6_10176_0_1, dd_Smed_v6_10176_0_1, [Score=201, Expect=9e-52]} {RNA1509_56330, RNA1509_58528} {RNA1310_671.1, RNA1509_58528} {RNA1509_58528, RNA815_239}