TomoSeq data search

Data search

Results for MligTC455_20863

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_20863

2500

52.08

Mlig455_014755

Neo: -

Age: logFC(26M/2M)=-0.213

CASP3

Mlig455_014755 {REF} {Length: 1648} {TRANSSPLICED} {Pfam: Caspase domain [PF00656.24, score=134.0]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=212, Expect=4e-67]; ENSG00000165806, CASP7, caspase 7, [Score=209, Expect=1e-65]} {Mouse: ENSMUSG00000025076, Casp7, caspase 7, [Score=206, Expect=9e-65]; ENSMUSG00000031628, Casp3, caspase 3, [Score=200, Expect=1e-62]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=188, Expect=3e-57]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=131, Expect=4e-36]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=162, Expect=2e-48]} {RNA1509_12614, RNA1509_26170, RNA1509_40788, RNA1509_8672} {RNA1310_32950.1, RNA1509_12614, RNA1509_26170, RNA1509_40788, RNA1509_8672} {RNA1509_12614, RNA1509_26170, RNA1509_40788, RNA1509_8672, RNA815_12370.1}

Cumulative graph for MligTC455_20863

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.042	5.872	0.11732	0.70548
RegionR2	0.076	5.872	0.82100	1.00000
RegionR3	0.082	5.872	0.77360	1.00000
RegionR4	0.828	5.872	0.01440	0.08000
RegionR5	0.535	5.872	0.04544	0.17492
RegionR6	0.53	5.872	0.05580	0.44313
RegionR7	-0.185	5.872	0.56175	1.00000
RegionR8	-0.824	5.872	0.03400	0.36261

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.712	5.872	0.49614	1.00000
RegenerationR2	-0.252	5.872	0.44094	0.84048
RegenerationR3	-0.513	5.872	0.14085	0.56691
RegenerationR4	-0.665	5.872	0.06663	0.41163
RegenerationR5	-0.569	5.872	0.09189	0.46533
RegenerationR6	-1.141	5.872	0.00140	0.04173
RegenerationBL	-0.479	5.872	0.19093	0.52506
RegenerationTP	0.376	5.872	0.32141	0.76591

Genes with expression patterns similar to MligTC455_20863

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_20863	2500	52.08	Mlig455_014755	Neo: - Age: logFC(26M/2M)=-0.213	CASP3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_014755 {REF} {Length: 1648} {TRANSSPLICED} {Pfam: Caspase domain [PF00656.24, score=134.0]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=212, Expect=4e-67]; ENSG00000165806, CASP7, caspase 7, [Score=209, Expect=1e-65]} {Mouse: ENSMUSG00000025076, Casp7, caspase 7, [Score=206, Expect=9e-65]; ENSMUSG00000031628, Casp3, caspase 3, [Score=200, Expect=1e-62]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=188, Expect=3e-57]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=131, Expect=4e-36]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=162, Expect=2e-48]} {RNA1509_12614, RNA1509_26170, RNA1509_40788, RNA1509_8672} {RNA1310_32950.1, RNA1509_12614, RNA1509_26170, RNA1509_40788, RNA1509_8672} {RNA1509_12614, RNA1509_26170, RNA1509_40788, RNA1509_8672, RNA815_12370.1}
2.	MligTC455_26292	420	8.75	Mlig455_061611	Neo: - Age: Down-Up-Down Region-enriched R4: 2.232/0.02048	SH3GL3	0.975	-	-	-	-	0.975	-	Mlig455_061611 {REF} {Length: 2579} {TRANSSPLICED} {Pfam: BAR domain [PF03114.20, score=175.4]; Variant SH3 domain [PF14604.8, score=52.4]; SH3 domain [PF00018.30, score=49.5]; Variant SH3 domain [PF07653.19, score=43.5]; Bin/amphiphysin/Rvs domain for vesicular trafficking [PF10455.11, score=42.9]; BAR domain of APPL family [PF16746.7, score=19.2]} {Human: ENSG00000140600, SH3GL3, SH3 domain containing GRB2 like 3, endophilin A3, [Score=294, Expect=8e-98]; ENSG00000141985, SH3GL1, SH3 domain containing GRB2 like 1, endophilin A2, [Score=290, Expect=4e-96]; ENSG00000107295, SH3GL2, SH3 domain containing GRB2 like 2, endophilin A1, [Score=286, Expect=1e-94]} {Mouse: ENSMUSG00000030638, Sh3gl3, SH3-domain GRB2-like 3, [RH, Score=289, Expect=1e-96]} {Dmel: FBgn0038659, EndoA, Endophilin A, [Score=285, Expect=2e-94]} {Celegans: WBGene00006791, unc-57, Endophilin-A homolog, [Score=288, Expect=2e-95]} {Smed: dd_Smed_v6_6372_0_1, dd_Smed_v6_6372_0_1, [Score=325, Expect=3e-110]} {RNA1509_12847, RNA1509_35949, RNA1509_45805} {RNA1310_590.2, RNA1509_35949, RNA1509_45805} {RNA1509_35949, RNA1509_45805, RNA815_3052.1}
3.	MligTC455_46348	246	5.12	Mlig455_023022, Mlig455_023167	Neo: - Age: -	ELOF1	0.957	-	-	-	-	0.957	-	Mlig455_023022 {REF} {Length: 1062} {TRANSSPLICED} {Pfam: Transcription elongation factor Elf1 like [PF05129.15, score=104.0]} {Human: ENSG00000130165, ELOF1, elongation factor 1 homolog, [RH, Score=102, Expect=2e-29]} {Mouse: ENSMUSG00000013822, Elof1, ELF1 homolog, elongation factor 1, [RH, Score=101, Expect=1e-29]} {Dmel: FBgn0063670, CG40228, [RH, Score=133, Expect=2e-42]} {Celegans: WBGene00013219, Y54G11A.11, Transcription elongation factor 1 homolog, [RH, Score=134, Expect=6e-43]} {Smed: dd_Smed_v6_3505_0_1, dd_Smed_v6_3505_0_1, [RH, Score=122, Expect=2e-38]} {RNA1509_9167} {RNA1310_32925} {RNA815_15186.1} Mlig455_023167 {REF} {Length: 1061} {TRANSSPLICED} {Pfam: Transcription elongation factor Elf1 like [PF05129.15, score=104.0]} {Human: ENSG00000130165, ELOF1, elongation factor 1 homolog, [RH, Score=102, Expect=2e-29]} {Mouse: ENSMUSG00000013822, Elof1, ELF1 homolog, elongation factor 1, [RH, Score=101, Expect=1e-29]} {Dmel: FBgn0063670, CG40228, [RH, Score=133, Expect=2e-42]} {Celegans: WBGene00013219, Y54G11A.11, Transcription elongation factor 1 homolog, [RH, Score=134, Expect=6e-43]} {Smed: dd_Smed_v6_3505_0_1, dd_Smed_v6_3505_0_1, [RH, Score=122, Expect=2e-38]} {RNA1509_9167} {RNA1310_32925} {RNA815_15186.1}
4.	MligTC455_14210	108	2.25	Mlig455_060739	Neo: Int S/G2/M Age: Down-Up-Down		0.951	-	-	-	-	0.951	-	Mlig455_060739 {REF} {Length: 1276} {RNA1509_42122} {RNA1310_19443} {RNA815_21271}
5.	MligTC455_47239	197	4.11	Mlig455_010867	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_010867 {REF} {Length: 569} {NoTransDecoderORF} {RNA1509_22398} {RNA1310_25370}

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