Data search
Results for MligTC455_20870
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_20870 | 204 | 4.25 | Mlig455_029583 | Neo: - Age: Down-Down-Up Region-enriched R4: 3.171/0.03285 |
Mlig455_029583 {REF} {Length: 1123} {RNA1509_34788} {RNA1310_30447} {RNA815_14427} |
Cumulative graph for MligTC455_20870
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.044 | 2.624 | 0.99949 | 1.00000 | |
| RegionR2 | -0.017 | 2.624 | 0.81438 | 1.00000 | |
| RegionR3 | 1.057 | 2.624 | 0.31575 | 0.85499 | |
| RegionR4 | 3.171 | 2.624 | 0.00439 | 0.03285 | |
| RegionR5 | 2.083 | 2.624 | 0.03931 | 0.15744 | |
| RegionR6 | 1.451 | 2.624 | 0.18178 | 0.74580 | |
| RegionR7 | 0.358 | 2.624 | 0.69845 | 1.00000 | |
| RegionR8 | -5.059 | 2.624 | 0.13907 | 0.68113 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -3.779 | 2.624 | 0.58420 | 1.00000 | |
| RegenerationR2 | -0.317 | 2.624 | 0.73164 | 0.96608 | |
| RegenerationR3 | 0.214 | 2.624 | 0.80927 | 0.98466 | |
| RegenerationR4 | 0.609 | 2.624 | 0.51666 | 0.87832 | |
| RegenerationR5 | 0.018 | 2.624 | 0.95112 | 1.00000 | |
| RegenerationR6 | 0.443 | 2.624 | 0.66836 | 0.90801 | |
| RegenerationBL | 1.053 | 2.624 | 0.50576 | 0.86943 | |
| RegenerationTP | 3.429 | 2.624 | 0.08073 | 0.45174 |
Genes with expression patterns similar to MligTC455_20870
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_20870 | 204 | 4.25 | Mlig455_029583 | Neo: - Age: Down-Down-Up Region-enriched R4: 3.171/0.03285 |
5 | - | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_029583 {REF} {Length: 1123} {RNA1509_34788} {RNA1310_30447} {RNA815_14427} | |
| 2. | MligTC455_20871 | 552 | 11.49 | Mlig455_061518, Mlig455_070661 | Neo: - Age: Down-Down-Up Region-enriched R4: 2.603/0.00738 |
3.609 | - | 0.957 | 0.892 | 0.797 | 0.963 | - | Mlig455_061518 {REF} {Length: 1196} {RNA1509_34788} {RNA1310_30447} {RNA815_14427} Mlig455_070661 {REF} {Length: 1146} {RNA1509_34788} {RNA1310_30447, RNA1509_34788} {RNA1509_34788, RNA815_14427} |
|
| 3. | MligTC455_51391 | 36 | 0.75 | Mlig455_010711 | Neo: - Age: - |
0.978 | - | - | - | 0.978 | - | - | Mlig455_010711 {REF} {Length: 2180} {NoTransDecoderORF} {RNA1509_40957} {RNA1310_20727.1} {RNA815_16253.1} | |
| 4. | MligTC455_27385 | 1241 | 25.86 | Mlig455_035188 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.298 |
0.962 | - | - | - | 0.962 | - | - | Mlig455_035188 {REF} {Length: 2750} {TRANSSPLICED} {Pfam: Mitochondrial fission regulator [PF05308.13, score=36.1]} {RNA1509_8038} {RNA1310_16622, RNA1509_8038} {RNA1509_8038, RNA815_23974} | |
| 5. | MligTC455_07345 | 22 | 0.46 | Mlig455_048875 | Neo: - Age: Down-Up-Up |
FLVCR2 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_048875 {REF} {Length: 1646} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=105.9]; Sugar (and other) transporter [PF00083.26, score=29.0]} {Human: ENSG00000119686, FLVCR2, feline leukemia virus subgroup C cellular receptor family member 2, [RH, Score=355, Expect=4e-117]; ENSG00000162769, FLVCR1, feline leukemia virus subgroup C cellular receptor 1, [RH, Score=345, Expect=3e-113]} {Mouse: ENSMUSG00000034258, Flvcr2, feline leukemia virus subgroup C cellular receptor 2, [RH, Score=367, Expect=6e-122]} {Dmel: FBgn0033196, CG1358, [RH, Score=366, Expect=2e-122]} {Celegans: WBGene00015632, C09D4.1, Uncharacterized MFS-type transporter C09D4.1, [RH, Score=376, Expect=2e-126]} {Smed: dd_Smed_v6_7578_0_1, dd_Smed_v6_7578_0_1, [RH, Score=365, Expect=2e-122]} {RNA1310_13875} {RNA815_15816} |
| 6. | MligTC455_25606 | 1297 | 27.02 | Mlig455_022993, Mlig455_023085 | Neo: - Age: Down-Up-Down Region-enriched R4: 2.033/0.00096 |
0.955 | - | - | - | - | 0.955 | - | Mlig455_022993 {REF} {Length: 1567} {RNA1509_27673} {RNA1310_14600} {RNA815_8172} Mlig455_023085 {REF} {Length: 1748} {RNA1509_10315, RNA1509_26596, RNA1509_27673, RNA1509_50750} {RNA1310_14600, RNA1509_10315, RNA1509_26596, RNA1509_27673, RNA1509_50750} {RNA1509_10315, RNA1509_26596, RNA1509_27673, RNA1509_50750, RNA815_8172} |
|
| 7. | MligTC455_21090 | 421 | 8.77 | Mlig455_014954 | Neo: - Age: logFC(26M/2M)=-0.316 |
TRPM1 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_014954 {REF} {Length: 4595} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=64.3]; Ankyrin repeats (many copies) [PF13637.8, score=58.9]; Ankyrin repeats (many copies) [PF13857.8, score=52.6]; Ion transport protein [PF00520.33, score=47.9]; Ankyrin repeat [PF13606.8, score=39.1]; Ankyrin repeat [PF00023.32, score=35.0]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=168, Expect=2e-41]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=168, Expect=1e-41]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=160, Expect=3e-39]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=163, Expect=3e-40]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=160, Expect=4e-39]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=125, Expect=1e-28]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=90.9, Expect=4e-18]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=188, Expect=1e-48]} {RNA1509_3562} {RNA1310_2118.1} {RNA815_362.1} |
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