M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_20897

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_20897 308 6.42 Mlig455_003823

Neo: -

Age: -

 RAC1 Mlig455_003823 {REF} {Length: 1789} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=175.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=81.0]; ADP-ribosylation factor family [PF00025.23, score=31.4]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=277, Expect=1e-95]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=276, Expect=4e-95]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=264, Expect=1e-90]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=277, Expect=9e-96]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=274, Expect=1e-94]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=264, Expect=1e-90]} {Dmel: FBgn0010333, Rac1, [Score=276, Expect=2e-95]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=269, Expect=5e-93]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=251, Expect=4e-86]} {RNA1509_26483} {RNA1310_15901, RNA1509_26483} {RNA1509_26483, RNA815_9219}

Cumulative graph for MligTC455_20897

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.632 2.968 0.68318 1.00000
RegionR2 1.596 2.968 0.00851 0.09114
RegionR3 -0.057 2.968 0.92138 1.00000
RegionR4 -1.263 2.968 0.04501 0.17960
RegionR5 -0.378 2.968 0.46509 0.82715
RegionR6 0.144 2.968 0.79505 1.00000
RegionR7 0.234 2.968 0.75895 1.00000
RegionR8 0.356 2.968 0.70379 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.027 2.968 0.57407 1.00000
RegenerationR2 -0.599 2.968 0.21925 0.66695
RegenerationR3 0.202 2.968 0.73621 0.95944
RegenerationR4 0.506 2.968 0.39308 0.80933
RegenerationR5 0.56 2.968 0.30582 0.73308
RegenerationR6 -0.736 2.968 0.25935 0.60958
RegenerationBL -0.436 2.968 0.56772 0.92165
RegenerationTP 0.52 2.968 0.49418 0.89775


Genes with expression patterns similar to MligTC455_20897

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_20897 308 6.42 Mlig455_003823

Neo: -

Age: -

 RAC1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_003823 {REF} {Length: 1789} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=175.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=81.0]; ADP-ribosylation factor family [PF00025.23, score=31.4]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=277, Expect=1e-95]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=276, Expect=4e-95]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=264, Expect=1e-90]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=277, Expect=9e-96]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=274, Expect=1e-94]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=264, Expect=1e-90]} {Dmel: FBgn0010333, Rac1, [Score=276, Expect=2e-95]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=269, Expect=5e-93]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=251, Expect=4e-86]} {RNA1509_26483} {RNA1310_15901, RNA1509_26483} {RNA1509_26483, RNA815_9219}
2. MligTC455_17464 409 8.52 Mlig455_048989, Mlig455_049006, Mlig455_067762

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.512

Regeneration-downregulated BL: -7.800

Regeneration-depleted BL: -7.800

 1.876 0.906 0.970 - - - -

Mlig455_048989 {REF} {Length: 1272} {RNA1310_37715} {RNA815_39767}

Mlig455_049006 {REF} {Length: 1028} {RNA1310_37715} {RNA815_39767}

Mlig455_067762 {REF} {Length: 1353} {RNA1310_37715} {RNA815_39767}
3. MligTC455_48063 63 1.31 Mlig455_046268

Neo: -

Age: -

Region-enriched R2: 5.256/0.00170

 1.847 - 0.893 0.954 - - - Mlig455_046268 {REF} {Length: 749} {RNA1310_88363} {RNA815_47885}
4. MligTC455_34414 139 2.9 Mlig455_044232, Mlig455_044249

Neo: -

Age: -

 C1GALT1 1.84 - - 0.955 0.885 - -

Mlig455_044232 {REF} {Length: 1411} {Pfam: Fringe-like [PF02434.18, score=40.9]; Galactosyltransferase [PF01762.23, score=24.6]} {Human: ENSG00000106392, C1GALT1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=188, Expect=8e-57]} {Mouse: ENSMUSG00000042460, C1galt1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1, [Score=184, Expect=2e-55]} {Dmel: FBgn0031468, CG2975, [Score=174, Expect=2e-51]} {Celegans: WBGene00008019, C38H2.2, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=194, Expect=4e-59]} {Smed: dd_Smed_v6_4310_0_1, dd_Smed_v6_4310_0_1, [Score=204, Expect=1e-63]} {RNA1310_37815} {RNA815_40424}

Mlig455_044249 {REF} {Length: 1563} {Pfam: Fringe-like [PF02434.18, score=39.1]; Galactosyltransferase [PF01762.23, score=22.8]} {Human: ENSG00000106392, C1GALT1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=191, Expect=2e-55]} {Mouse: ENSMUSG00000042460, C1galt1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1, [Score=185, Expect=1e-53]} {Dmel: FBgn0031468, CG2975, [Score=176, Expect=3e-50]} {Celegans: WBGene00008019, C38H2.2, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=206, Expect=1e-61]} {Smed: dd_Smed_v6_4310_0_1, dd_Smed_v6_4310_0_1, [Score=207, Expect=2e-62]} {RNA1310_37815} {RNA815_40424}
5. MligTC455_43962 120 2.5 Mlig455_020783

Neo: -

Age: -

 TRAF5 1.81 - 0.951 0.859 - - - Mlig455_020783 {REF} {Length: 3242} {Human: ENSG00000082512, TRAF5, TNF receptor associated factor 5, [Score=90.5, Expect=3e-20]} {Mouse: ENSMUSG00000026637, Traf5, TNF receptor-associated factor 5, [Score=88.6, Expect=1e-20]; ENSMUSG00000111385, Traf5, TNF receptor-associated factor 5, [Score=88.6, Expect=1e-20]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=70.9, Expect=6e-14]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=99.0, Expect=8e-24]} {Smed: dd_Smed_v6_13517_0_1, dd_Smed_v6_13517_0_1, [Score=132, Expect=8e-36]} {RNA1310_36792.1} {RNA815_40908}
6. MligTC455_46341 243 5.06 Mlig455_052880, Mlig455_052884

Neo: -

Age: -

 1.767 - 0.812 0.955 - - -

Mlig455_052880 {REF} {Length: 1228} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=28.6]; Dpy-30 motif [PF05186.15, score=22.0]; Ankyrin repeats (many copies) [PF13637.8, score=20.9]} {Smed: dd_Smed_v6_29956_0_1, dd_Smed_v6_29956_0_1, [Score=60.5, Expect=6e-10]} {RNA1509_39973} {RNA1310_21889} {RNA815_13094}

Mlig455_052884 {REF} {Length: 1926} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=39.4]; Ankyrin repeats (many copies) [PF13637.8, score=27.7]; Ankyrin repeats (many copies) [PF13857.8, score=24.6]; Dpy-30 motif [PF05186.15, score=21.6]} {Smed: dd_Smed_v6_29956_0_1, dd_Smed_v6_29956_0_1, [Score=72.8, Expect=1e-13]} {RNA1509_39973} {RNA1310_21889, RNA1509_39973} {RNA1509_39973, RNA815_13094}
7. MligTC455_51446 559 11.64 Mlig455_026623

Neo: -

Age: -

 1.763 - - - 0.962 0.801 - Mlig455_026623 {REF} {Length: 1879} {RNA1509_20584, RNA1509_59249} {RNA1310_9709.1, RNA1509_59249} {RNA1509_59249, RNA815_5646}
8. MligTC455_23448 215 4.48 Mlig455_035040

Neo: -

Age: -

 CC2D2A 1.756 0.803 - 0.953 - - - Mlig455_035040 {REF} {Length: 2196} {Human: ENSG00000048342, CC2D2A, coiled-coil and C2 domain containing 2A, [Score=169, Expect=2e-44]} {Mouse: ENSMUSG00000039765, Cc2d2a, coiled-coil and C2 domain containing 2A, [Score=175, Expect=9e-47]} {Dmel: FBgn0263113, Cc2d2a, Coiled-coil and C2 domain containing 2A, [Score=61.6, Expect=1e-09]} {Celegans: WBGene00010642, mks-6, MecKel-Gruber Syndrome (MKS) homolog, [Score=53.1, Expect=4e-07]} {Smed: dd_Smed_v6_11189_0_1, dd_Smed_v6_11189_0_1, [Score=184, Expect=5e-50]} {RNA1509_46603} {RNA1310_29413.1} {RNA815_316.1}
9. MligTC455_16001 122 2.55 Mlig455_010422

Neo: -

Age: -

Region-enriched R7: 2.453/0.01782

 0.975 - - - 0.975 - - Mlig455_010422 {REF} {Length: 3200} {Pfam: Domain of unknown function (DUF3827) [PF12877.9, score=33.0]} {RNA1310_5480} {RNA815_22680}
10. MligTC455_04162 131 2.73 Mlig455_028924

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.575

 HMCN1 0.966 - - 0.966 - - - Mlig455_028924 {REF} {Length: 3929} {Pfam: Immunoglobulin domain [PF13927.8, score=144.9]; Immunoglobulin I-set domain [PF07679.18, score=119.8]; Immunoglobulin domain [PF13895.8, score=113.4]; Immunoglobulin domain [PF00047.27, score=102.3]; Immunoglobulin V-set domain [PF07686.19, score=36.7]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=35.3]; Immunoglobulin C1-set domain [PF07654.17, score=23.3]; C17orf99 Ig domain [PF17736.3, score=20.9]; Immunoglobulin domain [PF18452.3, score=19.8]} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=103, Expect=2e-21]; ENSG00000148357, HMCN2, hemicentin 2, [Score=100, Expect=8e-21]} {Mouse: ENSMUSG00000051747, Ttn, titin, [Score=107, Expect=5e-23]; ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=103, Expect=7e-22]} {Dmel: FBgn0000547, ed, echinoid, [Score=147, Expect=2e-35]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=100, Expect=3e-21]} {Smed: dd_Smed_v6_13903_0_1, dd_Smed_v6_13903_0_1, [Score=162, Expect=2e-40]} {RNA1310_26618} {RNA815_41641}
11. MligTC455_47307 449 9.35 Mlig455_064906

Neo: -

Age: logFC(26M/2M)=-0.300

Region-enriched R4: 2.462/0.03750

 PNPO 0.966 - - 0.966 - - - Mlig455_064906 {REF} {Length: 1936} {TRANSSPLICED} {Pfam: Pyridoxamine 5'-phosphate oxidase [PF01243.22, score=86.5]; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region [PF10590.11, score=67.1]; Pyridoxamine 5'-phosphate oxidase [PF12766.9, score=29.1]} {Human: ENSG00000108439, PNPO, pyridoxamine 5'-phosphate oxidase, [RH, Score=192, Expect=2e-60]} {Mouse: ENSMUSG00000018659, Pnpo, pyridoxine 5'-phosphate oxidase, [RH, Score=191, Expect=4e-60]} {Dmel: FBgn0051472, sgll, sugarlethal, [RH, Score=184, Expect=9e-58]} {Celegans: WBGene00018996, F57B9.1, Putative pyridoxamine 5'-phosphate oxidase, [Score=181, Expect=7e-57]} {Smed: dd_Smed_v6_5086_0_1, dd_Smed_v6_5086_0_1, [RH, Score=182, Expect=2e-57]} {RNA1509_3472} {RNA1310_16067} {RNA815_7134}
12. MligTC455_28967 238 4.95 Mlig455_016945, Mlig455_029393

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.360

 PRR9 0.964 - - 0.964 - - -

Mlig455_016945 {REF} {Length: 614} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=50.4, Expect=4e-08]} {Celegans: WBGene00018026, F35A5.4, [Score=60.1, Expect=5e-11]}

Mlig455_029393 {REF} {Length: 2107} {Celegans: WBGene00018026, F35A5.4, [Score=51.2, Expect=2e-06]} {RNA1509_35570} {RNA1310_22735} {RNA815_10186}
13. MligTC455_15780 771 16.06 Mlig455_019809

Neo: -

Age: -

Region-enriched R7: 1.973/0.04443
Region-enriched R2: 1.891/0.04593

 0.96 - 0.960 - - - - Mlig455_019809 {REF} {Length: 883} {RNA1509_45384} {RNA1310_49242.1} {RNA815_27288}
14. MligTC455_46120 185 3.86 Mlig455_042356

Neo: -

Age: -

 0.96 - - 0.960 - - - Mlig455_042356 {REF} {Length: 1296} {RNA1509_23490} {RNA1310_21881} {RNA815_8961}
15. MligTC455_34316 68 1.42 Mlig455_062660

Neo: -

Age: -

 0.959 - - 0.959 - - - Mlig455_062660 {REF} {Length: 1710} {TRANSSPLICED} {RNA1509_48329} {RNA1310_18117} {RNA815_28436}
16. MligTC455_46768 270 5.62 Mlig455_058364

Neo: -

Age: -

 WDR49 0.958 - - 0.958 - - - Mlig455_058364 {REF} {Length: 4549} {Pfam: WD domain, G-beta repeat [PF00400.34, score=83.4]; EF-hand domain pair [PF13833.8, score=23.4]} {Human: ENSG00000174776, WDR49, WD repeat domain 49, [Score=695, Expect=0.0]} {Mouse: ENSMUSG00000104301, Wdr49, WD repeat domain 49, [Score=424, Expect=3e-134]} {Dmel: FBgn0023527, CG3071, [Score=57.8, Expect=4e-08]} {Smed: dd_Smed_v6_13248_0_8, dd_Smed_v6_13248_0_8, [Score=880, Expect=0.0]} {RNA1509_4168} {RNA1310_1044.1} {RNA815_1801}
17. MligTC455_39337 938 19.53 Mlig455_039998

Neo: -

Age: logFC(26M/2M)=-0.274

 NR1I2 0.957 - - 0.957 - - - Mlig455_039998 {REF} {Length: 6281} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=65.3]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=80.5, Expect=2e-15]; ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=79.0, Expect=2e-15]; ENSG00000196482, ESRRG, estrogen related receptor gamma, [Score=77.0, Expect=2e-14]; ENSG00000173153, ESRRA, estrogen related receptor alpha, [Score=77.0, Expect=2e-14]} {Mouse: ENSMUSG00000005677, Nr1i3, nuclear receptor subfamily 1, group I, member 3, [Score=82.4, Expect=1e-16]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=85.1, Expect=5e-17]} {Celegans: WBGene00003607, nhr-8, Nuclear hormone receptor family member nhr-8, [Score=89.4, Expect=1e-18]} {Smed: dd_Smed_v6_14067_0_2, dd_Smed_v6_14067_0_2, [RH, Score=94.0, Expect=5e-20]} {RNA1509_24367, RNA1509_36420, RNA1509_3835, RNA1509_43631, RNA1509_45925, RNA1509_55162, RNA1509_59667} {RNA1310_4758.2, RNA1509_24367, RNA1509_36420, RNA1509_3835, RNA1509_43631, RNA1509_45925, RNA1509_55162, RNA1509_59667} {RNA1509_24367, RNA1509_36420, RNA1509_3835, RNA1509_43631, RNA1509_45925, RNA1509_55162, RNA1509_59667, RNA815_2117}
18. MligTC455_14715 31 0.65 Mlig455_043609

Neo: -

Age: -

 ANGPTL1 0.956 - 0.956 - - - - Mlig455_043609 {REF} {Length: 1252} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=154.2]} {Human: ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=131, Expect=2e-34]; ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=128, Expect=2e-33]; ENSG00000085265, FCN1, ficolin 1, [Score=128, Expect=2e-34]; ENSG00000160339, FCN2, ficolin 2, [Score=125, Expect=5e-34]} {Mouse: ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=134, Expect=1e-35]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=129, Expect=7e-34]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=128, Expect=2e-33]} {Dmel: FBgn0033312, CG8642, [RH, Score=122, Expect=1e-31]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=112, Expect=7e-28]} {RNA1509_26827} {RNA1310_31596.2} {RNA815_17173.3}
19. MligTC455_14716 29 0.61 Mlig455_043633

Neo: -

Age: -

 ANGPTL2 0.956 - 0.956 - - - - Mlig455_043633 {REF} {Length: 1106} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=157.6]} {Human: ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=134, Expect=2e-35]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=133, Expect=4e-35]; ENSG00000085265, FCN1, ficolin 1, [Score=132, Expect=8e-36]; ENSG00000160339, FCN2, ficolin 2, [Score=128, Expect=4e-35]} {Mouse: ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=137, Expect=1e-36]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=134, Expect=1e-35]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=131, Expect=1e-34]} {Dmel: FBgn0034160, CG5550, [Score=119, Expect=6e-32]} {Celegans: WBGene00017013, ensh-1, [Score=57.8, Expect=2e-09]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=114, Expect=1e-28]} {RNA1509_26827} {RNA1310_31596.2} {RNA815_17173.3}
20. MligTC455_17178 54 1.12 Mlig455_067758

Neo: -

Age: -

Region-enriched R2: 7.471/0.00007

 0.956 - 0.956 - - - - Mlig455_067758 {REF} {Length: 2301} {RNA1509_44702} {RNA1310_14743} {RNA815_20669.1}
21. MligTC455_39860 56 1.17 Mlig455_046932

Neo: -

Age: -

 0.956 - - 0.956 - - - Mlig455_046932 {REF} {Length: 920} {RNA1310_30968} {RNA815_45889}
22. MligTC455_44098 944 19.67 Mlig455_012843

Neo: -

Age: Down-Down-Up

 GCH1 0.956 - - - 0.956 - - Mlig455_012843 {REF} {Length: 1400} {Pfam: GTP cyclohydrolase I [PF01227.24, score=246.6]; QueF-like protein [PF14489.8, score=18.8]} {Human: ENSG00000131979, GCH1, GTP cyclohydrolase 1, [RH, Score=307, Expect=2e-106]} {Mouse: ENSMUSG00000037580, Gch1, GTP cyclohydrolase 1, [RH, Score=302, Expect=2e-104]} {Dmel: FBgn0003162, Pu, Punch, [RH, Score=291, Expect=5e-100]} {Celegans: WBGene00000298, cat-4, GTP cyclohydrolase 1, [RH, Score=300, Expect=5e-104]} {Smed: dd_Smed_v6_11172_0_1, dd_Smed_v6_11172_0_1, [RH, Score=296, Expect=8e-103]} {RNA1509_50079} {RNA1310_26106.1} {RNA815_21206}
23. MligTC455_27796 664 13.84 Mlig455_005664

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.450

 HELZ2 0.955 0.955 - - - - - Mlig455_005664 {REF} {Length: 8120} {Pfam: RNB domain [PF00773.21, score=158.5]; AAA domain [PF13086.8, score=134.0]; AAA domain [PF13087.8, score=128.8]; AAA domain [PF13604.8, score=26.8]; Viral (Superfamily 1) RNA helicase [PF01443.20, score=21.9]; UvrD-like helicase C-terminal domain [PF13361.8, score=19.7]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.6]} {Human: ENSG00000130589, HELZ2, helicase with zinc finger 2, [Score=148, Expect=6e-35]} {Mouse: ENSMUSG00000027580, Helz2, helicase with zinc finger 2, transcriptional coactivator, [Score=146, Expect=3e-34]} {Dmel: FBgn0039183, Dis3, [Score=110, Expect=8e-24]} {Celegans: WBGene00018612, disl-2, DIS3-like exonuclease 2, [Score=103, Expect=8e-22]} {Smed: dd_Smed_v6_8176_0_1, dd_Smed_v6_8176_0_1, [RH, Score=326, Expect=7e-90]} {RNA1509_18632} {RNA1310_275} {RNA815_982.1}
24. MligTC455_35173 530 11.04 Mlig455_036056

Neo: -

Age: Up-Down-Up

 PTPRN2 0.953 - - 0.953 - - - Mlig455_036056 {REF} {Length: 3538} {TRANSSPLICED} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=223.4]} {Human: ENSG00000155093, PTPRN2, protein tyrosine phosphatase, receptor type N2, [RH, Score=412, Expect=1e-130]; ENSG00000054356, PTPRN, protein tyrosine phosphatase, receptor type N, [RH, Score=395, Expect=3e-125]} {Mouse: ENSMUSG00000056553, Ptprn2, protein tyrosine phosphatase, receptor type, N polypeptide 2, [RH, Score=406, Expect=1e-128]} {Dmel: FBgn0031294, IA-2, IA-2 protein tyrosine phosphatase, [RH, Score=377, Expect=2e-115]} {Celegans: WBGene00002048, ida-1, IA2; IDA-1 protein; Related to Islet cell Diabetes Autoantigen, [Score=280, Expect=2e-83]} {Smed: dd_Smed_v6_6990_0_1, dd_Smed_v6_6990_0_1, [RH, Score=392, Expect=2e-126]} {RNA1509_41198} {RNA1310_18648} {RNA815_1727.1}
25. MligTC455_50627 260 5.41 Mlig455_016566, Mlig455_016617

Neo: -

Age: -

Region-enriched R2: 2.464/0.02538

 0.953 - 0.953 - - - -

Mlig455_016566 {REF} {Length: 1108} {Pfam: Universal stress protein family [PF00582.28, score=89.8]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=110, Expect=1e-30]} {RNA1310_31742} {RNA815_15537}

Mlig455_016617 {REF} {Length: 1220} {Pfam: Universal stress protein family [PF00582.28, score=89.9]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=110, Expect=1e-30]} {RNA1310_31742} {RNA815_15537}
26. MligTC455_24345 161 3.36 Mlig455_001456

Neo: -

Age: -

 0.951 - - 0.951 - - - Mlig455_001456 {REF} {Length: 3298} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=18.3]} {RNA1310_23364} {RNA815_42991}
27. MligTC455_46584 107 2.22 Mlig455_010128

Neo: -

Age: Up-Down-Down

 KCNC2 0.951 - - 0.951 - - - Mlig455_010128 {REF} {Length: 1706} {Human: ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=74.3, Expect=3e-15]} {Mouse: ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [Score=74.3, Expect=3e-16]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=114, Expect=3e-29]} {Celegans: WBGene00001202, egl-36, Potassium voltage-gated channel protein egl-36, [Score=100, Expect=1e-24]} {Smed: dd_Smed_v6_17998_0_1, dd_Smed_v6_17998_0_1, [Score=118, Expect=1e-32]} {RNA1310_24374} {RNA815_11270}
28. MligTC455_53628 724 15.09 Mlig455_060297

Neo: -

Age: Down-Up-Up

 ADGRA3 0.95 - - 0.950 - - - Mlig455_060297 {REF} {Length: 2032} {Pfam: Leucine rich repeat [PF13855.8, score=61.4]} {Human: ENSG00000152990, ADGRA3, adhesion G protein-coupled receptor A3, [Score=49.3, Expect=1e-05]; ENSG00000187122, SLIT1, slit guidance ligand 1, [Score=49.3, Expect=1e-05]} {Mouse: ENSMUSG00000025020, Slit1, slit guidance ligand 1, [Score=50.8, Expect=2e-06]; ENSMUSG00000029090, Adgra3, adhesion G protein-coupled receptor A3, [Score=48.9, Expect=1e-05]; ENSMUSG00000044505, Lingo4, leucine rich repeat and Ig domain containing 4, [Score=48.5, Expect=1e-05]} {Dmel: FBgn0264089, sli, slit, [Score=53.5, Expect=2e-07]} {RNA1509_49012} {RNA1310_15910.1} {RNA815_6013}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA