M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_21056

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_21056 239 4.98 Mlig455_009853

Neo: -

Age: -

Region-enriched R5: 1.742/0.03946

 KDELR2 Mlig455_009853 {REF} {Length: 1927} {TRANSSPLICED} {Pfam: ER lumen protein retaining receptor [PF00810.20, score=47.0]} {Human: ENSG00000136240, KDELR2, KDEL endoplasmic reticulum protein retention receptor 2, [Score=67.0, Expect=8e-13]; ENSG00000105438, KDELR1, KDEL endoplasmic reticulum protein retention receptor 1, [Score=67.0, Expect=8e-13]; ENSG00000100196, KDELR3, KDEL endoplasmic reticulum protein retention receptor 3, [Score=64.7, Expect=6e-12]} {Mouse: ENSMUSG00000079111, Kdelr2, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2, [Score=69.3, Expect=9e-14]; ENSMUSG00000002778, Kdelr1, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1, [Score=68.9, Expect=1e-13]; ENSMUSG00000010830, Kdelr3, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3, [Score=68.9, Expect=1e-13]} {Dmel: FBgn0267330, KdelR, KDEL receptor, [Score=55.1, Expect=8e-09]} {Celegans: WBGene00016195, C28H8.4, Putative ER lumen protein-retaining receptor C28H8.4, [Score=56.6, Expect=1e-09]} {Smed: dd_Smed_v6_3954_0_1, dd_Smed_v6_3954_0_1, [Score=61.6, Expect=2e-11]} {RNA1509_44783} {RNA1310_34163} {RNA815_17180}

Cumulative graph for MligTC455_21056

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.764 2.878 0.07273 0.59902
RegionR2 1.436 2.878 0.12005 0.42914
RegionR3 1.173 2.878 0.13904 0.63700
RegionR4 0.495 2.878 0.60043 0.91351
RegionR5 1.742 2.878 0.00593 0.03946
RegionR6 1.792 2.878 0.01167 0.18483
RegionR7 0.433 2.878 0.66376 1.00000
RegionR8 -0.307 2.878 0.93045 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.57 2.878 0.99988 1.00000
RegenerationR2 -0.22 2.878 0.66220 0.94241
RegenerationR3 -0.782 2.878 0.19548 0.63076
RegenerationR4 0.088 2.878 0.89304 1.00000
RegenerationR5 -0.207 2.878 0.67487 0.94298
RegenerationR6 -1.294 2.878 0.03644 0.23862
RegenerationBL -0.236 2.878 0.78568 1.00000
RegenerationTP 1.303 2.878 0.10811 0.50753


Genes with expression patterns similar to MligTC455_21056

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_21056 239 4.98 Mlig455_009853

Neo: -

Age: -

Region-enriched R5: 1.742/0.03946

 KDELR2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_009853 {REF} {Length: 1927} {TRANSSPLICED} {Pfam: ER lumen protein retaining receptor [PF00810.20, score=47.0]} {Human: ENSG00000136240, KDELR2, KDEL endoplasmic reticulum protein retention receptor 2, [Score=67.0, Expect=8e-13]; ENSG00000105438, KDELR1, KDEL endoplasmic reticulum protein retention receptor 1, [Score=67.0, Expect=8e-13]; ENSG00000100196, KDELR3, KDEL endoplasmic reticulum protein retention receptor 3, [Score=64.7, Expect=6e-12]} {Mouse: ENSMUSG00000079111, Kdelr2, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2, [Score=69.3, Expect=9e-14]; ENSMUSG00000002778, Kdelr1, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1, [Score=68.9, Expect=1e-13]; ENSMUSG00000010830, Kdelr3, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3, [Score=68.9, Expect=1e-13]} {Dmel: FBgn0267330, KdelR, KDEL receptor, [Score=55.1, Expect=8e-09]} {Celegans: WBGene00016195, C28H8.4, Putative ER lumen protein-retaining receptor C28H8.4, [Score=56.6, Expect=1e-09]} {Smed: dd_Smed_v6_3954_0_1, dd_Smed_v6_3954_0_1, [Score=61.6, Expect=2e-11]} {RNA1509_44783} {RNA1310_34163} {RNA815_17180}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA