Data search
Results for MligTC455_21070
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_21070 | 329 | 6.85 | Mlig455_002846 | Neo: Irradiation Age: - |
LSG1 | Mlig455_002846 {REF} {Length: 2227} {Pfam: 50S ribosome-binding GTPase [PF01926.25, score=47.9]; RsgA GTPase [PF03193.18, score=22.2]} {Human: ENSG00000041802, LSG1, large 60S subunit nuclear export GTPase 1, [Score=152, Expect=9e-40]} {Mouse: ENSMUSG00000022538, Lsg1, large 60S subunit nuclear export GTPase 1, [Score=154, Expect=2e-40]} {Dmel: FBgn0266284, Ns3, Nucleostemin 3, [RH, Score=278, Expect=5e-87]} {Celegans: WBGene00016907, C53H9.2, [RH, Score=254, Expect=4e-80]} {Smed: dd_Smed_v6_7698_0_1, dd_Smed_v6_7698_0_1, [Score=137, Expect=8e-35]} {RNA1509_11368} {RNA1310_10776.1} {RNA815_4120} |
Cumulative graph for MligTC455_21070
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.6 | 3.277 | 0.95209 | 1.00000 | |
| RegionR2 | 1.2 | 3.277 | 0.22247 | 0.59226 | |
| RegionR3 | 1.128 | 3.277 | 0.20004 | 0.73988 | |
| RegionR4 | 0.899 | 3.277 | 0.30903 | 0.62331 | |
| RegionR5 | 1.821 | 3.277 | 0.01754 | 0.08795 | |
| RegionR6 | 1.461 | 3.277 | 0.09184 | 0.55689 | |
| RegionR7 | 0.266 | 3.277 | 0.69663 | 1.00000 | |
| RegionR8 | -6.175 | 3.277 | 0.02332 | 0.29820 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.664 | 3.277 | 0.28909 | 0.98735 | |
| RegenerationR2 | 0.572 | 3.277 | 0.41381 | 0.82296 | |
| RegenerationR3 | 1.364 | 3.277 | 0.07172 | 0.44805 | |
| RegenerationR4 | 1.551 | 3.277 | 0.05678 | 0.38217 | |
| RegenerationR5 | 0.805 | 3.277 | 0.23875 | 0.67252 | |
| RegenerationR6 | 1.028 | 3.277 | 0.17762 | 0.51139 | |
| RegenerationBL | 2.206 | 3.277 | 0.11746 | 0.40571 | |
| RegenerationTP | 4.421 | 3.277 | 0.00392 | 0.10462 |
Genes with expression patterns similar to MligTC455_21070
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_21070 | 329 | 6.85 | Mlig455_002846 | Neo: Irradiation Age: - |
LSG1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_002846 {REF} {Length: 2227} {Pfam: 50S ribosome-binding GTPase [PF01926.25, score=47.9]; RsgA GTPase [PF03193.18, score=22.2]} {Human: ENSG00000041802, LSG1, large 60S subunit nuclear export GTPase 1, [Score=152, Expect=9e-40]} {Mouse: ENSMUSG00000022538, Lsg1, large 60S subunit nuclear export GTPase 1, [Score=154, Expect=2e-40]} {Dmel: FBgn0266284, Ns3, Nucleostemin 3, [RH, Score=278, Expect=5e-87]} {Celegans: WBGene00016907, C53H9.2, [RH, Score=254, Expect=4e-80]} {Smed: dd_Smed_v6_7698_0_1, dd_Smed_v6_7698_0_1, [Score=137, Expect=8e-35]} {RNA1509_11368} {RNA1310_10776.1} {RNA815_4120} |
| 2. | MligTC455_44433 | 5002 | 104.21 | Mlig455_020702, Mlig455_020770 | Neo: Int S/G2/M |
GATC | 1.695 | - | - | - | 0.969 | - | 0.726 | Mlig455_020702 {REF} {Length: 695} {TRANSSPLICED} {Pfam: Glu-tRNAGln amidotransferase C subunit [PF02686.17, score=28.6]} {Human: ENSG00000257218, GATC, glutamyl-tRNA amidotransferase subunit C, [RH, Score=57.0, Expect=3e-10]; ENSG00000111780, AL021546.1, novel protein, [RH, Score=56.6, Expect=8e-10]} {Mouse: ENSMUSG00000029536, Gatc, glutamyl-tRNA(Gln) amidotransferase, subunit C, [RH, Score=56.6, Expect=4e-10]} {Dmel: FBgn0064115, GatC, Glutamyl-tRNA amidotransferase, subunit C, [RH, Score=67.0, Expect=3e-14]} {Celegans: WBGene00013433, Y66D12A.7, Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial, [RH, Score=65.5, Expect=2e-13]} {Smed: dd_Smed_v6_5215_0_1, dd_Smed_v6_5215_0_1, [RH, Score=63.5, Expect=5e-13]} {RNA1509_12082} {RNA1310_51637} {RNA815_26749} Mlig455_020770 {REF} {Length: 698} {TRANSSPLICED} {Pfam: Glu-tRNAGln amidotransferase C subunit [PF02686.17, score=28.6]} {Human: ENSG00000257218, GATC, glutamyl-tRNA amidotransferase subunit C, [RH, Score=57.0, Expect=3e-10]; ENSG00000111780, AL021546.1, novel protein, [RH, Score=56.6, Expect=7e-10]} {Mouse: ENSMUSG00000029536, Gatc, glutamyl-tRNA(Gln) amidotransferase, subunit C, [RH, Score=56.6, Expect=4e-10]} {Dmel: FBgn0064115, GatC, Glutamyl-tRNA amidotransferase, subunit C, [RH, Score=67.0, Expect=4e-14]} {Celegans: WBGene00013433, Y66D12A.7, Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial, [RH, Score=65.5, Expect=2e-13]} {Smed: dd_Smed_v6_5215_0_1, dd_Smed_v6_5215_0_1, [RH, Score=63.5, Expect=5e-13]} {RNA1509_12082, RNA1509_4336} {RNA1310_51637, RNA1509_4336} {RNA1509_4336, RNA815_26749} |
| 3. | MligTC455_43152 | 2228 | 46.41 | Mlig455_024394 | Neo: Int S/G2/M Age: - |
NSA2 | 1.686 | 0.733 | - | - | 0.953 | - | - | Mlig455_024394 {REF} {Length: 1059} {TRANSSPLICED} {Pfam: Ribosomal protein S8e [PF01201.24, score=143.3]} {Human: ENSG00000164346, NSA2, NSA2, ribosome biogenesis homolog, [RH, Score=411, Expect=2e-146]} {Mouse: ENSMUSG00000060739, Nsa2, NSA2 ribosome biogenesis homolog, [RH, Score=411, Expect=1e-146]} {Dmel: FBgn0025366, Ip259, Intronic Protein 259, [RH, Score=376, Expect=5e-133]} {Celegans: WBGene00012351, W09C5.1, [RH, Score=382, Expect=2e-135]} {Smed: dd_Smed_v6_1012_0_1, dd_Smed_v6_1012_0_1, [RH, Score=333, Expect=3e-116]} {RNA1509_1231, RNA1509_56576} {RNA1310_32113, RNA1509_56576} {RNA1509_56576, RNA815_15102} |
| 4. | MligTC455_20351 | 1824 | 38 | Mlig455_019951, Mlig455_020022 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.144/0.00068 |
DDX17 | 0.967 | - | - | - | - | 0.967 | - | Mlig455_019951 {REF} {Length: 2463} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=162.7]; Helicase conserved C-terminal domain [PF00271.33, score=107.8]; Type III restriction enzyme, res subunit [PF04851.17, score=20.2]} {Human: ENSG00000100201, DDX17, DEAD-box helicase 17, [RH, Score=523, Expect=3e-179]; ENSG00000108654, DDX5, DEAD-box helicase 5, [RH, Score=517, Expect=2e-178]} {Mouse: ENSMUSG00000055065, Ddx17, DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, [RH, Score=523, Expect=1e-180]; ENSMUSG00000020719, Ddx5, DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, [RH, Score=515, Expect=5e-178]} {Dmel: FBgn0035720, CG10077, [RH, Score=504, Expect=3e-171]} {Celegans: WBGene00010260, ddx-17, DEAD boX helicase homolog, [RH, Score=462, Expect=3e-158]} {Smed: dd_Smed_v6_3743_0_2, dd_Smed_v6_3743_0_2, [RH, Score=525, Expect=0.0]} {RNA1509_4339, RNA1509_46098} {RNA1310_12456.1, RNA1509_46098} {RNA1509_46098, RNA815_4698} Mlig455_020022 {REF} {Length: 2509} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=163.3]; Helicase conserved C-terminal domain [PF00271.33, score=108.3]; Type III restriction enzyme, res subunit [PF04851.17, score=19.0]} {Human: ENSG00000100201, DDX17, DEAD-box helicase 17, [RH, Score=522, Expect=5e-179]; ENSG00000108654, DDX5, DEAD-box helicase 5, [RH, Score=517, Expect=1e-178]} {Mouse: ENSMUSG00000055065, Ddx17, DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, [RH, Score=523, Expect=2e-180]; ENSMUSG00000020719, Ddx5, DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, [RH, Score=516, Expect=2e-178]} {Dmel: FBgn0035720, CG10077, [RH, Score=503, Expect=8e-171]} {Celegans: WBGene00010260, ddx-17, DEAD boX helicase homolog, [RH, Score=464, Expect=4e-159]} {Smed: dd_Smed_v6_3743_0_2, dd_Smed_v6_3743_0_2, [RH, Score=527, Expect=0.0]} {RNA1509_4339} {RNA1310_12456.1} {RNA815_4698} |
| 5. | MligTC455_46919 | 763 | 15.9 | Mlig455_045668 | Neo: - Age: Down-Up-Up |
PCTP | 0.959 | - | - | - | - | - | 0.959 | Mlig455_045668 {REF} {Length: 1324} {TRANSSPLICED} {Pfam: START domain [PF01852.21, score=79.4]} {Human: ENSG00000141179, PCTP, phosphatidylcholine transfer protein, [RH, Score=173, Expect=5e-54]} {Mouse: ENSMUSG00000020553, Pctp, phosphatidylcholine transfer protein, [RH, Score=187, Expect=1e-59]} {Dmel: FBgn0032513, CG6565, [Score=81.6, Expect=8e-18]} {Smed: dd_Smed_v6_3734_0_1, dd_Smed_v6_3734_0_1, [Score=73.2, Expect=2e-15]} {RNA1509_31215} {RNA1310_20753.2} {RNA815_11008} |
| 6. | MligTC455_44010 | 11925 | 248.44 | Mlig455_045809, Mlig455_063173 | Neo: Int S/G2/M |
PES1 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_045809 {REF} {Length: 1868} {TRANSSPLICED} {Pfam: Pescadillo N-terminus [PF06732.13, score=351.5]} {Human: ENSG00000100029, PES1, pescadillo ribosomal biogenesis factor 1, [Score=353, Expect=1e-116]} {Mouse: ENSMUSG00000020430, Pes1, pescadillo ribosomal biogenesis factor 1, [Score=348, Expect=9e-115]} {Dmel: FBgn0032138, CG4364, [Score=332, Expect=6e-108]} {Celegans: WBGene00003063, lpd-7, Pescadillo homolog, [Score=310, Expect=1e-100]} {Smed: dd_Smed_v6_900_0_1, dd_Smed_v6_900_0_1, [Score=246, Expect=4e-76]} {RNA1509_1246} {RNA1310_14503} {RNA815_5777} Mlig455_063173 {REF} {Length: 1867} {TRANSSPLICED} {Pfam: Pescadillo N-terminus [PF06732.13, score=350.1]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=43.9]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=28.0]} {Human: ENSG00000100029, PES1, pescadillo ribosomal biogenesis factor 1, [RH, Score=450, Expect=3e-152]} {Mouse: ENSMUSG00000020430, Pes1, pescadillo ribosomal biogenesis factor 1, [RH, Score=448, Expect=1e-151]} {Dmel: FBgn0032138, CG4364, [RH, Score=407, Expect=2e-135]} {Celegans: WBGene00003063, lpd-7, Pescadillo homolog, [RH, Score=377, Expect=4e-125]} {Smed: dd_Smed_v6_900_0_1, dd_Smed_v6_900_0_1, [RH, Score=315, Expect=1e-100]} {RNA1509_10018, RNA1509_10346, RNA1509_1246} {RNA1310_14503, RNA1509_10018, RNA1509_10346, RNA1509_1246} {RNA1509_10018, RNA1509_10346, RNA1509_1246, RNA815_5777} |
| 7. | MligTC455_44243 | 2158 | 44.95 | Mlig455_056080 | Neo: - |
ECH1 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_056080 {REF} {Length: 1125} {TRANSSPLICED} {Pfam: Enoyl-CoA hydratase/isomerase [PF00378.22, score=140.2]; Enoyl-CoA hydratase/isomerase [PF16113.7, score=91.4]} {Human: ENSG00000282853, ECH1, enoyl-CoA hydratase 1, [RH, Score=271, Expect=1e-89]; ENSG00000104823, ECH1, enoyl-CoA hydratase 1, [RH, Score=271, Expect=1e-89]} {Mouse: ENSMUSG00000053898, Ech1, enoyl coenzyme A hydratase 1, peroxisomal, [RH, Score=286, Expect=1e-95]} {Dmel: FBgn0031092, CG9577, [RH, Score=280, Expect=2e-93]} {Celegans: WBGene00019022, F58A6.1, [RH, Score=243, Expect=9e-80]} {Smed: dd_Smed_v6_2181_0_1, dd_Smed_v6_2181_0_1, [RH, Score=274, Expect=1e-91]} {RNA1509_42173, RNA1509_56167} {RNA1310_10485, RNA1509_42173, RNA1509_56167} {RNA1509_42173, RNA1509_56167, RNA815_14750} |
| 8. | MligTC455_24723 | 763 | 15.9 | Mlig455_017678 | Neo: - Age: logFC(26M/2M)=1.030 |
APEH | 0.95 | - | - | - | - | - | 0.950 | Mlig455_017678 {REF} {Length: 2719} {TRANSSPLICED} {Pfam: Prolyl oligopeptidase family [PF00326.23, score=101.8]; Acylamino-acid-releasing enzyme, N-terminal domain [PF19283.1, score=66.9]; Serine aminopeptidase, S33 [PF12146.10, score=35.4]; alpha/beta hydrolase fold [PF00561.22, score=25.9]; X-Pro dipeptidyl-peptidase (S15 family) [PF02129.20, score=18.9]} {Human: ENSG00000164062, APEH, acylaminoacyl-peptide hydrolase, [RH, Score=461, Expect=2e-151]} {Mouse: ENSMUSG00000032590, Apeh, acylpeptide hydrolase, [RH, Score=471, Expect=1e-155]} {Celegans: WBGene00001058, dpf-5, Dipeptidyl Peptidase Four (IV) family, [RH, Score=337, Expect=1e-104]} {Smed: dd_Smed_v6_8116_0_1, dd_Smed_v6_8116_0_1, [RH, Score=476, Expect=5e-158]} {RNA1509_5695} {RNA1310_6241} {RNA815_2430} |