Data search


search
Exact
Search

Results for MligTC455_21094

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_21094 2274 47.38 Mlig455_014960

Neo: -

Age: -

Region-enriched R4: 1.144/0.01618

Mlig455_014960 {REF} {Length: 1195} {TRANSSPLICED} {Pfam: Hydrolethalus syndrome protein 1 C-terminus [PF15311.8, score=36.9]} {Smed: dd_Smed_v6_13289_0_1, dd_Smed_v6_13289_0_1, [RH, Score=84.0, Expect=4e-19]} {RNA1509_2304} {RNA1310_28845} {RNA815_27698}

Cumulative graph for MligTC455_21094

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.158 5.749 0.79610 1.00000
RegionR2 -0.311 5.749 0.42888 0.81905
RegionR3 -0.716 5.749 0.04120 0.35410
RegionR4 1.144 5.749 0.00175 0.01618
RegionR5 0.975 5.749 0.00097 0.00989
RegionR6 -0.051 5.749 0.87707 1.00000
RegionR7 -0.392 5.749 0.29350 0.92806
RegionR8 -0.807 5.749 0.07465 0.52117

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.521 5.749 0.09850 0.81498
RegenerationR2 -0.477 5.749 0.23774 0.68591
RegenerationR3 0.249 5.749 0.55927 0.88825
RegenerationR4 -1.062 5.749 0.01243 0.17175
RegenerationR5 -0.813 5.749 0.03990 0.32931
RegenerationR6 -0.201 5.749 0.62856 0.88581
RegenerationBL 0.2 5.749 0.62506 0.96746
RegenerationTP -0.499 5.749 0.28947 0.73489


Genes with expression patterns similar to MligTC455_21094

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_21094 2274 47.38 Mlig455_014960

Neo: -

Age: -

Region-enriched R4: 1.144/0.01618

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_014960 {REF} {Length: 1195} {TRANSSPLICED} {Pfam: Hydrolethalus syndrome protein 1 C-terminus [PF15311.8, score=36.9]} {Smed: dd_Smed_v6_13289_0_1, dd_Smed_v6_13289_0_1, [RH, Score=84.0, Expect=4e-19]} {RNA1509_2304} {RNA1310_28845} {RNA815_27698}
2. MligTC455_21095 2187 45.56 Mlig455_045173

Neo: -

Age: -

Region-enriched R4: 1.126/0.01219
Region-enriched R5: 1.067/0.00188

5.879 0.992 0.985 0.990 0.985 0.959 0.968 Mlig455_045173 {REF} {Length: 1194} {TRANSSPLICED} {Pfam: Hydrolethalus syndrome protein 1 C-terminus [PF15311.8, score=36.9]} {Smed: dd_Smed_v6_13289_0_1, dd_Smed_v6_13289_0_1, [RH, Score=84.0, Expect=5e-19]} {RNA1509_20356, RNA1509_2304} {RNA1310_28845, RNA1509_20356, RNA1509_2304} {RNA1509_20356, RNA1509_2304, RNA815_27698}
3. MligTC455_51464 987 20.56 Mlig455_030446

Neo: Int S/G2/M

Age: Down-Up-Up

Region-enriched R5: 1.161/0.00531

MRPL28 0.951 - - - - 0.951 - Mlig455_030446 {REF} {Length: 991} {TRANSSPLICED} {Human: ENSG00000086504, MRPL28, mitochondrial ribosomal protein L28, [RH, Score=115, Expect=8e-31]} {Mouse: ENSMUSG00000024181, Mrpl28, mitochondrial ribosomal protein L28, [RH, Score=111, Expect=3e-29]} {Celegans: WBGene00020796, mrpl-28, Mitochondrial Ribosomal Protein, Large, [RH, Score=110, Expect=9e-29]} {Smed: dd_Smed_v6_6299_0_1, dd_Smed_v6_6299_0_1, [RH, Score=161, Expect=4e-49]} {RNA1509_12557, RNA1509_28391} {RNA1310_26808, RNA1509_12557, RNA1509_28391} {RNA1509_12557, RNA1509_28391, RNA815_16476}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA