Data search
Results for MligTC455_21169
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_21169 | 2460 | 51.25 | Mlig455_043177 | Neo: - Age: logFC(26M/2M)=0.216 |
RDX | Mlig455_043177 {REF} {Length: 3183} {TRANSSPLICED} {Pfam: Ezrin/radixin/moesin family [PF00769.21, score=109.7]; FERM C-terminal PH-like domain [PF09380.12, score=87.7]; FERM central domain [PF00373.20, score=85.7]; FERM N-terminal domain [PF09379.12, score=67.8]} {Human: ENSG00000137710, RDX, radixin, [RH, Score=600, Expect=0.0]; ENSG00000092820, EZR, ezrin, [RH, Score=592, Expect=0.0]; ENSG00000147065, MSN, moesin, [RH, Score=583, Expect=0.0]} {Mouse: ENSMUSG00000032050, Rdx, radixin, [RH, Score=600, Expect=0.0]; ENSMUSG00000052397, Ezr, ezrin, [RH, Score=584, Expect=0.0]; ENSMUSG00000031207, Msn, moesin, [RH, Score=578, Expect=0.0]} {Dmel: FBgn0011661, Moe, Moesin, [RH, Score=583, Expect=0.0]} {Celegans: WBGene00001333, erm-1, ERM-1B; Ezrin/Radixin/Moesin, [RH, Score=588, Expect=0.0]} {Smed: dd_Smed_v6_8101_0_1, dd_Smed_v6_8101_0_1, [RH, Score=518, Expect=2e-179]} {RNA1509_895} {RNA1310_6034.1} {RNA815_1582.1} |
Cumulative graph for MligTC455_21169
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.633 | 5.884 | 0.01950 | 0.38746 | |
| RegionR2 | -0.332 | 5.884 | 0.29830 | 0.68705 | |
| RegionR3 | -0.239 | 5.884 | 0.38057 | 0.91230 | |
| RegionR4 | 0.377 | 5.884 | 0.22070 | 0.50976 | |
| RegionR5 | 0.741 | 5.884 | 0.00216 | 0.01851 | |
| RegionR6 | 0.789 | 5.884 | 0.00190 | 0.05877 | |
| RegionR7 | 0.482 | 5.884 | 0.10568 | 0.61783 | |
| RegionR8 | -0.185 | 5.884 | 0.62572 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.474 | 5.884 | 0.67502 | 1.00000 | |
| RegenerationR2 | 0.559 | 5.884 | 0.05318 | 0.38002 | |
| RegenerationR3 | 0.268 | 5.884 | 0.39033 | 0.79632 | |
| RegenerationR4 | 0.238 | 5.884 | 0.44497 | 0.83933 | |
| RegenerationR5 | -0.38 | 5.884 | 0.19234 | 0.62347 | |
| RegenerationR6 | -0.257 | 5.884 | 0.38442 | 0.72471 | |
| RegenerationBL | -0.54 | 5.884 | 0.09144 | 0.35471 | |
| RegenerationTP | -0.105 | 5.884 | 0.76028 | 1.00000 |
Genes with expression patterns similar to MligTC455_21169
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_21169 | 2460 | 51.25 | Mlig455_043177 | Neo: - Age: logFC(26M/2M)=0.216 |
RDX | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_043177 {REF} {Length: 3183} {TRANSSPLICED} {Pfam: Ezrin/radixin/moesin family [PF00769.21, score=109.7]; FERM C-terminal PH-like domain [PF09380.12, score=87.7]; FERM central domain [PF00373.20, score=85.7]; FERM N-terminal domain [PF09379.12, score=67.8]} {Human: ENSG00000137710, RDX, radixin, [RH, Score=600, Expect=0.0]; ENSG00000092820, EZR, ezrin, [RH, Score=592, Expect=0.0]; ENSG00000147065, MSN, moesin, [RH, Score=583, Expect=0.0]} {Mouse: ENSMUSG00000032050, Rdx, radixin, [RH, Score=600, Expect=0.0]; ENSMUSG00000052397, Ezr, ezrin, [RH, Score=584, Expect=0.0]; ENSMUSG00000031207, Msn, moesin, [RH, Score=578, Expect=0.0]} {Dmel: FBgn0011661, Moe, Moesin, [RH, Score=583, Expect=0.0]} {Celegans: WBGene00001333, erm-1, ERM-1B; Ezrin/Radixin/Moesin, [RH, Score=588, Expect=0.0]} {Smed: dd_Smed_v6_8101_0_1, dd_Smed_v6_8101_0_1, [RH, Score=518, Expect=2e-179]} {RNA1509_895} {RNA1310_6034.1} {RNA815_1582.1} |
| 2. | MligTC455_53919 | 394 | 8.2 | Mlig455_022726 | Neo: - Age: - |
RPGR | 1.754 | - | - | - | - | 0.954 | 0.800 | Mlig455_022726 {REF} {Length: 4679} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=168.1]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=127.2]} {Human: ENSG00000156313, RPGR, retinitis pigmentosa GTPase regulator, [Score=218, Expect=7e-58]} {Mouse: ENSMUSG00000031174, Rpgr, retinitis pigmentosa GTPase regulator, [Score=209, Expect=2e-55]} {Dmel: FBgn0035207, Sherpa, SUMO-related HECT domain and RCC repeat protein for Toll pathway activation, [Score=130, Expect=2e-30]} {Celegans: WBGene00021685, herc-1, HECT and RCC domain E3 ubiquitin ligase, [Score=99.8, Expect=5e-21]} {Smed: dd_Smed_v6_2716_1_1, dd_Smed_v6_2716_1_1, [RH, Score=217, Expect=3e-60]} {RNA1509_21041} {RNA1310_3558.1, RNA1509_21041} {RNA1509_21041, RNA815_17415} |
| 3. | MligTC455_48319 | 788 | 16.41 | Mlig455_007998 | Neo: Int S/G2/M Age: - |
BLOC1S6 | 1.711 | - | - | - | 0.760 | - | 0.951 | Mlig455_007998 {REF} {Length: 1046} {TRANSSPLICED} {Pfam: Snapin/Pallidin [PF14712.8, score=56.3]; Xrn1 helical domain [PF17846.3, score=18.3]} {Human: ENSG00000104164, BLOC1S6, biogenesis of lysosomal organelles complex 1 subunit 6, [Score=67.4, Expect=4e-14]} {Mouse: ENSMUSG00000005804, Bloc1s6, biogenesis of lysosomal organelles complex-1, subunit 6, pallidin, [Score=64.7, Expect=3e-13]} {Dmel: FBgn0036192, Pldn, Pallidin, [Score=48.5, Expect=2e-07]} {RNA1509_18529, RNA1509_33779, RNA1509_36366, RNA1509_42109, RNA1509_48869} {RNA1310_34561, RNA1509_18529, RNA1509_33779, RNA1509_36366, RNA1509_42109, RNA1509_48869} {RNA1509_18529, RNA1509_33779, RNA1509_36366, RNA1509_42109, RNA1509_48869, RNA815_15079.1} |
| 4. | MligTC455_29540 | 309 | 6.43 | Mlig455_066299 | Neo: - Age: Down-Up-Down |
0.965 | - | - | - | - | 0.965 | - | Mlig455_066299 {REF} {Length: 2303} {NoTransDecoderORF} {RNA1509_43025} {RNA1310_39650.1} {RNA815_49791} | |
| 5. | MligTC455_25903 | 200 | 4.17 | Mlig455_069664 | Neo: - Age: - |
0.955 | - | - | - | - | 0.955 | - | Mlig455_069664 {REF} {Length: 6185} {TRANSSPLICED} {RNA1509_3577} {RNA1310_173.2, RNA1509_3577} {RNA1509_3577, RNA815_485.1} | |
| 6. | MligTC455_50590 | 680 | 14.16 | Mlig455_020128 | Neo: - Age: logFC(26M/2M)=-0.232 |
PDP1 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_020128 {REF} {Length: 2927} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=112.4]; Protein phosphatase 2C [PF13672.8, score=20.2]} {Human: ENSG00000164951, PDP1, pyruvate dehyrogenase phosphatase catalytic subunit 1, [RH, Score=227, Expect=1e-67]; ENSG00000172840, PDP2, pyruvate dehyrogenase phosphatase catalytic subunit 2, [RH, Score=222, Expect=6e-66]} {Mouse: ENSMUSG00000049225, Pdp1, pyruvate dehyrogenase phosphatase catalytic subunit 1, [RH, Score=224, Expect=9e-67]; ENSMUSG00000048371, Pdp2, pyruvate dehyrogenase phosphatase catalytic subunit 2, [RH, Score=220, Expect=3e-65]} {Dmel: FBgn0029958, Pdp, Pyruvate dehydrogenase phosphatase, [RH, Score=202, Expect=3e-59]} {Celegans: WBGene00022832, pdp-1, Pyruvate Dehydrogenase Phosphatase homolog, [RH, Score=176, Expect=9e-50]} {Smed: dd_Smed_v6_4201_0_2, dd_Smed_v6_4201_0_2, [RH, Score=263, Expect=9e-83]} {RNA1509_27529, RNA1509_34993, RNA1509_42524, RNA1509_47289, RNA1509_7713} {RNA1310_10528, RNA1509_27529, RNA1509_34993, RNA1509_42524, RNA1509_47289, RNA1509_7713} {RNA1509_27529, RNA1509_34993, RNA1509_42524, RNA1509_47289, RNA1509_7713, RNA815_8293} |
Berezikov Lab - 2020-2021 © ERIBA