TomoSeq data search

Data search

Results for MligTC455_21172

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_21172

3177

66.20

Mlig455_043731, Mlig455_043822, Mlig455_047427

Age: logFC(26M/2M)=0.174

Regeneration-enriched R6: 1.370
Regeneration-enriched BL: 1.255

HNRNPL

Mlig455_043731 {REF} {Length: 3710} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=106.9]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=77.5]; Occluded RNA-recognition motif [PF16842.7, score=32.0]} {Human: ENSG00000282947, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=182, Expect=2e-49]; ENSG00000104824, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=182, Expect=2e-49]} {Mouse: ENSMUSG00000015165, Hnrnpl, heterogeneous nuclear ribonucleoprotein L, [Score=181, Expect=3e-49]} {Dmel: FBgn0003435, sm, smooth, [Score=153, Expect=6e-40]} {Celegans: WBGene00016624, C44B7.2, [Score=108, Expect=1e-24]} {Smed: dd_Smed_v6_1327_0_1, dd_Smed_v6_1327_0_1, [Score=173, Expect=4e-47]} {RNA1509_23350, RNA1509_24952, RNA1509_28186, RNA1509_3426, RNA1509_39309, RNA1509_46237} {RNA1310_32673, RNA1509_23350, RNA1509_24952, RNA1509_28186, RNA1509_3426, RNA1509_39309, RNA1509_46237} {RNA1509_23350, RNA1509_24952, RNA1509_28186, RNA1509_3426, RNA1509_39309, RNA1509_46237, RNA815_14485.1}

Mlig455_043822 {REF} {Length: 3725} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=105.1]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=78.6]; Occluded RNA-recognition motif [PF16842.7, score=31.9]} {Human: ENSG00000104824, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=181, Expect=4e-49]; ENSG00000282947, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=181, Expect=4e-49]} {Mouse: ENSMUSG00000015165, Hnrnpl, heterogeneous nuclear ribonucleoprotein L, [Score=180, Expect=5e-49]} {Dmel: FBgn0003435, sm, smooth, [Score=151, Expect=2e-39]} {Celegans: WBGene00016624, C44B7.2, [Score=108, Expect=1e-24]} {Smed: dd_Smed_v6_1327_0_1, dd_Smed_v6_1327_0_1, [Score=179, Expect=3e-49]} {RNA1509_15346, RNA1509_21380, RNA1509_24952, RNA1509_42272} {RNA1310_32673, RNA1509_15346, RNA1509_21380, RNA1509_42272} {RNA1509_15346, RNA1509_21380, RNA1509_42272, RNA815_14485.1}

Mlig455_047427 {REF} {Length: 3729} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=105.1]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=78.6]; Occluded RNA-recognition motif [PF16842.7, score=31.9]} {Human: ENSG00000104824, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=181, Expect=4e-49]; ENSG00000282947, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=181, Expect=4e-49]} {Mouse: ENSMUSG00000015165, Hnrnpl, heterogeneous nuclear ribonucleoprotein L, [Score=180, Expect=5e-49]} {Dmel: FBgn0003435, sm, smooth, [Score=151, Expect=2e-39]} {Celegans: WBGene00016624, C44B7.2, [Score=108, Expect=1e-24]} {Smed: dd_Smed_v6_1327_0_1, dd_Smed_v6_1327_0_1, [Score=179, Expect=3e-49]} {RNA1509_19642, RNA1509_24952, RNA1509_46312} {RNA1310_32673, RNA1509_19642, RNA1509_46312} {RNA1509_19642, RNA1509_46312, RNA815_14485.1}

Cumulative graph for MligTC455_21172

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.121	6.236	0.08437	0.63190
RegionR2	0.452	6.236	0.18198	0.53297
RegionR3	-0.118	6.236	0.65386	1.00000
RegionR4	-0.438	6.236	0.17374	0.43914
RegionR5	0.537	6.236	0.02202	0.10400
RegionR6	-0.243	6.236	0.37399	0.95464
RegionR7	0.451	6.236	0.11917	0.65251
RegionR8	0.479	6.236	0.16031	0.72443

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.415	6.236	0.70810	1.00000
RegenerationR2	0.262	6.236	0.40042	0.81461
RegenerationR3	0.744	6.236	0.02931	0.30805
RegenerationR4	0.56	6.236	0.10696	0.50426
RegenerationR5	0.368	6.236	0.23120	0.66477
RegenerationR6	1.37	6.236	0.00003	0.00408
RegenerationBL	1.255	6.236	0.00005	0.00248
RegenerationTP	-0.778	6.236	0.04930	0.36428

Genes with expression patterns similar to MligTC455_21172

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_21172	3177	66.2	Mlig455_043731, Mlig455_043822, Mlig455_047427	Neo: Neoblast Age: logFC(26M/2M)=0.174 Regeneration-enriched R6: 1.370 Regeneration-enriched BL: 1.255	HNRNPL	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_043731 {REF} {Length: 3710} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=106.9]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=77.5]; Occluded RNA-recognition motif [PF16842.7, score=32.0]} {Human: ENSG00000282947, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=182, Expect=2e-49]; ENSG00000104824, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=182, Expect=2e-49]} {Mouse: ENSMUSG00000015165, Hnrnpl, heterogeneous nuclear ribonucleoprotein L, [Score=181, Expect=3e-49]} {Dmel: FBgn0003435, sm, smooth, [Score=153, Expect=6e-40]} {Celegans: WBGene00016624, C44B7.2, [Score=108, Expect=1e-24]} {Smed: dd_Smed_v6_1327_0_1, dd_Smed_v6_1327_0_1, [Score=173, Expect=4e-47]} {RNA1509_23350, RNA1509_24952, RNA1509_28186, RNA1509_3426, RNA1509_39309, RNA1509_46237} {RNA1310_32673, RNA1509_23350, RNA1509_24952, RNA1509_28186, RNA1509_3426, RNA1509_39309, RNA1509_46237} {RNA1509_23350, RNA1509_24952, RNA1509_28186, RNA1509_3426, RNA1509_39309, RNA1509_46237, RNA815_14485.1} Mlig455_043822 {REF} {Length: 3725} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=105.1]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=78.6]; Occluded RNA-recognition motif [PF16842.7, score=31.9]} {Human: ENSG00000104824, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=181, Expect=4e-49]; ENSG00000282947, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=181, Expect=4e-49]} {Mouse: ENSMUSG00000015165, Hnrnpl, heterogeneous nuclear ribonucleoprotein L, [Score=180, Expect=5e-49]} {Dmel: FBgn0003435, sm, smooth, [Score=151, Expect=2e-39]} {Celegans: WBGene00016624, C44B7.2, [Score=108, Expect=1e-24]} {Smed: dd_Smed_v6_1327_0_1, dd_Smed_v6_1327_0_1, [Score=179, Expect=3e-49]} {RNA1509_15346, RNA1509_21380, RNA1509_24952, RNA1509_42272} {RNA1310_32673, RNA1509_15346, RNA1509_21380, RNA1509_42272} {RNA1509_15346, RNA1509_21380, RNA1509_42272, RNA815_14485.1} Mlig455_047427 {REF} {Length: 3729} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=105.1]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=78.6]; Occluded RNA-recognition motif [PF16842.7, score=31.9]} {Human: ENSG00000104824, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=181, Expect=4e-49]; ENSG00000282947, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=181, Expect=4e-49]} {Mouse: ENSMUSG00000015165, Hnrnpl, heterogeneous nuclear ribonucleoprotein L, [Score=180, Expect=5e-49]} {Dmel: FBgn0003435, sm, smooth, [Score=151, Expect=2e-39]} {Celegans: WBGene00016624, C44B7.2, [Score=108, Expect=1e-24]} {Smed: dd_Smed_v6_1327_0_1, dd_Smed_v6_1327_0_1, [Score=179, Expect=3e-49]} {RNA1509_19642, RNA1509_24952, RNA1509_46312} {RNA1310_32673, RNA1509_19642, RNA1509_46312} {RNA1509_19642, RNA1509_46312, RNA815_14485.1}
2.	MligTC455_50413	1599	33.31	Mlig455_009964	Neo: Neoblast Age: Down-Down-Up	SUMO3	1.888	-	-	-	0.934	-	0.954	Mlig455_009964 {REF} {Length: 1094} {TRANSSPLICED} {Pfam: Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=76.8]; Ubiquitin family [PF00240.25, score=39.5]} {Human: ENSG00000184900, SUMO3, small ubiquitin-like modifier 3, [RH, Score=113, Expect=9e-34]; ENSG00000188612, SUMO2, small ubiquitin-like modifier 2, [RH, Score=111, Expect=6e-33]} {Mouse: ENSMUSG00000020265, Sumo3, small ubiquitin-like modifier 3, [RH, Score=115, Expect=1e-34]; ENSMUSG00000020738, Sumo2, small ubiquitin-like modifier 2, [RH, Score=111, Expect=4e-33]} {Dmel: FBgn0264922, smt3, [RH, Score=119, Expect=1e-36]} {Celegans: WBGene00004888, smo-1, Small ubiquitin-related modifier, [RH, Score=93.6, Expect=2e-26]} {Smed: dd_Smed_v6_265_0_1, dd_Smed_v6_265_0_1, [RH, Score=143, Expect=4e-46]} {RNA1509_36383, RNA1509_9891} {RNA1310_33911, RNA1509_36383} {RNA1509_36383, RNA815_5193}
3.	MligTC455_50412	1176	24.51	Mlig455_009876	Neo: Neoblast Age: - Region-enriched R4: 1.347/0.00561	SUMO3	1.768	-	-	-	0.976	-	0.792	Mlig455_009876 {REF} {Length: 896} {TRANSSPLICED} {Pfam: Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=76.8]; Ubiquitin family [PF00240.25, score=39.5]} {Human: ENSG00000184900, SUMO3, small ubiquitin-like modifier 3, [RH, Score=113, Expect=9e-34]; ENSG00000188612, SUMO2, small ubiquitin-like modifier 2, [RH, Score=111, Expect=6e-33]} {Mouse: ENSMUSG00000020265, Sumo3, small ubiquitin-like modifier 3, [RH, Score=115, Expect=1e-34]; ENSMUSG00000020738, Sumo2, small ubiquitin-like modifier 2, [RH, Score=111, Expect=4e-33]} {Dmel: FBgn0264922, smt3, [RH, Score=119, Expect=1e-36]} {Celegans: WBGene00004888, smo-1, Small ubiquitin-related modifier, [RH, Score=93.6, Expect=2e-26]} {Smed: dd_Smed_v6_265_0_1, dd_Smed_v6_265_0_1, [RH, Score=143, Expect=4e-46]} {RNA1509_4113, RNA1509_9891} {RNA1310_38034, RNA1509_4113, RNA1509_9891} {RNA1509_4113, RNA1509_9891, RNA815_5193}
4.	MligTC455_23993	497	10.36	Mlig455_041103	Neo: Neoblast Age: -	ALKBH3	1.725	-	-	-	0.773	-	0.952	Mlig455_041103 {REF} {Length: 3330} {TRANSSPLICED} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13532.8, score=78.6]} {Human: ENSG00000166199, ALKBH3, alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, [Score=135, Expect=5e-36]} {Mouse: ENSMUSG00000040174, Alkbh3, alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase, [Score=137, Expect=9e-37]} {Smed: dd_Smed_v6_7441_0_1, dd_Smed_v6_7441_0_1, [Score=127, Expect=3e-33]} {RNA1509_15049, RNA1509_49703} {RNA1310_16249.1, RNA1509_15049, RNA1509_49703} {RNA1509_15049, RNA1509_49703, RNA815_7570}
5.	MligTC455_48925	628	13.08	Mlig455_021895	Neo: - Age: -	GSTZ1	0.975	-	-	-	-	-	0.975	Mlig455_021895 {REF} {Length: 2292} {TRANSSPLICED} {Pfam: Glutathione S-transferase, N-terminal domain [PF13417.8, score=68.3]; Glutathione S-transferase, N-terminal domain [PF02798.22, score=64.0]; Glutathione S-transferase, N-terminal domain [PF13409.8, score=54.8]} {Human: ENSG00000100577, GSTZ1, glutathione S-transferase zeta 1, [RH, Score=230, Expect=2e-76]} {Mouse: ENSMUSG00000021033, Gstz1, glutathione transferase zeta 1 (maleylacetoacetate isomerase), [RH, Score=238, Expect=2e-79]} {Dmel: FBgn0037697, GstZ2, Glutathione S transferase Z2, [RH, Score=229, Expect=3e-76]} {Celegans: WBGene00001790, gst-42, Probable maleylacetoacetate isomerase, [RH, Score=188, Expect=3e-60]} {Smed: dd_Smed_v6_1703_0_1, dd_Smed_v6_1703_0_1, [RH, Score=225, Expect=5e-75]} {RNA1509_16440, RNA1509_41212, RNA1509_41825, RNA1509_50514, RNA1509_53250} {RNA1310_16659.1, RNA1509_16440, RNA1509_41212, RNA1509_41825, RNA1509_50514, RNA1509_53250} {RNA1509_16440, RNA1509_41212, RNA1509_41825, RNA1509_50514, RNA1509_53250, RNA815_19786}
6.	MligTC455_09744	442	9.22	Mlig455_012700, Mlig455_033013	Neo: - Age: -	N4BP2L1, RPTOR	0.959	-	-	-	0.959	-	-	Mlig455_012700 {REF} {Length: 416} {TRANSSPLICED} {Pfam: AAA domain [PF13671.8, score=25.2]; AAA domain [PF13238.8, score=22.5]; Zeta toxin [PF06414.14, score=19.1]; NACHT domain [PF05729.14, score=18.9]; Chromatin associated protein KTI12 [PF08433.12, score=18.9]} {Human: ENSG00000139597, N4BP2L1, NEDD4 binding protein 2 like 1, [Score=56.6, Expect=9e-11]; ENSG00000244754, N4BP2L2, NEDD4 binding protein 2 like 2, [Score=55.5, Expect=1e-09]} {Mouse: ENSMUSG00000041132, N4bp2l1, NEDD4 binding protein 2-like 1, [Score=56.2, Expect=3e-10]; ENSMUSG00000029655, N4bp2l2, NEDD4 binding protein 2-like 2, [Score=53.9, Expect=3e-09]} {Dmel: FBgn0027532, CG7139, [Score=45.1, Expect=3e-06]} {Smed: dd_Smed_v6_2431_0_1, dd_Smed_v6_2431_0_1, [Score=44.7, Expect=2e-06]} {RNA1509_6309} {RNA1310_4154.2} {RNA815_6777} Mlig455_033013 {REF} {Length: 8330} {TRANSSPLICED} {Pfam: Raptor N-terminal CASPase like domain [PF14538.8, score=192.9]; Smr domain [PF01713.23, score=52.8]; CUE domain [PF02845.18, score=26.4]; Caspase domain [PF00656.24, score=19.5]} {Human: ENSG00000141564, RPTOR, regulatory associated protein of MTOR complex 1, [RH, Score=608, Expect=0.0]} {Mouse: ENSMUSG00000025583, Rptor, regulatory associated protein of MTOR, complex 1, [RH, Score=607, Expect=0.0]} {Dmel: FBgn0029840, raptor, [RH, Score=585, Expect=5e-177]} {Celegans: WBGene00000911, daf-15, DAF-15, [RH, Score=381, Expect=5e-107]} {Smed: dd_Smed_v6_4759_0_1, dd_Smed_v6_4759_0_1, [RH, Score=402, Expect=1e-114]} {RNA1509_6784} {RNA1310_914} {RNA815_3509.1}
7.	MligTC455_24797	1059	22.07	Mlig455_005846	Neo: Neoblast, stringent Age: -	NAA40	0.952	-	-	0.952	-	-	-	Mlig455_005846 {REF} {Length: 2251} {TRANSSPLICED} {Pfam: Acetyltransferase (GNAT) family [PF00583.27, score=31.8]; Acetyltransferase (GNAT) domain [PF13673.9, score=25.7]; Acetyltransferase (GNAT) domain [PF13508.9, score=20.5]} {Human: ENSG00000110583, NAA40, N(alpha)-acetyltransferase 40, NatD catalytic subunit, [RH, Score=125, Expect=5e-35]} {Mouse: ENSMUSG00000024764, Naa40, N(alpha)-acetyltransferase 40, NatD catalytic subunit, [RH, Score=125, Expect=3e-35]} {Dmel: FBgn0039687, Naa40, N(alpha)-acetyltransferase 40, [RH, Score=84.0, Expect=9e-20]} {Celegans: WBGene00021392, Y38A10A.7, [RH, Score=100, Expect=7e-26]} {Smed: dd_Smed_v6_5816_0_1, dd_Smed_v6_5816_0_1, [RH, Score=137, Expect=2e-40]} {RNA1509_10929, RNA1509_12392, RNA1509_16087, RNA1509_22613, RNA1509_41142, RNA1509_7467, RNA1509_9523} {RNA1310_32415.1, RNA1509_10929, RNA1509_12392, RNA1509_16087, RNA1509_22613, RNA1509_41142, RNA1509_7467, RNA1509_9523} {RNA1509_10929, RNA1509_12392, RNA1509_16087, RNA1509_22613, RNA1509_41142, RNA1509_7467, RNA1509_9523, RNA815_15758}
8.	MligTC455_33607	482	10.03	Mlig455_064683	Neo: Int S/G2/M Age: -	KDM1A	0.951	-	-	0.951	-	-	-	Mlig455_064683 {REF} {Length: 3352} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=195.6]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=57.8]; FAD dependent oxidoreductase [PF01266.26, score=30.1]; Thi4 family [PF01946.19, score=29.4]; FAD binding domain [PF00890.26, score=28.9]; FAD binding domain [PF01494.21, score=25.0]; FAD dependent oxidoreductase [PF12831.9, score=23.6]; HI0933-like protein [PF03486.16, score=21.0]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=20.5]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=20.1]} {Human: ENSG00000004487, KDM1A, lysine demethylase 1A, [Score=114, Expect=9e-26]} {Mouse: ENSMUSG00000036940, Kdm1a, lysine (K)-specific demethylase 1A, [Score=115, Expect=5e-26]} {Dmel: FBgn0260397, Su(var)3-3, Suppressor of variegation 3-3, [Score=97.8, Expect=1e-20]} {Celegans: WBGene00000137, amx-1, Amine oxidase family member 1, [Score=106, Expect=1e-23]} {Smed: dd_Smed_v6_10899_0_1, dd_Smed_v6_10899_0_1, [RH, Score=415, Expect=1e-136]} {RNA1509_26570} {RNA1310_9348} {RNA815_2019}
9.	MligTC455_33606	491	10.23	Mlig455_064651	Neo: - Age: -	KDM1A	0.95	-	-	0.950	-	-	-	Mlig455_064651 {REF} {Length: 3833} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=193.0]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=58.0]; FAD dependent oxidoreductase [PF01266.26, score=29.7]; FAD binding domain [PF00890.26, score=28.8]; Thi4 family [PF01946.19, score=27.9]; FAD binding domain [PF01494.21, score=25.8]; FAD dependent oxidoreductase [PF12831.9, score=23.4]; HI0933-like protein [PF03486.16, score=21.3]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=20.0]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=19.8]} {Human: ENSG00000004487, KDM1A, lysine demethylase 1A, [Score=112, Expect=4e-25]} {Mouse: ENSMUSG00000036940, Kdm1a, lysine (K)-specific demethylase 1A, [Score=112, Expect=2e-25]} {Dmel: FBgn0260397, Su(var)3-3, Suppressor of variegation 3-3, [Score=99.8, Expect=2e-21]} {Celegans: WBGene00000137, amx-1, Amine oxidase family member 1, [Score=109, Expect=2e-24]} {Smed: dd_Smed_v6_10899_0_1, dd_Smed_v6_10899_0_1, [RH, Score=415, Expect=2e-136]} {RNA1509_26570} {RNA1310_9348, RNA1509_26570} {RNA1509_26570, RNA815_2019}

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