Data search
Results for MligTC455_21187
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_21187 | 205 | 4.27 | Mlig455_057897 | Neo: - Age: - |
Mlig455_057897 {REF} {Length: 685} {NoTransDecoderORF} {RNA1509_40009} {RNA1310_96325.1, RNA1509_40009} {RNA1509_40009, RNA815_47359.1} |
Cumulative graph for MligTC455_21187
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.479 | 2.576 | 0.33893 | 0.98413 | |
| RegionR2 | 1.257 | 2.576 | 0.07169 | 0.32682 | |
| RegionR3 | -0.055 | 2.576 | 0.91620 | 1.00000 | |
| RegionR4 | -1.512 | 2.576 | 0.01839 | 0.09599 | |
| RegionR5 | 0.018 | 2.576 | 0.97669 | 1.00000 | |
| RegionR6 | 0.308 | 2.576 | 0.56253 | 1.00000 | |
| RegionR7 | 0.818 | 2.576 | 0.23519 | 0.85982 | |
| RegionR8 | 0.645 | 2.576 | 0.47734 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -3.17 | 2.576 | 0.61736 | 1.00000 | |
| RegenerationR2 | 0.701 | 2.576 | 0.18218 | 0.62564 | |
| RegenerationR3 | 0.976 | 2.576 | 0.11723 | 0.53351 | |
| RegenerationR4 | 0.519 | 2.576 | 0.43209 | 0.83181 | |
| RegenerationR5 | 0.739 | 2.576 | 0.13506 | 0.54376 | |
| RegenerationR6 | 0.799 | 2.576 | 0.21031 | 0.55331 | |
| RegenerationBL | -0.564 | 2.576 | 0.59610 | 0.94446 | |
| RegenerationTP | 0.236 | 2.576 | 0.78175 | 1.00000 |
Genes with expression patterns similar to MligTC455_21187
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_21187 | 205 | 4.27 | Mlig455_057897 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_057897 {REF} {Length: 685} {NoTransDecoderORF} {RNA1509_40009} {RNA1310_96325.1, RNA1509_40009} {RNA1509_40009, RNA815_47359.1} | |
| 2. | MligTC455_21121 | 27 | 0.56 | Mlig455_025094 | Neo: - Age: - |
SCAI | 0.979 | - | - | - | 0.979 | - | - | Mlig455_025094 {REF} {Length: 9358} {Pfam: Protein SCAI [PF12070.10, score=76.9]} {Human: ENSG00000173611, SCAI, suppressor of cancer cell invasion, [Score=75.1, Expect=8e-16]} {Mouse: ENSMUSG00000035236, Scai, suppressor of cancer cell invasion, [Score=73.2, Expect=3e-15]} {Dmel: FBgn0035677, CG13293, [Score=79.3, Expect=1e-17]} {Smed: dd_Smed_v6_13420_0_1, dd_Smed_v6_13420_0_1, [Score=77.0, Expect=6e-17]} {RNA1509_46848} {RNA1310_36009.1} {RNA815_29706} |
| 3. | MligTC455_28632 | 262 | 5.45 | Mlig455_037080 | Neo: - Age: Down-Down-Up |
NR1I2 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_037080 {REF} {Length: 3896} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=60.5]; Domain of unknown function (DUF4516) [PF14990.8, score=21.6]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=80.1, Expect=2e-15]; ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=79.7, Expect=1e-15]} {Mouse: ENSMUSG00000005677, Nr1i3, nuclear receptor subfamily 1, group I, member 3, [Score=80.5, Expect=4e-16]; ENSMUSG00000022809, Nr1i2, nuclear receptor subfamily 1, group I, member 2, [Score=79.3, Expect=2e-15]} {Dmel: FBgn0261239, Hr39, Hormone receptor-like in 39, [Score=82.8, Expect=3e-16]} {Celegans: WBGene00003638, nhr-48, Nuclear hormone receptor family member nhr-48, [Score=88.2, Expect=3e-18]} {Smed: dd_Smed_v6_14067_0_2, dd_Smed_v6_14067_0_2, [RH, Score=90.9, Expect=3e-19]} {RNA1509_27608} {RNA1310_7620} {RNA815_14710} |
| 4. | MligTC455_14959 | 38 | 0.8 | Mlig455_039991 | Neo: - Age: - |
0.955 | - | - | - | 0.955 | - | - | Mlig455_039991 {REF} {Length: 749} {Pfam: Protein phosphatase inhibitor 2 (IPP-2) [PF04979.16, score=24.0]} {RNA1310_19355.2} | |
| 5. | MligTC455_40621 | 64 | 1.33 | Mlig455_064871 | Neo: - Age: - Region-enriched R2: 5.335/0.00558 |
KCNK18 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_064871 {REF} {Length: 4779} {Pfam: Ion channel [PF07885.18, score=115.0]; Ion transport protein [PF00520.33, score=28.3]} {Human: ENSG00000186795, KCNK18, potassium two pore domain channel subfamily K member 18, [Score=78.6, Expect=1e-14]} {Mouse: ENSMUSG00000040901, Kcnk18, potassium channel, subfamily K, member 18, [Score=75.9, Expect=8e-14]; ENSMUSG00000023243, Kcnk5, potassium channel, subfamily K, member 5, [Score=74.7, Expect=3e-13]} {Dmel: FBgn0035192, CG9194, [RH, Score=120, Expect=2e-27]} {Celegans: WBGene00006690, twk-39, TWiK family of potassium channels, [Score=116, Expect=2e-26]} {Smed: dd_Smed_v6_15695_0_1, dd_Smed_v6_15695_0_1, [Score=203, Expect=3e-55]} {RNA1509_52667} {RNA1310_10381, RNA1509_52667} {RNA1509_52667, RNA815_19309} |
| 6. | MligTC455_49125 | 91 | 1.89 | Mlig455_051222 | Neo: - Age: - |
0.952 | - | - | - | 0.952 | - | - | Mlig455_051222 {REF} {Length: 2088} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=48.4]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=63.2, Expect=2e-10]} {Celegans: WBGene00020586, frpr-18, FLP-2 receptor; FMRFamide Peptide Receptor family, [Score=59.3, Expect=3e-09]} {Smed: dd_Smed_v6_12500_0_1, dd_Smed_v6_12500_0_1, [RH, Score=241, Expect=3e-74]} {RNA1509_56047} {RNA1310_14299.1} {RNA815_30253} | |
| 7. | MligTC455_01924 | 85 | 1.78 | Mlig455_054751 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_054751 {REF} {Length: 325} {RNA1509_30941} {RNA1310_13121} {RNA815_19376} |
Berezikov Lab - 2020-2021 © ERIBA