TomoSeq data search

Data search

Results for MligTC455_21247

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_21247	95	1.99	Mlig455_030414, Mlig455_051605, Mlig455_058489	Neo: - Age: -	DUT	Mlig455_030414 {REF} {Length: 12470} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=50.8]; Reverse transcriptase thumb domain [PF06817.16, score=18.4]} {RNA1509_10829, RNA1509_13675, RNA1509_20690, RNA1509_29496} {RNA1310_861.1, RNA1509_10829, RNA1509_20690, RNA1509_29496} {RNA1509_10829, RNA1509_20690, RNA1509_29496, RNA815_570.1} Mlig455_051605 {REF} {Length: 615} {TRANSSPLICED} {Pfam: dUTPase [PF00692.21, score=101.6]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=107, Expect=4e-30]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=100, Expect=4e-27]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=90.1, Expect=3e-23]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=104, Expect=6e-27]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=104, Expect=2e-29]} {RNA1509_16992} {RNA1310_861.1} {RNA815_32869.1} Mlig455_058489 {REF} {Length: 623} {TRANSSPLICED} {Pfam: dUTPase [PF00692.21, score=101.6]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=107, Expect=4e-30]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=100, Expect=4e-27]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=90.1, Expect=3e-23]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=104, Expect=6e-27]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=104, Expect=2e-29]} {RNA1509_16992} {RNA1310_861.1} {RNA815_32869.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_21247

1.99

Mlig455_030414, Mlig455_051605, Mlig455_058489

Neo: -

Age: -

DUT

Mlig455_030414 {REF} {Length: 12470} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=50.8]; Reverse transcriptase thumb domain [PF06817.16, score=18.4]} {RNA1509_10829, RNA1509_13675, RNA1509_20690, RNA1509_29496} {RNA1310_861.1, RNA1509_10829, RNA1509_20690, RNA1509_29496} {RNA1509_10829, RNA1509_20690, RNA1509_29496, RNA815_570.1}

Mlig455_051605 {REF} {Length: 615} {TRANSSPLICED} {Pfam: dUTPase [PF00692.21, score=101.6]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=107, Expect=4e-30]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=100, Expect=4e-27]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=90.1, Expect=3e-23]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=104, Expect=6e-27]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=104, Expect=2e-29]} {RNA1509_16992} {RNA1310_861.1} {RNA815_32869.1}

Mlig455_058489 {REF} {Length: 623} {TRANSSPLICED} {Pfam: dUTPase [PF00692.21, score=101.6]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=107, Expect=4e-30]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=100, Expect=4e-27]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=90.1, Expect=3e-23]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=104, Expect=6e-27]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=104, Expect=2e-29]} {RNA1509_16992} {RNA1310_861.1} {RNA815_32869.1}

Cumulative graph for MligTC455_21247

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.536	1.876	0.81603	1.00000
RegionR2	0.827	1.876	0.48156	0.86521
RegionR3	-0.692	1.876	0.59398	1.00000
RegionR4	0.753	1.876	0.47371	0.80151
RegionR5	1.526	1.876	0.09541	0.29574
RegionR6	1.26	1.876	0.25233	0.83825
RegionR7	-1.49	1.876	0.42634	1.00000
RegionR8	-1.647	1.876	0.48725	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-4.994	1.876	0.42050	1.00000
RegenerationR2	-0.156	1.876	0.84281	1.00000
RegenerationR3	1.433	1.876	0.20001	0.63495
RegenerationR4	0.238	1.876	0.79946	0.98621
RegenerationR5	-0.406	1.876	0.65065	0.93263
RegenerationR6	0.551	1.876	0.61395	0.87643
RegenerationBL	-0.956	1.876	0.65372	0.98980
RegenerationTP	0.392	1.876	0.82849	1.00000

Genes with expression patterns similar to MligTC455_21247

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_21247	95	1.99	Mlig455_030414, Mlig455_051605, Mlig455_058489	Neo: - Age: -	DUT	5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_030414 {REF} {Length: 12470} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=50.8]; Reverse transcriptase thumb domain [PF06817.16, score=18.4]} {RNA1509_10829, RNA1509_13675, RNA1509_20690, RNA1509_29496} {RNA1310_861.1, RNA1509_10829, RNA1509_20690, RNA1509_29496} {RNA1509_10829, RNA1509_20690, RNA1509_29496, RNA815_570.1} Mlig455_051605 {REF} {Length: 615} {TRANSSPLICED} {Pfam: dUTPase [PF00692.21, score=101.6]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=107, Expect=4e-30]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=100, Expect=4e-27]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=90.1, Expect=3e-23]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=104, Expect=6e-27]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=104, Expect=2e-29]} {RNA1509_16992} {RNA1310_861.1} {RNA815_32869.1} Mlig455_058489 {REF} {Length: 623} {TRANSSPLICED} {Pfam: dUTPase [PF00692.21, score=101.6]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=107, Expect=4e-30]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=100, Expect=4e-27]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=90.1, Expect=3e-23]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=104, Expect=6e-27]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=104, Expect=2e-29]} {RNA1509_16992} {RNA1310_861.1} {RNA815_32869.1}
2.	MligTC455_22426	28	0.58	Mlig455_037078	Neo: - Age: -		0.973	-	-	-	-	0.973	-	Mlig455_037078 {REF} {Length: 105} {TRANSSPLICED} {NoTransDecoderORF}
3.	MligTC455_21406	34	0.7	Mlig455_025021, Mlig455_062604	Neo: - Age: -		0.966	-	-	-	-	0.966	-	Mlig455_025021 {REF} {Length: 2316} {RNA1310_30090} {RNA815_47725} Mlig455_062604 {REF} {Length: 2106} {RNA1310_30090} {RNA815_47725}
4.	MligTC455_22432	196	4.08	Mlig455_029198	Neo: - Age: - Region-enriched R3: 2.322/0.03362		0.964	-	-	-	-	0.964	-	Mlig455_029198 {REF} {Length: 2065} {RNA1509_24153} {RNA1310_5420} {RNA815_3759}
5.	MligTC455_27189	32	0.67	Mlig455_047567	Neo: Irradiation Age: Up-Down-Up, logFC(26M/2M)=0.463	RIOX1	0.963	-	-	-	-	0.963	-	Mlig455_047567 {REF} {Length: 1998} {TRANSSPLICED} {Pfam: Cupin superfamily protein [PF08007.14, score=211.7]; Cupin-like domain [PF13621.8, score=26.8]} {Human: ENSG00000170468, RIOX1, ribosomal oxygenase 1, [RH, Score=400, Expect=3e-131]} {Mouse: ENSMUSG00000046791, Riox1, ribosomal oxygenase 1, [RH, Score=396, Expect=2e-130]} {Dmel: FBgn0266570, CG2982, [RH, Score=330, Expect=1e-104]} {Celegans: WBGene00020902, jmjc-1, Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66, [RH, Score=272, Expect=9e-82]} {RNA1509_12525} {RNA1310_13539} {RNA815_7796}
6.	MligTC455_18112	126	2.63	Mlig455_014381	Neo: - Age: Down-Down-Up, logFC(26M/2M)=1.401		0.957	-	-	-	-	0.957	-	Mlig455_014381 {REF} {Length: 2520} {RNA1509_23540} {RNA1310_47734} {RNA815_55023}