TomoSeq data search

Data search

Results for MligTC455_21317

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_21317	472	9.84	Mlig455_015183	Neo: - Age: Up-Down-Down	CORO1B	Mlig455_015183 {REF} {Length: 2182} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1899) [PF08953.13, score=110.7]; Type of WD40 repeat [PF16300.7, score=70.1]; WD domain, G-beta repeat [PF00400.34, score=24.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.5]} {Human: ENSG00000172725, CORO1B, coronin 1B, [RH, Score=494, Expect=1e-170]; ENSG00000167549, CORO6, coronin 6, [RH, Score=487, Expect=3e-168]; ENSG00000110880, CORO1C, coronin 1C, [RH, Score=476, Expect=1e-163]} {Mouse: ENSMUSG00000024835, Coro1b, coronin, actin binding protein 1B, [RH, Score=494, Expect=6e-171]; ENSMUSG00000097771, Coro1b, coronin, actin binding protein 1B, [RH, Score=494, Expect=6e-171]; ENSMUSG00000020836, Coro6, coronin 6, [RH, Score=482, Expect=2e-166]; ENSMUSG00000004530, Coro1c, coronin, actin binding protein 1C, [RH, Score=474, Expect=3e-163]} {Dmel: FBgn0265935, coro, [RH, Score=484, Expect=3e-166]} {Celegans: WBGene00000768, cor-1, Coronin-like protein cor-1, [RH, Score=422, Expect=6e-142]} {Smed: dd_Smed_v6_448_0_1, dd_Smed_v6_448_0_1, [RH, Score=526, Expect=0.0]} {RNA1509_13178} {RNA1310_15704} {RNA815_5917}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_21317

472

9.84

Mlig455_015183

Neo: -

Age: Up-Down-Down

CORO1B

Mlig455_015183 {REF} {Length: 2182} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1899) [PF08953.13, score=110.7]; Type of WD40 repeat [PF16300.7, score=70.1]; WD domain, G-beta repeat [PF00400.34, score=24.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.5]} {Human: ENSG00000172725, CORO1B, coronin 1B, [RH, Score=494, Expect=1e-170]; ENSG00000167549, CORO6, coronin 6, [RH, Score=487, Expect=3e-168]; ENSG00000110880, CORO1C, coronin 1C, [RH, Score=476, Expect=1e-163]} {Mouse: ENSMUSG00000024835, Coro1b, coronin, actin binding protein 1B, [RH, Score=494, Expect=6e-171]; ENSMUSG00000097771, Coro1b, coronin, actin binding protein 1B, [RH, Score=494, Expect=6e-171]; ENSMUSG00000020836, Coro6, coronin 6, [RH, Score=482, Expect=2e-166]; ENSMUSG00000004530, Coro1c, coronin, actin binding protein 1C, [RH, Score=474, Expect=3e-163]} {Dmel: FBgn0265935, coro, [RH, Score=484, Expect=3e-166]} {Celegans: WBGene00000768, cor-1, Coronin-like protein cor-1, [RH, Score=422, Expect=6e-142]} {Smed: dd_Smed_v6_448_0_1, dd_Smed_v6_448_0_1, [RH, Score=526, Expect=0.0]} {RNA1509_13178} {RNA1310_15704} {RNA815_5917}

Cumulative graph for MligTC455_21317

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.284	3.452	0.43919	1.00000
RegionR2	0.917	3.452	0.31521	0.70637
RegionR3	-0.857	3.452	0.31326	0.85257
RegionR4	-1.345	3.452	0.12322	0.35273
RegionR5	0.181	3.452	0.79953	1.00000
RegionR6	0.86	3.452	0.24831	0.83421
RegionR7	0.188	3.452	0.83479	1.00000
RegionR8	1.338	3.452	0.12881	0.65857

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.459	3.452	0.46005	1.00000
RegenerationR2	0.335	3.452	0.72357	0.96333
RegenerationR3	1.412	3.452	0.17827	0.61365
RegenerationR4	1.068	3.452	0.29935	0.74127
RegenerationR5	0.091	3.452	0.92905	1.00000
RegenerationR6	0.362	3.452	0.71314	0.93179
RegenerationBL	1.272	3.452	0.15224	0.46636
RegenerationTP	0.997	3.452	0.28929	0.73473

Genes with expression patterns similar to MligTC455_21317

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_21317	472	9.84	Mlig455_015183	Neo: - Age: Up-Down-Down	CORO1B	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_015183 {REF} {Length: 2182} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1899) [PF08953.13, score=110.7]; Type of WD40 repeat [PF16300.7, score=70.1]; WD domain, G-beta repeat [PF00400.34, score=24.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.5]} {Human: ENSG00000172725, CORO1B, coronin 1B, [RH, Score=494, Expect=1e-170]; ENSG00000167549, CORO6, coronin 6, [RH, Score=487, Expect=3e-168]; ENSG00000110880, CORO1C, coronin 1C, [RH, Score=476, Expect=1e-163]} {Mouse: ENSMUSG00000024835, Coro1b, coronin, actin binding protein 1B, [RH, Score=494, Expect=6e-171]; ENSMUSG00000097771, Coro1b, coronin, actin binding protein 1B, [RH, Score=494, Expect=6e-171]; ENSMUSG00000020836, Coro6, coronin 6, [RH, Score=482, Expect=2e-166]; ENSMUSG00000004530, Coro1c, coronin, actin binding protein 1C, [RH, Score=474, Expect=3e-163]} {Dmel: FBgn0265935, coro, [RH, Score=484, Expect=3e-166]} {Celegans: WBGene00000768, cor-1, Coronin-like protein cor-1, [RH, Score=422, Expect=6e-142]} {Smed: dd_Smed_v6_448_0_1, dd_Smed_v6_448_0_1, [RH, Score=526, Expect=0.0]} {RNA1509_13178} {RNA1310_15704} {RNA815_5917}
2.	MligTC455_38674	804	16.74	Mlig455_057215, Mlig455_066650	Neo: - Age: -	MAP3K7	1.703	-	-	0.745	-	0.958	-	Mlig455_057215 {REF} {Length: 2896} {Pfam: Protein kinase domain [PF00069.27, score=158.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=152.2]; Fungal protein kinase [PF17667.3, score=25.3]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=23.2]; MraW methylase family [PF01795.21, score=22.4]} {Human: ENSG00000135341, MAP3K7, mitogen-activated protein kinase kinase kinase 7, [Score=154, Expect=4e-40]} {Mouse: ENSMUSG00000028284, Map3k7, mitogen-activated protein kinase kinase kinase 7, [Score=154, Expect=3e-40]} {Dmel: FBgn0026323, Tak1, TGF-beta activated kinase 1, [Score=115, Expect=1e-26]} {Celegans: WBGene00001008, dlk-1, Mitogen-activated protein kinase kinase kinase dlk-1, [Score=103, Expect=6e-23]} {Smed: dd_Smed_v6_953_0_1, dd_Smed_v6_953_0_1, [Score=128, Expect=1e-31]} {RNA1509_6833} {RNA1310_9609} {RNA815_3249.1} Mlig455_066650 {REF} {Length: 3026} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=120.3]; Protein kinase domain [PF00069.27, score=113.4]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=24.5]} {Human: ENSG00000135341, MAP3K7, mitogen-activated protein kinase kinase kinase 7, [Score=108, Expect=1e-26]} {Mouse: ENSMUSG00000028284, Map3k7, mitogen-activated protein kinase kinase kinase 7, [Score=108, Expect=7e-27]} {Dmel: FBgn0000723, FER, FER tyrosine kinase, [Score=89.7, Expect=1e-20]} {Celegans: WBGene00003931, pat-4, Integrin-linked protein kinase homolog pat-4, [Score=82.8, Expect=4e-18]} {Smed: dd_Smed_v6_953_0_1, dd_Smed_v6_953_0_1, [Score=85.1, Expect=5e-19]} {RNA1509_47567} {RNA1310_11206} {RNA815_3249.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_21317

472

9.84

Mlig455_015183

Neo: -

Age: Up-Down-Down

CORO1B

1.000

MligTC455_38674

804

16.74

Mlig455_057215, Mlig455_066650

Neo: -

Age: -

MAP3K7

1.703

0.745

0.958

Mlig455_057215 {REF} {Length: 2896} {Pfam: Protein kinase domain [PF00069.27, score=158.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=152.2]; Fungal protein kinase [PF17667.3, score=25.3]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=23.2]; MraW methylase family [PF01795.21, score=22.4]} {Human: ENSG00000135341, MAP3K7, mitogen-activated protein kinase kinase kinase 7, [Score=154, Expect=4e-40]} {Mouse: ENSMUSG00000028284, Map3k7, mitogen-activated protein kinase kinase kinase 7, [Score=154, Expect=3e-40]} {Dmel: FBgn0026323, Tak1, TGF-beta activated kinase 1, [Score=115, Expect=1e-26]} {Celegans: WBGene00001008, dlk-1, Mitogen-activated protein kinase kinase kinase dlk-1, [Score=103, Expect=6e-23]} {Smed: dd_Smed_v6_953_0_1, dd_Smed_v6_953_0_1, [Score=128, Expect=1e-31]} {RNA1509_6833} {RNA1310_9609} {RNA815_3249.1}

Mlig455_066650 {REF} {Length: 3026} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=120.3]; Protein kinase domain [PF00069.27, score=113.4]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=24.5]} {Human: ENSG00000135341, MAP3K7, mitogen-activated protein kinase kinase kinase 7, [Score=108, Expect=1e-26]} {Mouse: ENSMUSG00000028284, Map3k7, mitogen-activated protein kinase kinase kinase 7, [Score=108, Expect=7e-27]} {Dmel: FBgn0000723, FER, FER tyrosine kinase, [Score=89.7, Expect=1e-20]} {Celegans: WBGene00003931, pat-4, Integrin-linked protein kinase homolog pat-4, [Score=82.8, Expect=4e-18]} {Smed: dd_Smed_v6_953_0_1, dd_Smed_v6_953_0_1, [Score=85.1, Expect=5e-19]} {RNA1509_47567} {RNA1310_11206} {RNA815_3249.1}