TomoSeq data search

Data search

Results for MligTC455_21333

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_21333

5

0.10

Mlig455_008736

Neo: -

Age: Down-Up-Down

RBM12B

Mlig455_008736 {REF} {Length: 2953} {Pfam: BTB/POZ domain [PF00651.33, score=61.5]} {Human: ENSG00000183808, RBM12B, RNA binding motif protein 12B, [Score=67.8, Expect=6e-11]} {Mouse: ENSMUSG00000052137, Rbm12b2, RNA binding motif protein 12 B2, [Score=52.4, Expect=2e-06]; ENSMUSG00000046667, Rbm12b1, RNA binding motif protein 12 B1, [Score=51.6, Expect=4e-06]} {Celegans: WBGene00006436, ttn-1, Titin homolog, [Score=61.2, Expect=4e-09]} {RNA1509_18377, RNA1509_32983} {RNA1310_5080, RNA1509_32983} {RNA1509_32983, RNA815_7526}

Cumulative graph for MligTC455_21333

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_21333

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_21333	5	0.1	Mlig455_008736	Neo: - Age: Down-Up-Down	RBM12B	1	-	-	-	1.000	-	-	Mlig455_008736 {REF} {Length: 2953} {Pfam: BTB/POZ domain [PF00651.33, score=61.5]} {Human: ENSG00000183808, RBM12B, RNA binding motif protein 12B, [Score=67.8, Expect=6e-11]} {Mouse: ENSMUSG00000052137, Rbm12b2, RNA binding motif protein 12 B2, [Score=52.4, Expect=2e-06]; ENSMUSG00000046667, Rbm12b1, RNA binding motif protein 12 B1, [Score=51.6, Expect=4e-06]} {Celegans: WBGene00006436, ttn-1, Titin homolog, [Score=61.2, Expect=4e-09]} {RNA1509_18377, RNA1509_32983} {RNA1310_5080, RNA1509_32983} {RNA1509_32983, RNA815_7526}
2.	MligTC455_32238	24	0.49	Mlig455_036518	Neo: - Age: -		0.977	-	-	-	0.977	-	-	Mlig455_036518 {REF} {Length: 3936} {NoTransDecoderORF} {RNA1509_32306} {RNA1310_31813} {RNA815_49217.1}
3.	MligTC455_25058	7	0.15	Mlig455_029944	Neo: - Age: Up-Down-Down	HERC2	0.972	-	-	-	0.972	-	-	Mlig455_029944 {REF} {Length: 9352} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=324.8]; HECT-domain (ubiquitin-transferase) [PF00632.27, score=182.7]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=136.1]} {Human: ENSG00000128731, HERC2, HECT and RLD domain containing E3 ubiquitin protein ligase 2, [RH, Score=1546, Expect=0.0]; ENSG00000276802, HERC2, HECT and RLD domain containing E3 ubiquitin protein ligase 2, [RH, Score=1545, Expect=0.0]} {Mouse: ENSMUSG00000030451, Herc2, HECT and RLD domain containing E3 ubiquitin protein ligase 2, [RH, Score=1470, Expect=0.0]} {Dmel: FBgn0031107, HERC2, HECT and RLD domain containing protein 2, [RH, Score=1266, Expect=0.0]} {Celegans: WBGene00022358, Y92H12A.2, E3 ubiquitin-protein ligase, [Score=116, Expect=8e-27]} {Smed: dd_Smed_v6_3885_0_1, dd_Smed_v6_3885_0_1, [RH, Score=1101, Expect=0.0]} {RNA1509_2217, RNA1509_56877} {RNA1310_95.1, RNA1509_56877} {RNA1509_56877, RNA815_620}
4.	MligTC455_57672	7	0.15	Mlig455_011725	Neo: - Age: -		0.964	-	-	-	0.964	-	-	Mlig455_011725 {REF} {Length: 143} {NoTransDecoderORF} {RNA1509_23090} {RNA1310_39300} {RNA815_16869}
5.	MligTC455_49664	37	0.78	Mlig455_013619	Neo: - Age: -	CDH23	0.954	-	-	-	0.954	-	-	Mlig455_013619 {REF} {Length: 7298} {Pfam: Cadherin domain [PF00028.19, score=360.9]; Cadherin-like [PF08266.14, score=37.5]} {Human: ENSG00000107736, CDH23, cadherin related 23, [Score=372, Expect=1e-103]} {Mouse: ENSMUSG00000012819, Cdh23, cadherin 23 (otocadherin), [Score=374, Expect=2e-104]} {Dmel: FBgn0038247, Cad88C, Cadherin 88C, [Score=362, Expect=3e-101]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=224, Expect=2e-58]} {Smed: dd_Smed_v6_15356_0_1, dd_Smed_v6_15356_0_1, [Score=414, Expect=2e-118]} {RNA1509_16482} {RNA1310_682} {RNA815_249}
6.	MligTC455_10398	5	0.09	Mlig455_039953	Neo: - Age: -		0.953	-	-	-	0.953	-	-	Mlig455_039953 {REF} {Length: 1319} {NoTransDecoderORF} {RNA1509_48793} {RNA1310_45877} {RNA815_9578.1}
7.	MligTC455_09938	37	0.78	Mlig455_063017	Neo: - Age: -		0.952	-	-	-	0.952	-	-	Mlig455_063017 {REF} {Length: 881} {NoTransDecoderORF}
8.	MligTC455_34497	50	1.03	Mlig455_057540, Mlig455_058243, Mlig455_068776, Mlig455_069555	Neo: - Age: -		0.952	-	-	-	0.952	-	-	Mlig455_057540 {REF} {Length: 1160} {NoTransDecoderORF} {RNA1509_52345} {RNA1310_90874} {RNA815_25651.2} Mlig455_058243 {REF} {Length: 682} {NoTransDecoderORF} {RNA1310_33089.1} {RNA815_25651.2} Mlig455_068776 {REF} {Length: 1284} {NoTransDecoderORF} {RNA1310_33089.1} {RNA815_25651.2} Mlig455_069555 {REF} {Length: 973} {NoTransDecoderORF} {RNA1509_10641} {RNA1310_33089.1} {RNA815_25651.2}
9.	MligTC455_10234	22	0.45	Mlig455_010257	Neo: - Age: -		0.951	-	-	-	0.951	-	-	Mlig455_010257 {REF} {Length: 385} {NoTransDecoderORF} {RNA1509_22999} {RNA1310_20268} {RNA815_55028}
10.	MligTC455_30756	66	1.36	Mlig455_031771, Mlig455_054714	Neo: - Age: logFC(26M/2M)=-0.696	ANK1	0.951	-	-	-	0.951	-	-	Mlig455_031771 {REF} {Length: 3793} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=184.4]; Ankyrin repeat [PF00023.32, score=135.6]; Ankyrin repeats (many copies) [PF13637.8, score=126.2]; Ankyrin repeat [PF13606.8, score=121.3]; Ankyrin repeats (many copies) [PF13857.8, score=105.1]; Mab-21 protein [PF03281.16, score=32.0]; Nucleoplasmin/nucleophosmin domain [PF03066.17, score=19.9]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=155, Expect=1e-37]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=159, Expect=2e-39]} {Dmel: FBgn0031473, CG3104, [Score=156, Expect=7e-42]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=150, Expect=1e-36]} {Smed: dd_Smed_v6_2072_0_20, dd_Smed_v6_2072_0_20, [Score=147, Expect=1e-35]} {RNA1509_26004} {RNA1310_3906.1} {RNA815_1664.1} Mlig455_054714 {REF} {Length: 4487} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=443.9]; Ankyrin repeat [PF00023.32, score=286.8]; Ankyrin repeats (many copies) [PF13637.8, score=245.9]; Ankyrin repeats (many copies) [PF13857.8, score=223.5]; Ankyrin repeat [PF13606.8, score=222.5]; Glutamine amidotransferase domain [PF13537.8, score=32.6]; Mab-21 protein [PF03281.16, score=31.6]; PEGA domain [PF08308.13, score=26.0]; Nucleoplasmin/nucleophosmin domain [PF03066.17, score=23.6]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=265, Expect=7e-72]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=257, Expect=2e-69]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=248, Expect=3e-66]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=237, Expect=3e-67]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=258, Expect=4e-70]} {Smed: dd_Smed_v6_10835_0_2, dd_Smed_v6_10835_0_2, [Score=255, Expect=4e-69]} {RNA1509_26004} {RNA1310_3906.1} {RNA815_1664.1}

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