TomoSeq data search

Data search

Results for MligTC455_21356

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_21356	511	10.64	Mlig455_039078, Mlig455_039079, Mlig455_039080	Neo: - Age: Up-Up-Down		Mlig455_039078 {REF} {Length: 1761} {Pfam: Pentapeptide repeats (9 copies) [PF13599.8, score=34.8]} {RNA1509_48753} {RNA1310_52172.1} {RNA815_28277.1} Mlig455_039079 {REF} {Length: 165} {Pfam: Pentapeptide repeats (9 copies) [PF13599.8, score=34.8]} {RNA1509_56880} {RNA1310_109695.1} Mlig455_039080 {REF} {Length: 168} {Pfam: Pentapeptide repeats (9 copies) [PF13599.8, score=34.8]} {RNA1509_56880} {RNA1310_109695.2, RNA1509_56880}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_21356

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.756	3.824	0.50469	1.00000
RegionR2	0.445	3.824	0.35563	0.74983
RegionR3	0.399	3.824	0.27661	0.82038
RegionR4	0.01	3.824	0.98081	1.00000
RegionR5	-0.39	3.824	0.28557	0.61560
RegionR6	0.201	3.824	0.60791	1.00000
RegionR7	-0.356	3.824	0.50820	1.00000
RegionR8	0.447	3.824	0.43744	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.829	3.824	0.23021	0.96044
RegenerationR2	0.012	3.824	0.97434	1.00000
RegenerationR3	-0.205	3.824	0.64136	0.92533
RegenerationR4	-0.414	3.824	0.37017	0.79394
RegenerationR5	0.471	3.824	0.26052	0.69215
RegenerationR6	-0.006	3.824	0.99118	1.00000
RegenerationBL	-1.137	3.824	0.09951	0.37064
RegenerationTP	0.3	3.824	0.60186	0.96181

Genes with expression patterns similar to MligTC455_21356

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_21356	511	10.64	Mlig455_039078, Mlig455_039079, Mlig455_039080	Neo: - Age: Up-Up-Down		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_039078 {REF} {Length: 1761} {Pfam: Pentapeptide repeats (9 copies) [PF13599.8, score=34.8]} {RNA1509_48753} {RNA1310_52172.1} {RNA815_28277.1} Mlig455_039079 {REF} {Length: 165} {Pfam: Pentapeptide repeats (9 copies) [PF13599.8, score=34.8]} {RNA1509_56880} {RNA1310_109695.1} Mlig455_039080 {REF} {Length: 168} {Pfam: Pentapeptide repeats (9 copies) [PF13599.8, score=34.8]} {RNA1509_56880} {RNA1310_109695.2, RNA1509_56880}
2.	MligTC455_49902	596	12.42	Mlig455_029392, Mlig455_029428	Neo: - Age: -	ARF5	1.767	-	-	0.791	-	-	0.976	Mlig455_029392 {REF} {Length: 2843} {Pfam: ADP-ribosylation factor family [PF00025.23, score=190.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=46.7]; Ras family [PF00071.24, score=45.1]; Signal recognition particle receptor beta subunit [PF09439.12, score=38.4]; G-protein alpha subunit [PF00503.22, score=35.7]; 50S ribosome-binding GTPase [PF01926.25, score=20.7]} {Human: ENSG00000004059, ARF5, ADP ribosylation factor 5, [Score=189, Expect=8e-61]; ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=187, Expect=4e-60]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=184, Expect=7e-59]; ENSG00000168374, ARF4, ADP ribosylation factor 4, [Score=183, Expect=2e-58]} {Mouse: ENSMUSG00000020440, Arf5, ADP-ribosylation factor 5, [Score=189, Expect=6e-61]; ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [Score=187, Expect=2e-60]; ENSMUSG00000062421, Arf2, ADP-ribosylation factor 2, [Score=184, Expect=4e-59]; ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [Score=184, Expect=5e-59]; ENSMUSG00000115861, Arf4, ADP-ribosylation factor 4, [Score=181, Expect=1e-57]; ENSMUSG00000021877, Arf4, ADP-ribosylation factor 4, [Score=181, Expect=1e-57]} {Dmel: FBgn0010348, Arf79F, ADP ribosylation factor at 79F, [Score=185, Expect=1e-59]} {Celegans: WBGene00000182, arf-1.2, ADP-ribosylation factor 1-like 2, [Score=187, Expect=2e-60]} {Smed: dd_Smed_v6_864_0_1, dd_Smed_v6_864_0_1, [Score=191, Expect=5e-62]} {RNA1509_27886} {RNA1310_32816} {RNA815_17570} Mlig455_029428 {REF} {Length: 1977} {Pfam: ADP-ribosylation factor family [PF00025.23, score=187.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=44.6]; Ras family [PF00071.24, score=42.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=35.7]; G-protein alpha subunit [PF00503.22, score=32.3]; 50S ribosome-binding GTPase [PF01926.25, score=19.4]} {Human: ENSG00000004059, ARF5, ADP ribosylation factor 5, [Score=189, Expect=7e-61]; ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=188, Expect=2e-60]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=185, Expect=4e-59]; ENSG00000168374, ARF4, ADP ribosylation factor 4, [Score=183, Expect=1e-58]} {Mouse: ENSMUSG00000020440, Arf5, ADP-ribosylation factor 5, [Score=189, Expect=4e-61]; ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [Score=188, Expect=1e-60]; ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [Score=185, Expect=3e-59]; ENSMUSG00000062421, Arf2, ADP-ribosylation factor 2, [Score=185, Expect=2e-59]; ENSMUSG00000021877, Arf4, ADP-ribosylation factor 4, [Score=181, Expect=1e-57]; ENSMUSG00000115861, Arf4, ADP-ribosylation factor 4, [Score=181, Expect=1e-57]} {Dmel: FBgn0010348, Arf79F, ADP ribosylation factor at 79F, [Score=186, Expect=4e-60]} {Celegans: WBGene00000182, arf-1.2, ADP-ribosylation factor 1-like 2, [Score=188, Expect=8e-61]} {Smed: dd_Smed_v6_864_0_1, dd_Smed_v6_864_0_1, [Score=189, Expect=3e-61]} {RNA1509_27886} {RNA1310_32816, RNA1509_27886} {RNA1509_27886, RNA815_17570}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_21356

511

10.64

Mlig455_039078, Mlig455_039079, Mlig455_039080

Neo: -

Age: Up-Up-Down

1.000

Mlig455_039078 {REF} {Length: 1761} {Pfam: Pentapeptide repeats (9 copies) [PF13599.8, score=34.8]} {RNA1509_48753} {RNA1310_52172.1} {RNA815_28277.1}

Mlig455_039079 {REF} {Length: 165} {Pfam: Pentapeptide repeats (9 copies) [PF13599.8, score=34.8]} {RNA1509_56880} {RNA1310_109695.1}

Mlig455_039080 {REF} {Length: 168} {Pfam: Pentapeptide repeats (9 copies) [PF13599.8, score=34.8]} {RNA1509_56880} {RNA1310_109695.2, RNA1509_56880}

MligTC455_49902

596

12.42

Mlig455_029392, Mlig455_029428

Neo: -

Age: -

ARF5

1.767

0.791

0.976

Mlig455_029392 {REF} {Length: 2843} {Pfam: ADP-ribosylation factor family [PF00025.23, score=190.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=46.7]; Ras family [PF00071.24, score=45.1]; Signal recognition particle receptor beta subunit [PF09439.12, score=38.4]; G-protein alpha subunit [PF00503.22, score=35.7]; 50S ribosome-binding GTPase [PF01926.25, score=20.7]} {Human: ENSG00000004059, ARF5, ADP ribosylation factor 5, [Score=189, Expect=8e-61]; ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=187, Expect=4e-60]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=184, Expect=7e-59]; ENSG00000168374, ARF4, ADP ribosylation factor 4, [Score=183, Expect=2e-58]} {Mouse: ENSMUSG00000020440, Arf5, ADP-ribosylation factor 5, [Score=189, Expect=6e-61]; ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [Score=187, Expect=2e-60]; ENSMUSG00000062421, Arf2, ADP-ribosylation factor 2, [Score=184, Expect=4e-59]; ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [Score=184, Expect=5e-59]; ENSMUSG00000115861, Arf4, ADP-ribosylation factor 4, [Score=181, Expect=1e-57]; ENSMUSG00000021877, Arf4, ADP-ribosylation factor 4, [Score=181, Expect=1e-57]} {Dmel: FBgn0010348, Arf79F, ADP ribosylation factor at 79F, [Score=185, Expect=1e-59]} {Celegans: WBGene00000182, arf-1.2, ADP-ribosylation factor 1-like 2, [Score=187, Expect=2e-60]} {Smed: dd_Smed_v6_864_0_1, dd_Smed_v6_864_0_1, [Score=191, Expect=5e-62]} {RNA1509_27886} {RNA1310_32816} {RNA815_17570}

Mlig455_029428 {REF} {Length: 1977} {Pfam: ADP-ribosylation factor family [PF00025.23, score=187.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=44.6]; Ras family [PF00071.24, score=42.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=35.7]; G-protein alpha subunit [PF00503.22, score=32.3]; 50S ribosome-binding GTPase [PF01926.25, score=19.4]} {Human: ENSG00000004059, ARF5, ADP ribosylation factor 5, [Score=189, Expect=7e-61]; ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=188, Expect=2e-60]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=185, Expect=4e-59]; ENSG00000168374, ARF4, ADP ribosylation factor 4, [Score=183, Expect=1e-58]} {Mouse: ENSMUSG00000020440, Arf5, ADP-ribosylation factor 5, [Score=189, Expect=4e-61]; ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [Score=188, Expect=1e-60]; ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [Score=185, Expect=3e-59]; ENSMUSG00000062421, Arf2, ADP-ribosylation factor 2, [Score=185, Expect=2e-59]; ENSMUSG00000021877, Arf4, ADP-ribosylation factor 4, [Score=181, Expect=1e-57]; ENSMUSG00000115861, Arf4, ADP-ribosylation factor 4, [Score=181, Expect=1e-57]} {Dmel: FBgn0010348, Arf79F, ADP ribosylation factor at 79F, [Score=186, Expect=4e-60]} {Celegans: WBGene00000182, arf-1.2, ADP-ribosylation factor 1-like 2, [Score=188, Expect=8e-61]} {Smed: dd_Smed_v6_864_0_1, dd_Smed_v6_864_0_1, [Score=189, Expect=3e-61]} {RNA1509_27886} {RNA1310_32816, RNA1509_27886} {RNA1509_27886, RNA815_17570}