TomoSeq data search

Data search

Results for MligTC455_21420

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_21420

710

14.80

Mlig455_015775, Mlig455_049502

Neo: -

Age: -

MAPK3

Mlig455_015775 {REF} {Length: 4059} {Pfam: Protein kinase domain [PF00069.27, score=230.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=120.6]; Phosphotransferase enzyme family [PF01636.25, score=20.0]} {Human: ENSG00000102882, MAPK3, mitogen-activated protein kinase 3, [RH, Score=561, Expect=0.0]; ENSG00000100030, MAPK1, mitogen-activated protein kinase 1, [RH, Score=557, Expect=0.0]} {Mouse: ENSMUSG00000063358, Mapk1, mitogen-activated protein kinase 1, [RH, Score=557, Expect=0.0]; ENSMUSG00000063065, Mapk3, mitogen-activated protein kinase 3, [RH, Score=555, Expect=0.0]} {Dmel: FBgn0003256, rl, rolled, [RH, Score=547, Expect=0.0]} {Celegans: WBGene00003401, mpk-1, Mitogen-activated protein kinase mpk-1, [RH, Score=542, Expect=0.0]} {Smed: dd_Smed_v6_9632_0_1, dd_Smed_v6_9632_0_1, [RH, Score=583, Expect=0.0]} {RNA1509_10604, RNA1509_41064} {RNA1310_21097.1, RNA1509_10604, RNA1509_41064} {RNA1509_10604, RNA1509_41064, RNA815_11151}

Mlig455_049502 {REF} {Length: 3306} {Pfam: Protein kinase domain [PF00069.27, score=230.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.2]; Phosphotransferase enzyme family [PF01636.25, score=19.9]} {Human: ENSG00000102882, MAPK3, mitogen-activated protein kinase 3, [RH, Score=563, Expect=0.0]; ENSG00000100030, MAPK1, mitogen-activated protein kinase 1, [RH, Score=560, Expect=0.0]} {Mouse: ENSMUSG00000063358, Mapk1, mitogen-activated protein kinase 1, [RH, Score=559, Expect=0.0]; ENSMUSG00000063065, Mapk3, mitogen-activated protein kinase 3, [RH, Score=558, Expect=0.0]} {Dmel: FBgn0003256, rl, rolled, [RH, Score=542, Expect=0.0]} {Celegans: WBGene00003401, mpk-1, Mitogen-activated protein kinase mpk-1, [RH, Score=541, Expect=0.0]} {Smed: dd_Smed_v6_9632_0_1, dd_Smed_v6_9632_0_1, [RH, Score=579, Expect=0.0]} {RNA1509_10604, RNA1509_31192, RNA1509_44289} {RNA1310_21097.1, RNA1509_31192, RNA1509_44289} {RNA1509_31192, RNA1509_44289, RNA815_11151}

Cumulative graph for MligTC455_21420

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.788	4.2	0.47708	1.00000
RegionR2	-0.471	4.2	0.48300	0.86676
RegionR3	-0.499	4.2	0.37657	0.90950
RegionR4	0.811	4.2	0.20816	0.49174
RegionR5	0.025	4.2	0.96418	1.00000
RegionR6	-0.488	4.2	0.38449	0.96228
RegionR7	-0.222	4.2	0.72568	1.00000
RegionR8	0.056	4.2	0.94325	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.363	4.2	0.06547	0.74295
RegenerationR2	0.121	4.2	0.84819	1.00000
RegenerationR3	-0.341	4.2	0.61651	0.91549
RegenerationR4	-0.479	4.2	0.48857	0.86368
RegenerationR5	-0.05	4.2	0.93812	1.00000
RegenerationR6	-0.591	4.2	0.40980	0.74391
RegenerationBL	-0.837	4.2	0.25777	0.61493
RegenerationTP	-1.322	4.2	0.10533	0.50250

Genes with expression patterns similar to MligTC455_21420

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_21420	710	14.8	Mlig455_015775, Mlig455_049502	Neo: - Age: -	MAPK3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_015775 {REF} {Length: 4059} {Pfam: Protein kinase domain [PF00069.27, score=230.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=120.6]; Phosphotransferase enzyme family [PF01636.25, score=20.0]} {Human: ENSG00000102882, MAPK3, mitogen-activated protein kinase 3, [RH, Score=561, Expect=0.0]; ENSG00000100030, MAPK1, mitogen-activated protein kinase 1, [RH, Score=557, Expect=0.0]} {Mouse: ENSMUSG00000063358, Mapk1, mitogen-activated protein kinase 1, [RH, Score=557, Expect=0.0]; ENSMUSG00000063065, Mapk3, mitogen-activated protein kinase 3, [RH, Score=555, Expect=0.0]} {Dmel: FBgn0003256, rl, rolled, [RH, Score=547, Expect=0.0]} {Celegans: WBGene00003401, mpk-1, Mitogen-activated protein kinase mpk-1, [RH, Score=542, Expect=0.0]} {Smed: dd_Smed_v6_9632_0_1, dd_Smed_v6_9632_0_1, [RH, Score=583, Expect=0.0]} {RNA1509_10604, RNA1509_41064} {RNA1310_21097.1, RNA1509_10604, RNA1509_41064} {RNA1509_10604, RNA1509_41064, RNA815_11151} Mlig455_049502 {REF} {Length: 3306} {Pfam: Protein kinase domain [PF00069.27, score=230.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.2]; Phosphotransferase enzyme family [PF01636.25, score=19.9]} {Human: ENSG00000102882, MAPK3, mitogen-activated protein kinase 3, [RH, Score=563, Expect=0.0]; ENSG00000100030, MAPK1, mitogen-activated protein kinase 1, [RH, Score=560, Expect=0.0]} {Mouse: ENSMUSG00000063358, Mapk1, mitogen-activated protein kinase 1, [RH, Score=559, Expect=0.0]; ENSMUSG00000063065, Mapk3, mitogen-activated protein kinase 3, [RH, Score=558, Expect=0.0]} {Dmel: FBgn0003256, rl, rolled, [RH, Score=542, Expect=0.0]} {Celegans: WBGene00003401, mpk-1, Mitogen-activated protein kinase mpk-1, [RH, Score=541, Expect=0.0]} {Smed: dd_Smed_v6_9632_0_1, dd_Smed_v6_9632_0_1, [RH, Score=579, Expect=0.0]} {RNA1509_10604, RNA1509_31192, RNA1509_44289} {RNA1310_21097.1, RNA1509_31192, RNA1509_44289} {RNA1509_31192, RNA1509_44289, RNA815_11151}
2.	MligTC455_18521	960	20	Mlig455_017584, Mlig455_058804, Mlig455_058856	Neo: - Age: Up-Down-Down Region-enriched R4: 2.261/0.00824		1.795	-	-	-	0.953	0.842	-	Mlig455_017584 {REF} {Length: 3536} {TRANSSPLICED} {Pfam: TIR domain [PF13676.8, score=81.0]; TIR domain [PF01582.22, score=22.1]} {Smed: dd_Smed_v6_5359_0_2, dd_Smed_v6_5359_0_2, [RH, Score=216, Expect=8e-61]} {RNA1509_11386} {RNA1310_4935, RNA1509_11386} {RNA1509_11386, RNA815_1498.1} Mlig455_058804 {REF} {Length: 3617} {TRANSSPLICED} {Pfam: TIR domain [PF13676.8, score=81.0]; TIR domain [PF01582.22, score=21.3]} {Smed: dd_Smed_v6_5359_0_2, dd_Smed_v6_5359_0_2, [RH, Score=216, Expect=1e-60]} {RNA1509_11386} {RNA1310_4935} {RNA815_1498.1} Mlig455_058856 {REF} {Length: 3787} {Pfam: TIR domain [PF13676.8, score=80.9]; TIR domain [PF01582.22, score=22.1]} {Smed: dd_Smed_v6_5359_0_2, dd_Smed_v6_5359_0_2, [RH, Score=216, Expect=1e-60]} {RNA1509_11386} {RNA1310_4935} {RNA815_1498.1}
3.	MligTC455_40411	1165	24.27	Mlig455_006865, Mlig455_016512	Neo: - Age: Up-Down-Down Region-enriched R4: 1.288/0.00826	RPS6KA2	0.966	-	-	-	0.966	-	-	Mlig455_006865 {REF} {Length: 3950} {Pfam: Protein kinase domain [PF00069.27, score=197.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=127.6]; Fungal protein kinase [PF17667.3, score=24.3]} {Human: ENSG00000071242, RPS6KA2, ribosomal protein S6 kinase A2, [Score=174, Expect=2e-46]; ENSG00000177189, RPS6KA3, ribosomal protein S6 kinase A3, [Score=171, Expect=2e-45]; ENSG00000072133, RPS6KA6, ribosomal protein S6 kinase A6, [Score=168, Expect=2e-44]; ENSG00000281877, RPS6KA1, ribosomal protein S6 kinase A1, [Score=168, Expect=2e-44]; ENSG00000117676, RPS6KA1, ribosomal protein S6 kinase A1, [Score=168, Expect=2e-44]} {Mouse: ENSMUSG00000023809, Rps6ka2, ribosomal protein S6 kinase, polypeptide 2, [Score=173, Expect=1e-46]; ENSMUSG00000031309, Rps6ka3, ribosomal protein S6 kinase polypeptide 3, [Score=171, Expect=1e-45]; ENSMUSG00000003644, Rps6ka1, ribosomal protein S6 kinase polypeptide 1, [Score=167, Expect=2e-44]; ENSMUSG00000025665, Rps6ka6, ribosomal protein S6 kinase polypeptide 6, [Score=167, Expect=2e-44]; ENSMUSG00000116203, Rps6ka6, ribosomal protein S6 kinase polypeptide 6, [Score=167, Expect=2e-44]} {Dmel: FBgn0261854, aPKC, atypical protein kinase C, [Score=156, Expect=1e-41]} {Celegans: WBGene00044281, R04A9.7, [Score=179, Expect=5e-51]} {Smed: dd_Smed_v6_5658_0_1, dd_Smed_v6_5658_0_1, [Score=171, Expect=4e-47]} {RNA1509_11131} {RNA1310_7164} {RNA815_13024.1} Mlig455_016512 {REF} {Length: 4608} {Pfam: Protein kinase domain [PF00069.27, score=199.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=129.0]; Fungal protein kinase [PF17667.3, score=24.9]} {Human: ENSG00000071242, RPS6KA2, ribosomal protein S6 kinase A2, [Score=172, Expect=6e-47]; ENSG00000177189, RPS6KA3, ribosomal protein S6 kinase A3, [Score=170, Expect=3e-46]; ENSG00000072133, RPS6KA6, ribosomal protein S6 kinase A6, [Score=168, Expect=2e-45]; ENSG00000117676, RPS6KA1, ribosomal protein S6 kinase A1, [Score=166, Expect=9e-45]; ENSG00000281877, RPS6KA1, ribosomal protein S6 kinase A1, [Score=166, Expect=9e-45]} {Mouse: ENSMUSG00000023809, Rps6ka2, ribosomal protein S6 kinase, polypeptide 2, [Score=172, Expect=5e-47]; ENSMUSG00000031309, Rps6ka3, ribosomal protein S6 kinase polypeptide 3, [Score=170, Expect=2e-46]; ENSMUSG00000025665, Rps6ka6, ribosomal protein S6 kinase polypeptide 6, [Score=167, Expect=3e-45]; ENSMUSG00000116203, Rps6ka6, ribosomal protein S6 kinase polypeptide 6, [Score=167, Expect=3e-45]; ENSMUSG00000003644, Rps6ka1, ribosomal protein S6 kinase polypeptide 1, [Score=165, Expect=1e-44]} {Dmel: FBgn0261854, aPKC, atypical protein kinase C, [Score=159, Expect=2e-43]} {Celegans: WBGene00044281, R04A9.7, [Score=182, Expect=2e-53]} {Smed: dd_Smed_v6_5658_0_1, dd_Smed_v6_5658_0_1, [Score=171, Expect=2e-48]} {RNA1509_11131, RNA1509_9936} {RNA1310_7164, RNA1509_11131, RNA1509_9936} {RNA1509_11131, RNA1509_9936, RNA815_13024.1}
4.	MligTC455_20850	1618	33.71	Mlig455_021473, Mlig455_067356	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.171	MAF1	0.961	-	-	-	0.961	-	-	Mlig455_021473 {REF} {Length: 2464} {Pfam: Maf1 regulator [PF09174.12, score=163.9]} {Human: ENSG00000179632, MAF1, MAF1 homolog, negative regulator of RNA polymerase III, [RH, Score=148, Expect=9e-43]} {Mouse: ENSMUSG00000022553, Maf1, MAF1 homolog, negative regulator of RNA polymerase III, [RH, Score=145, Expect=8e-42]} {Dmel: FBgn0267861, Maf1, [RH, Score=156, Expect=1e-46]} {Celegans: WBGene00016622, mafr-1, Repressor of RNA polymerase III transcription MAF1, [RH, Score=100, Expect=4e-25]} {RNA1509_23418, RNA1509_44779} {RNA1310_20653.1, RNA1509_44779} {RNA1509_44779, RNA815_7842.1} Mlig455_067356 {REF} {Length: 2464} {Pfam: Maf1 regulator [PF09174.12, score=163.9]} {Human: ENSG00000179632, MAF1, MAF1 homolog, negative regulator of RNA polymerase III, [RH, Score=148, Expect=9e-43]} {Mouse: ENSMUSG00000022553, Maf1, MAF1 homolog, negative regulator of RNA polymerase III, [RH, Score=145, Expect=8e-42]} {Dmel: FBgn0267861, Maf1, [RH, Score=156, Expect=1e-46]} {Celegans: WBGene00016622, mafr-1, Repressor of RNA polymerase III transcription MAF1, [RH, Score=100, Expect=4e-25]} {RNA1509_13113, RNA1509_23418, RNA1509_24039} {RNA1310_20653.1, RNA1509_13113, RNA1509_23418, RNA1509_24039} {RNA1509_13113, RNA1509_23418, RNA1509_24039, RNA815_7842.1}
5.	MligTC455_15872	488	10.16	Mlig455_044709	Neo: - Age: - Region-enriched R5: 2.100/0.00733	SRD5A1	0.956	-	-	-	-	-	0.956	Mlig455_044709 {REF} {Length: 891} {Pfam: 3-oxo-5-alpha-steroid 4-dehydrogenase [PF02544.18, score=160.3]; Protein of unknown function (DUF1295) [PF06966.14, score=19.3]} {Human: ENSG00000145545, SRD5A1, steroid 5 alpha-reductase 1, [Score=167, Expect=9e-52]; ENSG00000277893, SRD5A2, steroid 5 alpha-reductase 2, [Score=160, Expect=4e-49]} {Mouse: ENSMUSG00000021594, Srd5a1, steroid 5 alpha-reductase 1, [Score=192, Expect=1e-61]} {Dmel: FBgn0032014, CG7840, [Score=55.8, Expect=2e-09]} {Celegans: WBGene00009635, F42F12.3, [Score=142, Expect=2e-42]} {Smed: dd_Smed_v6_11914_0_1, dd_Smed_v6_11914_0_1, [Score=157, Expect=2e-48]} {RNA1509_59173} {RNA1310_18838.1} {RNA815_12433.1}
6.	MligTC455_43009	84	1.76	Mlig455_028315	Neo: - Age: -	NKX1-1	0.953	-	-	-	-	0.953	-	Mlig455_028315 {REF} {Length: 3063} {Pfam: Homeodomain [PF00046.31, score=75.2]} {Human: ENSG00000235608, NKX1-1, NK1 homeobox 1, [Score=140, Expect=6e-38]; ENSG00000229544, NKX1-2, NK1 homeobox 2, [Score=134, Expect=3e-36]} {Mouse: ENSMUSG00000029112, Nkx1-1, NK1 homeobox 1, [Score=146, Expect=2e-40]} {Dmel: FBgn0002941, slou, slouch, [RH, Score=152, Expect=2e-41]} {Celegans: WBGene00000428, ceh-1, Homeobox protein ceh-1, [Score=132, Expect=9e-38]} {Smed: dd_Smed_v6_19327_0_1, dd_Smed_v6_19327_0_1, [Score=145, Expect=1e-40]} {RNA1310_40325} {RNA815_61269}
7.	MligTC455_17671	47	0.98	Mlig455_060491	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_060491 {REF} {Length: 2750} {NoTransDecoderORF} {RNA1509_37486} {RNA1310_54084} {RNA815_52616}
8.	MligTC455_23162	1050	21.88	Mlig455_037883, Mlig455_039045	Neo: - Age: logFC(26M/2M)=-0.251	CFAP221	0.95	-	-	-	-	-	0.950	Mlig455_037883 {REF} {Length: 4007} {TRANSSPLICED} {Pfam: Flagellar-associated PapD-like [PF14874.8, score=32.3]; Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin [PF15780.7, score=20.3]} {Human: ENSG00000163075, CFAP221, cilia and flagella associated protein 221, [RH, Score=403, Expect=4e-126]} {Mouse: ENSMUSG00000036962, Cfap221, cilia and flagella associated protein 221, [RH, Score=389, Expect=9e-121]} {Smed: dd_Smed_v6_12752_0_1, dd_Smed_v6_12752_0_1, [RH, Score=250, Expect=1e-71]} {RNA1509_8718} {RNA1310_5638.1} {RNA815_9138} Mlig455_039045 {REF} {Length: 3771} {TRANSSPLICED} {Pfam: Flagellar-associated PapD-like [PF14874.8, score=32.4]; Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin [PF15780.7, score=20.3]} {Human: ENSG00000163075, CFAP221, cilia and flagella associated protein 221, [RH, Score=401, Expect=2e-125]} {Mouse: ENSMUSG00000036962, Cfap221, cilia and flagella associated protein 221, [RH, Score=387, Expect=2e-120]} {Smed: dd_Smed_v6_12752_0_1, dd_Smed_v6_12752_0_1, [RH, Score=252, Expect=3e-72]} {RNA1509_8718} {RNA1310_5638.1} {RNA815_9138}

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