Data search
Results for MligTC455_21457
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_21457 | 71 | 1.49 | Mlig455_011701 | Neo: - Age: - |
Mlig455_011701 {REF} {Length: 416} {NoTransDecoderORF} {RNA1509_2806} |
Cumulative graph for MligTC455_21457
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 6.617 | 1.193 | 0.07698 | 0.61130 | |
| RegionR2 | -3.072 | 1.193 | 0.27935 | 0.66616 | |
| RegionR3 | -4.138 | 1.193 | 0.12706 | 0.61344 | |
| RegionR4 | 2.248 | 1.193 | 0.31637 | 0.63234 | |
| RegionR5 | -2.984 | 1.193 | 0.25226 | 0.56932 | |
| RegionR6 | -1.181 | 1.193 | 0.58030 | 1.00000 | |
| RegionR7 | 1.841 | 1.193 | 0.40645 | 1.00000 | |
| RegionR8 | 0.668 | 1.193 | 0.96341 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -8.065 | 1.193 | 0.25832 | 0.96822 | |
| RegenerationR2 | -0.348 | 1.193 | 0.84858 | 1.00000 | |
| RegenerationR3 | -0.131 | 1.193 | 0.98711 | 1.00000 | |
| RegenerationR4 | -1.721 | 1.193 | 0.46276 | 0.84878 | |
| RegenerationR5 | 0.825 | 1.193 | 0.78069 | 0.98198 | |
| RegenerationR6 | -2.489 | 1.193 | 0.40101 | 0.73806 | |
| RegenerationBL | -4.593 | 1.193 | 0.20805 | 0.55034 | |
| RegenerationTP | -3.092 | 1.193 | 0.31680 | 0.76155 |
Genes with expression patterns similar to MligTC455_21457
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_21457 | 71 | 1.49 | Mlig455_011701 | Neo: - Age: - |
3 | 1.000 | - | 1.000 | - | - | 1.000 | Mlig455_011701 {REF} {Length: 416} {NoTransDecoderORF} {RNA1509_2806} | |
| 2. | MligTC455_44194 | 195 | 4.07 | Mlig455_049839, Mlig455_049886 | Neo: - Age: - |
1.801 | 0.999 | - | 0.802 | - | - | - | Mlig455_049839 {REF} {Length: 415} {RNA1509_2806, RNA1509_699} Mlig455_049886 {REF} {Length: 378} {NoTransDecoderORF} {RNA1509_2806, RNA1509_798} |
|
| 3. | MligTC455_06328 | 144 | 3 | Mlig455_044820 | Neo: - Age: Down-Down-Up Region-enriched R8: 2.752/0.01310 Regeneration-downregulated BL: -7.394 Regeneration-depleted BL: -7.394 |
NOTCH4 | 0.974 | 0.974 | - | - | - | - | - | Mlig455_044820 {REF} {Length: 2669} {TRANSSPLICED} {Pfam: EGF-like domain [PF00008.29, score=37.2]; Human growth factor-like EGF [PF12661.9, score=29.7]; EGF-like domain [PF07974.15, score=19.8]} {Human: ENSG00000234876, NOTCH4, notch 4, [Score=105, Expect=1e-22]; ENSG00000204301, NOTCH4, notch 4, [Score=105, Expect=1e-22]; ENSG00000235396, NOTCH4, notch 4, [Score=105, Expect=1e-22]; ENSG00000223355, NOTCH4, notch 4, [Score=105, Expect=1e-22]; ENSG00000206312, NOTCH4, notch 4, [Score=105, Expect=1e-22]; ENSG00000232339, NOTCH4, notch 4, [Score=105, Expect=1e-22]; ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=104, Expect=3e-22]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [Score=92.4, Expect=1e-18]; ENSMUSG00000027878, Notch2, notch 2, [Score=90.1, Expect=6e-18]; ENSMUSG00000025020, Slit1, slit guidance ligand 1, [Score=89.7, Expect=7e-18]} {Dmel: FBgn0051665, wry, weary, [Score=115, Expect=3e-26]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=84.0, Expect=3e-16]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=107, Expect=1e-23]} {RNA1509_13430} {RNA1310_7596.1} {RNA815_13746} |
| 4. | MligTC455_38299 | 562 | 11.71 | Mlig455_057143 | Neo: - Age: Down-Up-Down Region-enriched R8: 3.394/0.00342 |
CDX2 | 0.967 | 0.967 | - | - | - | - | - | Mlig455_057143 {REF} {Length: 2892} {Pfam: Homeodomain [PF00046.31, score=62.0]} {Human: ENSG00000165556, CDX2, caudal type homeobox 2, [RH, Score=106, Expect=4e-25]; ENSG00000113722, CDX1, caudal type homeobox 1, [RH, Score=104, Expect=7e-25]} {Mouse: ENSMUSG00000024619, Cdx1, caudal type homeobox 1, [RH, Score=104, Expect=5e-25]} {Dmel: FBgn0000251, cad, caudal, [RH, Score=103, Expect=8e-24]} {Celegans: WBGene00003912, pal-1, Homeobox protein pal-1, [RH, Score=99.4, Expect=2e-23]} {Smed: dd_Smed_v6_2442_0_1, dd_Smed_v6_2442_0_1, [Score=71.6, Expect=2e-14]} {RNA1509_20207} {RNA1310_9296.1, RNA1509_20207} {RNA1509_20207, RNA815_10543} |
| 5. | MligTC455_20097 | 1223 | 25.49 | Mlig455_023539, Mlig455_023644 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.339 Region-enriched R8: 3.355/0.00001 Regeneration-upregulated BL: 2.571 Regeneration-enriched BL: 2.571 |
0.95 | 0.950 | - | - | - | - | - | Mlig455_023539 {REF} {Length: 2548} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=20.7]} {RNA1509_20731} {RNA1310_7206} {RNA815_15099} Mlig455_023644 {REF} {Length: 2780} {Pfam: C2H2-type zinc finger [PF13894.8, score=20.7]} {RNA1509_20731} {RNA1310_7206, RNA1509_20731} {RNA1509_20731, RNA815_15099} |
Berezikov Lab - 2020-2021 © ERIBA