TomoSeq data search

Data search

Results for MligTC455_21476

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_21476	726	15.12	Mlig455_019236, Mlig455_035566	Neo: - Age: logFC(26M/2M)=-0.433	SLC6A5, SLC6A9	Mlig455_019236 {REF} {Length: 3910} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=631.9]} {Human: ENSG00000196517, SLC6A9, solute carrier family 6 member 9, [RH, Score=513, Expect=4e-172]} {Mouse: ENSMUSG00000028542, Slc6a9, solute carrier family 6 (neurotransmitter transporter, glycine), member 9, [RH, Score=513, Expect=3e-173]} {Dmel: FBgn0034911, CG5549, [Score=486, Expect=3e-156]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=412, Expect=2e-134]} {Smed: dd_Smed_v6_5713_0_2, dd_Smed_v6_5713_0_2, [RH, Score=674, Expect=0.0]} {RNA1509_17386, RNA1509_4422, RNA1509_52580} {RNA1310_5588, RNA1509_17386, RNA1509_4422, RNA1509_52580} {RNA1509_17386, RNA1509_4422, RNA1509_52580, RNA815_1736.1} Mlig455_035566 {REF} {Length: 3334} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=455.2]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=389, Expect=2e-125]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=392, Expect=2e-126]} {Dmel: FBgn0034911, CG5549, [Score=339, Expect=2e-103]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=283, Expect=3e-87]} {Smed: dd_Smed_v6_5713_0_1, dd_Smed_v6_5713_0_1, [Score=517, Expect=5e-178]} {RNA1509_4422, RNA1509_48374} {RNA1310_5588, RNA1509_48374} {RNA1509_48374, RNA815_8455}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_21476

726

15.12

Mlig455_019236, Mlig455_035566

Neo: -

Age: logFC(26M/2M)=-0.433

SLC6A5, SLC6A9

Mlig455_019236 {REF} {Length: 3910} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=631.9]} {Human: ENSG00000196517, SLC6A9, solute carrier family 6 member 9, [RH, Score=513, Expect=4e-172]} {Mouse: ENSMUSG00000028542, Slc6a9, solute carrier family 6 (neurotransmitter transporter, glycine), member 9, [RH, Score=513, Expect=3e-173]} {Dmel: FBgn0034911, CG5549, [Score=486, Expect=3e-156]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=412, Expect=2e-134]} {Smed: dd_Smed_v6_5713_0_2, dd_Smed_v6_5713_0_2, [RH, Score=674, Expect=0.0]} {RNA1509_17386, RNA1509_4422, RNA1509_52580} {RNA1310_5588, RNA1509_17386, RNA1509_4422, RNA1509_52580} {RNA1509_17386, RNA1509_4422, RNA1509_52580, RNA815_1736.1}

Mlig455_035566 {REF} {Length: 3334} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=455.2]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=389, Expect=2e-125]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=392, Expect=2e-126]} {Dmel: FBgn0034911, CG5549, [Score=339, Expect=2e-103]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=283, Expect=3e-87]} {Smed: dd_Smed_v6_5713_0_1, dd_Smed_v6_5713_0_1, [Score=517, Expect=5e-178]} {RNA1509_4422, RNA1509_48374} {RNA1310_5588, RNA1509_48374} {RNA1509_48374, RNA815_8455}

Cumulative graph for MligTC455_21476

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.878	4.242	0.55626	1.00000
RegionR2	-0.27	4.242	0.66063	0.99262
RegionR3	-0.173	4.242	0.74757	1.00000
RegionR4	1.739	4.242	0.00940	0.05827
RegionR5	0.445	4.242	0.37120	0.72412
RegionR6	0.779	4.242	0.11648	0.62252
RegionR7	-1.067	4.242	0.12643	0.67007
RegionR8	-0.574	4.242	0.45559	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.989	4.242	0.24700	0.96633
RegenerationR2	-0.366	4.242	0.50685	0.87419
RegenerationR3	-0.298	4.242	0.62093	0.91710
RegenerationR4	-0.113	4.242	0.85838	1.00000
RegenerationR5	0.164	4.242	0.77836	0.98132
RegenerationR6	0.286	4.242	0.62196	0.88193
RegenerationBL	0.382	4.242	0.53746	0.89683
RegenerationTP	0.846	4.242	0.22207	0.66550

Genes with expression patterns similar to MligTC455_21476

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_21476	726	15.12	Mlig455_019236, Mlig455_035566	Neo: - Age: logFC(26M/2M)=-0.433	SLC6A5, SLC6A9	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_019236 {REF} {Length: 3910} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=631.9]} {Human: ENSG00000196517, SLC6A9, solute carrier family 6 member 9, [RH, Score=513, Expect=4e-172]} {Mouse: ENSMUSG00000028542, Slc6a9, solute carrier family 6 (neurotransmitter transporter, glycine), member 9, [RH, Score=513, Expect=3e-173]} {Dmel: FBgn0034911, CG5549, [Score=486, Expect=3e-156]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=412, Expect=2e-134]} {Smed: dd_Smed_v6_5713_0_2, dd_Smed_v6_5713_0_2, [RH, Score=674, Expect=0.0]} {RNA1509_17386, RNA1509_4422, RNA1509_52580} {RNA1310_5588, RNA1509_17386, RNA1509_4422, RNA1509_52580} {RNA1509_17386, RNA1509_4422, RNA1509_52580, RNA815_1736.1} Mlig455_035566 {REF} {Length: 3334} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=455.2]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=389, Expect=2e-125]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=392, Expect=2e-126]} {Dmel: FBgn0034911, CG5549, [Score=339, Expect=2e-103]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=283, Expect=3e-87]} {Smed: dd_Smed_v6_5713_0_1, dd_Smed_v6_5713_0_1, [Score=517, Expect=5e-178]} {RNA1509_4422, RNA1509_48374} {RNA1310_5588, RNA1509_48374} {RNA1509_48374, RNA815_8455}
2.	MligTC455_25860	1063	22.16	Mlig455_005876	Neo: - Age: - Region-enriched R6: 2.187/0.00132	GLIPR2	0.965	-	-	-	-	0.965	-	Mlig455_005876 {REF} {Length: 1599} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=84.1]} {Human: ENSG00000122694, GLIPR2, GLI pathogenesis related 2, [Score=106, Expect=1e-26]} {Mouse: ENSMUSG00000028480, Glipr2, GLI pathogenesis-related 2, [Score=108, Expect=8e-28]} {Dmel: FBgn0051482, CG31482, [RH, Score=101, Expect=1e-24]} {Celegans: WBGene00017055, D2062.1, [Score=73.6, Expect=6e-15]} {Smed: dd_Smed_v6_762_0_2, dd_Smed_v6_762_0_2, [RH, Score=147, Expect=5e-41]} {RNA1509_5334} {RNA1310_33115} {RNA815_15217.1}
3.	MligTC455_38494	435	9.07	Mlig455_052491	Neo: - Age: -	SHANK3	0.96	-	-	-	-	-	0.960	Mlig455_052491 {REF} {Length: 6999} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=72.9]; Ankyrin repeats (3 copies) [PF12796.9, score=66.4]; Ankyrin repeats (many copies) [PF13857.8, score=61.6]; PDZ domain [PF17820.3, score=45.6]; PDZ domain [PF00595.26, score=42.0]; Ankyrin repeat [PF00023.32, score=41.6]; Ankyrin repeat [PF13606.8, score=38.1]; PDZ domain [PF13180.8, score=22.8]} {Human: ENSG00000251322, SHANK3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=351, Expect=4e-98]; ENSG00000283243, SHANK3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=351, Expect=4e-98]} {Mouse: ENSMUSG00000022623, Shank3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=348, Expect=3e-97]} {Dmel: FBgn0040752, Prosap, [RH, Score=376, Expect=2e-106]} {Celegans: WBGene00006444, shn-1, SHaNk (SH3/ankyrin domain scaffold protein) related, [RH, Score=313, Expect=7e-89]} {Smed: dd_Smed_v6_7862_0_1, dd_Smed_v6_7862_0_1, [RH, Score=395, Expect=2e-117]} {RNA1509_11762, RNA1509_43983} {RNA1310_4641.1, RNA1509_11762} {RNA1509_11762, RNA815_176.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_21476

726

15.12

Mlig455_019236, Mlig455_035566

Neo: -

Age: logFC(26M/2M)=-0.433

SLC6A5, SLC6A9

1.000

MligTC455_25860

1063

22.16

Mlig455_005876

Neo: -

Age: -

Region-enriched R6: 2.187/0.00132

GLIPR2

0.965

Mlig455_005876 {REF} {Length: 1599} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=84.1]} {Human: ENSG00000122694, GLIPR2, GLI pathogenesis related 2, [Score=106, Expect=1e-26]} {Mouse: ENSMUSG00000028480, Glipr2, GLI pathogenesis-related 2, [Score=108, Expect=8e-28]} {Dmel: FBgn0051482, CG31482, [RH, Score=101, Expect=1e-24]} {Celegans: WBGene00017055, D2062.1, [Score=73.6, Expect=6e-15]} {Smed: dd_Smed_v6_762_0_2, dd_Smed_v6_762_0_2, [RH, Score=147, Expect=5e-41]} {RNA1509_5334} {RNA1310_33115} {RNA815_15217.1}

MligTC455_38494

435

9.07

Mlig455_052491

Neo: -

Age: -

SHANK3

0.96

0.960

Mlig455_052491 {REF} {Length: 6999} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=72.9]; Ankyrin repeats (3 copies) [PF12796.9, score=66.4]; Ankyrin repeats (many copies) [PF13857.8, score=61.6]; PDZ domain [PF17820.3, score=45.6]; PDZ domain [PF00595.26, score=42.0]; Ankyrin repeat [PF00023.32, score=41.6]; Ankyrin repeat [PF13606.8, score=38.1]; PDZ domain [PF13180.8, score=22.8]} {Human: ENSG00000251322, SHANK3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=351, Expect=4e-98]; ENSG00000283243, SHANK3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=351, Expect=4e-98]} {Mouse: ENSMUSG00000022623, Shank3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=348, Expect=3e-97]} {Dmel: FBgn0040752, Prosap, [RH, Score=376, Expect=2e-106]} {Celegans: WBGene00006444, shn-1, SHaNk (SH3/ankyrin domain scaffold protein) related, [RH, Score=313, Expect=7e-89]} {Smed: dd_Smed_v6_7862_0_1, dd_Smed_v6_7862_0_1, [RH, Score=395, Expect=2e-117]} {RNA1509_11762, RNA1509_43983} {RNA1310_4641.1, RNA1509_11762} {RNA1509_11762, RNA815_176.1}