Data search
Results for MligTC455_21496
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_21496 | 100 | 2.08 | Mlig455_030119 | Neo: - Age: Up-Down-Down |
Mlig455_030119 {REF} {Length: 5687} {RNA1509_26753, RNA1509_38585} {RNA1310_2011, RNA1509_26753} {RNA1509_26753, RNA815_4039} |
Cumulative graph for MligTC455_21496
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.5 | 1.927 | 0.37836 | 1.00000 | |
| RegionR2 | 0.019 | 1.927 | 0.85874 | 1.00000 | |
| RegionR3 | -0.355 | 1.927 | 0.94630 | 1.00000 | |
| RegionR4 | 1.443 | 1.927 | 0.16787 | 0.42989 | |
| RegionR5 | 1.29 | 1.927 | 0.17494 | 0.44765 | |
| RegionR6 | 0.674 | 1.927 | 0.55327 | 1.00000 | |
| RegionR7 | -0.692 | 1.927 | 0.97734 | 1.00000 | |
| RegionR8 | 2.12 | 1.927 | 0.15304 | 0.70911 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.567 | 1.927 | 0.99993 | 1.00000 | |
| RegenerationR2 | 0.871 | 1.927 | 0.20089 | 0.64726 | |
| RegenerationR3 | 0.986 | 1.927 | 0.27540 | 0.70953 | |
| RegenerationR4 | -0.111 | 1.927 | 0.86758 | 1.00000 | |
| RegenerationR5 | 0.027 | 1.927 | 0.98274 | 1.00000 | |
| RegenerationR6 | 1.087 | 1.927 | 0.17635 | 0.50966 | |
| RegenerationBL | -1.515 | 1.927 | 0.30658 | 0.67122 | |
| RegenerationTP | -0.728 | 1.927 | 0.63512 | 0.98098 |
Genes with expression patterns similar to MligTC455_21496
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_21496 | 100 | 2.08 | Mlig455_030119 | Neo: - Age: Up-Down-Down |
5 | 1.000 | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_030119 {REF} {Length: 5687} {RNA1509_26753, RNA1509_38585} {RNA1310_2011, RNA1509_26753} {RNA1509_26753, RNA815_4039} | |
| 2. | MligTC455_26131 | 63 | 1.32 | Mlig455_009663 | Neo: - Age: - |
0.982 | - | - | 0.982 | - | - | - | Mlig455_009663 {REF} {Length: 2874} {RNA1509_46710} {RNA1310_18270} {RNA815_22851} | |
| 3. | MligTC455_51303 | 288 | 5.99 | Mlig455_027424 | Neo: - Age: Down-Up-Down |
TIMM22 | 0.978 | - | - | - | - | 0.978 | - | Mlig455_027424 {REF} {Length: 1820} {TRANSSPLICED} {Pfam: Tim17/Tim22/Tim23/Pmp24 family [PF02466.21, score=94.4]} {Human: ENSG00000177370, TIMM22, translocase of inner mitochondrial membrane 22, [RH, Score=143, Expect=9e-43]; ENSG00000278501, TIMM22, translocase of inner mitochondrial membrane 22, [RH, Score=143, Expect=9e-43]; ENSG00000277649, TIMM22, translocase of inner mitochondrial membrane 22, [RH, Score=143, Expect=9e-43]} {Mouse: ENSMUSG00000020843, Timm22, translocase of inner mitochondrial membrane 22, [RH, Score=144, Expect=3e-43]} {Dmel: FBgn0051229, CG31229, [RH, Score=115, Expect=3e-32]} {Celegans: WBGene00008164, C47G2.3, Mitochondrial import inner membrane translocase subunit tim-22, [RH, Score=133, Expect=7e-39]} {Smed: dd_Smed_v6_9333_0_1, dd_Smed_v6_9333_0_1, [RH, Score=177, Expect=3e-56]} {RNA1509_23050} {RNA1310_46537} {RNA815_22653} |
| 4. | MligTC455_52372 | 288 | 5.99 | Mlig455_012761 | Neo: - Age: logFC(26M/2M)=-0.342 |
CEP89 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_012761 {REF} {Length: 3139} {Pfam: Uncharacterised protein family (UPF0242) N-terminus [PF06785.13, score=23.6]} {Human: ENSG00000121289, CEP89, centrosomal protein 89, [RH, Score=113, Expect=1e-25]} {Mouse: ENSMUSG00000023072, Cep89, centrosomal protein 89, [RH, Score=106, Expect=2e-23]} {Smed: dd_Smed_v6_13073_0_1, dd_Smed_v6_13073_0_1, [RH, Score=80.5, Expect=1e-15]} {RNA1509_10380} {RNA1310_5262.1} {RNA815_3458.1} |
| 5. | MligTC455_19346 | 71 | 1.47 | Mlig455_013129 | Neo: - Age: - |
TRPM3 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_013129 {REF} {Length: 4651} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=76.7]; Ankyrin repeats (many copies) [PF13637.8, score=49.6]; Ankyrin repeat [PF13606.8, score=46.4]; Ankyrin repeats (many copies) [PF13857.8, score=37.4]; Ankyrin repeat [PF00023.32, score=31.6]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=87.8, Expect=1e-16]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=85.1, Expect=8e-16]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=85.1, Expect=8e-16]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=87.4, Expect=1e-16]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=85.9, Expect=3e-16]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=86.3, Expect=2e-16]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=55.8, Expect=3e-07]} {Smed: dd_Smed_v6_10717_0_1, dd_Smed_v6_10717_0_1, [Score=104, Expect=2e-22]} {RNA1509_47152} {RNA1310_3124} {RNA815_446.1} |
| 6. | MligTC455_26422 | 558 | 11.63 | Mlig455_006604 | Neo: - Age: Up-Down-Down |
RAPGEF6 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_006604 {REF} {Length: 5327} {TRANSSPLICED} {Pfam: RasGEF domain [PF00617.21, score=127.5]; PDZ domain [PF17820.3, score=36.1]; RasGEF N-terminal motif [PF00618.22, score=30.2]; PDZ domain [PF00595.26, score=30.0]; Cyclic nucleotide-binding domain [PF00027.31, score=25.6]; Ras association (RalGDS/AF-6) domain [PF00788.25, score=24.0]; PDZ domain [PF13180.8, score=22.9]} {Human: ENSG00000158987, RAPGEF6, Rap guanine nucleotide exchange factor 6, [RH, Score=477, Expect=3e-145]; ENSG00000273217, AC008695.1, novel protein, [RH, Score=474, Expect=2e-142]; ENSG00000109756, RAPGEF2, Rap guanine nucleotide exchange factor 2, [RH, Score=474, Expect=2e-143]} {Mouse: ENSMUSG00000037533, Rapgef6, Rap guanine nucleotide exchange factor (GEF) 6, [RH, Score=478, Expect=4e-144]; ENSMUSG00000062232, Rapgef2, Rap guanine nucleotide exchange factor (GEF) 2, [RH, Score=474, Expect=9e-144]} {Dmel: FBgn0265778, PDZ-GEF, PDZ domain-containing guanine nucleotide exchange factor, [RH, Score=261, Expect=1e-70]} {Celegans: WBGene00004254, pxf-1, Rap guanine nucleotide exchange factor, [RH, Score=221, Expect=4e-58]} {Smed: dd_Smed_v6_4950_0_3, dd_Smed_v6_4950_0_3, [RH, Score=436, Expect=9e-130]} {RNA1509_33540} {RNA1310_804.1, RNA1509_33540} {RNA1509_33540, RNA815_1044} |
| 7. | MligTC455_33044 | 734 | 15.3 | Mlig455_037188, Mlig455_052339 | Neo: - Age: logFC(26M/2M)=-0.337 |
RPGRIP1L | 0.955 | - | - | - | - | - | 0.955 | Mlig455_037188 {REF} {Length: 4884} {TRANSSPLICED} {Pfam: First C2 domain of RPGR-interacting protein 1 [PF11618.10, score=146.0]; Retinitis pigmentosa G-protein regulator interacting C-terminal [PF18111.3, score=71.1]; C2 domain [PF00168.32, score=28.5]} {Human: ENSG00000103494, RPGRIP1L, RPGRIP1 like, [Score=369, Expect=5e-110]} {Mouse: ENSMUSG00000033282, Rpgrip1l, Rpgrip1-like, [Score=355, Expect=2e-105]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [Score=337, Expect=1e-98]} {RNA1509_2695} {RNA1310_1383} {RNA815_371} Mlig455_052339 {REF} {Length: 4951} {TRANSSPLICED} {Pfam: First C2 domain of RPGR-interacting protein 1 [PF11618.10, score=149.3]; Retinitis pigmentosa G-protein regulator interacting C-terminal [PF18111.3, score=70.2]; C2 domain [PF00168.32, score=27.9]} {Human: ENSG00000103494, RPGRIP1L, RPGRIP1 like, [RH, Score=514, Expect=3e-159]} {Mouse: ENSMUSG00000033282, Rpgrip1l, Rpgrip1-like, [RH, Score=499, Expect=7e-154]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [RH, Score=511, Expect=5e-158]} {RNA1509_2695, RNA1509_47268} {RNA1310_1383, RNA1509_2695, RNA1509_47268} {RNA1509_2695, RNA1509_47268, RNA815_371} |
| 8. | MligTC455_23545 | 337 | 7.02 | Mlig455_021926 | Neo: - Age: - |
MAP3K19 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_021926 {REF} {Length: 5795} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=189.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=145.7]; Ankyrin repeats (3 copies) [PF12796.9, score=111.3]; Ankyrin repeats (many copies) [PF13637.8, score=88.9]; Ankyrin repeats (many copies) [PF13857.8, score=82.7]; Ankyrin repeat [PF00023.32, score=61.1]; Ankyrin repeat [PF13606.8, score=59.7]; ABC1 atypical kinase-like domain [PF03109.18, score=31.6]; Fungal protein kinase [PF17667.3, score=17.8]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=165, Expect=3e-43]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=169, Expect=3e-43]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=145, Expect=4e-36]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=136, Expect=2e-33]} {Smed: dd_Smed_v6_10339_0_1, dd_Smed_v6_10339_0_1, [Score=154, Expect=1e-38]} {RNA1509_9426} {RNA1310_9191} {RNA815_12161} |
| 9. | MligTC455_41248 | 1046 | 21.8 | Mlig455_044640 | Neo: - Age: logFC(26M/2M)=-0.313 |
0.954 | - | - | - | - | - | 0.954 | Mlig455_044640 {REF} {Length: 2461} {Smed: dd_Smed_v6_13819_0_1, dd_Smed_v6_13819_0_1, [RH, Score=81.6, Expect=3e-16]} {RNA1509_8335} {RNA1310_4833.1, RNA1509_8335} {RNA1509_8335, RNA815_1430.1} | |
| 10. | MligTC455_44463 | 494 | 10.29 | Mlig455_051981 | Neo: - Age: - |
NPHP1 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_051981 {REF} {Length: 3299} {Pfam: SH3 domain [PF00018.30, score=39.9]; Variant SH3 domain [PF14604.8, score=34.6]; Variant SH3 domain [PF07653.19, score=26.3]} {Human: ENSG00000144061, NPHP1, nephrocystin 1, [RH, Score=219, Expect=1e-60]} {Mouse: ENSMUSG00000027378, Nphp1, nephronophthisis 1 (juvenile) homolog (human), [RH, Score=207, Expect=9e-57]} {Dmel: FBgn0263456, nwk, nervous wreck, [RH, Score=58.5, Expect=2e-08]} {Celegans: WBGene00010898, nphp-1, Nephrocystin-1-like protein, [Score=99.4, Expect=3e-21]} {Smed: dd_Smed_v6_9990_0_1, dd_Smed_v6_9990_0_1, [RH, Score=238, Expect=3e-66]} {RNA1509_32961, RNA1509_37905} {RNA1310_9260.1, RNA1509_37905} {RNA1509_37905, RNA815_7363} |
| 11. | MligTC455_20735 | 524 | 10.92 | Mlig455_001230, Mlig455_034590 | Neo: - Age: Up-Down-Down |
DNAH17 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_001230 {REF} {Length: 15133} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=492.0]; Microtubule-binding stalk of dynein motor [PF12777.9, score=453.0]; Dynein heavy chain, N-terminal region 1 [PF08385.14, score=451.9]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=392.2]; Dynein heavy chain C-terminal domain [PF18199.3, score=310.3]; P-loop containing dynein motor region D4 [PF12780.9, score=304.2]; ATP-binding dynein motor region [PF12781.9, score=281.8]; P-loop containing dynein motor region [PF12775.9, score=247.8]; Dynein heavy chain AAA lid domain [PF18198.3, score=173.9]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=137.0]; AAA+ lid domain [PF17857.3, score=124.8]; AAA domain (dynein-related subfamily) [PF07728.16, score=88.2]; Dynein heavy chain AAA lid domain [PF17852.3, score=86.3]; AAA domain [PF13401.8, score=32.9]; Sigma-54 interaction domain [PF00158.28, score=29.0]; AAA domain [PF13604.8, score=26.1]; AAA domain [PF13238.8, score=24.4]; AAA ATPase domain [PF13191.8, score=22.9]; Spectrin repeat [PF00435.23, score=19.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=19.0]} {Human: ENSG00000187775, DNAH17, dynein axonemal heavy chain 17, [Score=5109, Expect=0.0]; ENSG00000007174, DNAH9, dynein axonemal heavy chain 9, [Score=5036, Expect=0.0]} {Mouse: ENSMUSG00000033987, Dnah17, dynein, axonemal, heavy chain 17, [Score=5137, Expect=0.0]; ENSMUSG00000056752, Dnah9, dynein, axonemal, heavy chain 9, [Score=5062, Expect=0.0]} {Dmel: FBgn0013812, Dhc93AB, Dynein heavy chain at 93AB, [Score=4904, Expect=0.0]} {Celegans: WBGene00000485, che-3, Cytoplasmic dynein 2 heavy chain 1, [Score=1042, Expect=0.0]} {Smed: dd_Smed_v6_3670_0_1, dd_Smed_v6_3670_0_1, [Score=5484, Expect=0.0]} {RNA1509_1474} {RNA1310_44.1, RNA1509_1474} {RNA1509_1474, RNA815_35} Mlig455_034590 {REF} {Length: 15079} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=492.0]; Microtubule-binding stalk of dynein motor [PF12777.9, score=454.2]; Dynein heavy chain, N-terminal region 1 [PF08385.14, score=451.2]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=392.2]; Dynein heavy chain C-terminal domain [PF18199.3, score=310.2]; P-loop containing dynein motor region D4 [PF12780.9, score=304.8]; ATP-binding dynein motor region [PF12781.9, score=281.1]; P-loop containing dynein motor region [PF12775.9, score=247.8]; Dynein heavy chain AAA lid domain [PF18198.3, score=173.9]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=137.1]; AAA+ lid domain [PF17857.3, score=124.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=88.5]; Dynein heavy chain AAA lid domain [PF17852.3, score=86.4]; AAA domain [PF13401.8, score=32.8]; Sigma-54 interaction domain [PF00158.28, score=29.0]; AAA domain [PF13604.8, score=26.2]; AAA domain [PF13238.8, score=25.8]; AAA ATPase domain [PF13191.8, score=22.7]; Spectrin repeat [PF00435.23, score=19.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=19.0]} {Human: ENSG00000187775, DNAH17, dynein axonemal heavy chain 17, [Score=5106, Expect=0.0]; ENSG00000007174, DNAH9, dynein axonemal heavy chain 9, [Score=5032, Expect=0.0]} {Mouse: ENSMUSG00000033987, Dnah17, dynein, axonemal, heavy chain 17, [Score=5136, Expect=0.0]; ENSMUSG00000056752, Dnah9, dynein, axonemal, heavy chain 9, [Score=5061, Expect=0.0]} {Dmel: FBgn0013812, Dhc93AB, Dynein heavy chain at 93AB, [Score=4905, Expect=0.0]} {Celegans: WBGene00000485, che-3, Cytoplasmic dynein 2 heavy chain 1, [Score=1040, Expect=0.0]} {Smed: dd_Smed_v6_3670_0_1, dd_Smed_v6_3670_0_1, [Score=5483, Expect=0.0]} {RNA1509_1474} {RNA1310_44.1} {RNA815_35} |
| 12. | MligTC455_27057 | 154 | 3.21 | Mlig455_014579 | Neo: - Age: - |
0.951 | - | - | - | - | - | 0.951 | Mlig455_014579 {REF} {Length: 4137} {TRANSSPLICED} {RNA1509_33062} {RNA1310_8891.1} {RNA815_1626.1} | |
| 13. | MligTC455_49826 | 25 | 0.52 | Mlig455_019655, Mlig455_048057 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_019655 {REF} {Length: 723} {NoTransDecoderORF} {RNA1310_134460} Mlig455_048057 {REF} {Length: 437} {NoTransDecoderORF} {RNA1310_134460} |
|
| 14. | MligTC455_19466 | 542 | 11.28 | Mlig455_007916, Mlig455_008023 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_007916 {REF} {Length: 1335} {RNA1509_32168} {RNA1310_48781} {RNA815_25983} Mlig455_008023 {REF} {Length: 1864} {RNA1509_32168} {RNA1310_48781} {RNA815_25983} |