TomoSeq data search

Data search

Results for MligTC455_21527

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_21527	366	7.63	Mlig455_015345, Mlig455_068780	Neo: - Age: Up-Down-Up	ASCC3	Mlig455_015345 {REF} {Length: 8006} {Pfam: Sec63 Brl domain [PF02889.18, score=439.8]; DEAD/DEAH box helicase [PF00270.31, score=178.0]; Type III restriction enzyme, res subunit [PF04851.17, score=80.6]; Helicase conserved C-terminal domain [PF00271.33, score=48.8]; AAA domain [PF13401.8, score=31.0]; AAA domain [PF13604.8, score=30.3]; AAA domain [PF13245.8, score=22.8]} {Human: ENSG00000112249, ASCC3, activating signal cointegrator 1 complex subunit 3, [RH, Score=2183, Expect=0.0]} {Mouse: ENSMUSG00000038774, Ascc3, activating signal cointegrator 1 complex subunit 3, [RH, Score=2184, Expect=0.0]} {Dmel: FBgn0038344, obe, obelus, [RH, Score=1929, Expect=0.0]} {Celegans: WBGene00013189, Y54E2A.4, [RH, Score=1678, Expect=0.0]} {Smed: dd_Smed_v6_11140_0_1, dd_Smed_v6_11140_0_1, [RH, Score=1923, Expect=0.0]} {RNA1509_2241} {RNA1310_438} {RNA815_146.1} Mlig455_068780 {REF} {Length: 8004} {Pfam: Sec63 Brl domain [PF02889.18, score=440.8]; DEAD/DEAH box helicase [PF00270.31, score=149.3]; Type III restriction enzyme, res subunit [PF04851.17, score=64.1]; Helicase conserved C-terminal domain [PF00271.33, score=48.6]; AAA domain [PF13401.8, score=30.8]; AAA domain [PF13604.8, score=27.3]; AAA domain [PF13245.8, score=20.1]} {Human: ENSG00000112249, ASCC3, activating signal cointegrator 1 complex subunit 3, [RH, Score=2126, Expect=0.0]} {Mouse: ENSMUSG00000038774, Ascc3, activating signal cointegrator 1 complex subunit 3, [RH, Score=2130, Expect=0.0]} {Dmel: FBgn0038344, obe, obelus, [RH, Score=1873, Expect=0.0]} {Celegans: WBGene00013189, Y54E2A.4, [RH, Score=1628, Expect=0.0]} {Smed: dd_Smed_v6_11140_0_1, dd_Smed_v6_11140_0_1, [RH, Score=1870, Expect=0.0]} {RNA1509_2241} {RNA1310_438} {RNA815_146.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_21527

366

7.63

Mlig455_015345, Mlig455_068780

Neo: -

Age: Up-Down-Up

ASCC3

Mlig455_015345 {REF} {Length: 8006} {Pfam: Sec63 Brl domain [PF02889.18, score=439.8]; DEAD/DEAH box helicase [PF00270.31, score=178.0]; Type III restriction enzyme, res subunit [PF04851.17, score=80.6]; Helicase conserved C-terminal domain [PF00271.33, score=48.8]; AAA domain [PF13401.8, score=31.0]; AAA domain [PF13604.8, score=30.3]; AAA domain [PF13245.8, score=22.8]} {Human: ENSG00000112249, ASCC3, activating signal cointegrator 1 complex subunit 3, [RH, Score=2183, Expect=0.0]} {Mouse: ENSMUSG00000038774, Ascc3, activating signal cointegrator 1 complex subunit 3, [RH, Score=2184, Expect=0.0]} {Dmel: FBgn0038344, obe, obelus, [RH, Score=1929, Expect=0.0]} {Celegans: WBGene00013189, Y54E2A.4, [RH, Score=1678, Expect=0.0]} {Smed: dd_Smed_v6_11140_0_1, dd_Smed_v6_11140_0_1, [RH, Score=1923, Expect=0.0]} {RNA1509_2241} {RNA1310_438} {RNA815_146.1}

Mlig455_068780 {REF} {Length: 8004} {Pfam: Sec63 Brl domain [PF02889.18, score=440.8]; DEAD/DEAH box helicase [PF00270.31, score=149.3]; Type III restriction enzyme, res subunit [PF04851.17, score=64.1]; Helicase conserved C-terminal domain [PF00271.33, score=48.6]; AAA domain [PF13401.8, score=30.8]; AAA domain [PF13604.8, score=27.3]; AAA domain [PF13245.8, score=20.1]} {Human: ENSG00000112249, ASCC3, activating signal cointegrator 1 complex subunit 3, [RH, Score=2126, Expect=0.0]} {Mouse: ENSMUSG00000038774, Ascc3, activating signal cointegrator 1 complex subunit 3, [RH, Score=2130, Expect=0.0]} {Dmel: FBgn0038344, obe, obelus, [RH, Score=1873, Expect=0.0]} {Celegans: WBGene00013189, Y54E2A.4, [RH, Score=1628, Expect=0.0]} {Smed: dd_Smed_v6_11140_0_1, dd_Smed_v6_11140_0_1, [RH, Score=1870, Expect=0.0]} {RNA1509_2241} {RNA1310_438} {RNA815_146.1}

Cumulative graph for MligTC455_21527

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.586	3.524	0.30614	0.95509
RegionR2	0.687	3.524	0.30852	0.69929
RegionR3	0.1	3.524	0.84493	1.00000
RegionR4	-0.067	3.524	0.92585	1.00000
RegionR5	0.314	3.524	0.47159	0.83437
RegionR6	-0.791	3.524	0.14495	0.68051
RegionR7	-0.125	3.524	0.85759	1.00000
RegionR8	1.468	3.524	0.03177	0.34869

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-3.168	3.524	0.61408	1.00000
RegenerationR2	0.892	3.524	0.09492	0.48961
RegenerationR3	0.048	3.524	0.93383	1.00000
RegenerationR4	0.125	3.524	0.84059	1.00000
RegenerationR5	-0.347	3.524	0.53255	0.87604
RegenerationR6	1.482	3.524	0.01940	0.17194
RegenerationBL	-5.261	3.524	0.01425	0.12457
RegenerationTP	-1.601	3.524	0.09251	0.47795

Genes with expression patterns similar to MligTC455_21527

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_21527	366	7.63	Mlig455_015345, Mlig455_068780	Neo: - Age: Up-Down-Up	ASCC3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_015345 {REF} {Length: 8006} {Pfam: Sec63 Brl domain [PF02889.18, score=439.8]; DEAD/DEAH box helicase [PF00270.31, score=178.0]; Type III restriction enzyme, res subunit [PF04851.17, score=80.6]; Helicase conserved C-terminal domain [PF00271.33, score=48.8]; AAA domain [PF13401.8, score=31.0]; AAA domain [PF13604.8, score=30.3]; AAA domain [PF13245.8, score=22.8]} {Human: ENSG00000112249, ASCC3, activating signal cointegrator 1 complex subunit 3, [RH, Score=2183, Expect=0.0]} {Mouse: ENSMUSG00000038774, Ascc3, activating signal cointegrator 1 complex subunit 3, [RH, Score=2184, Expect=0.0]} {Dmel: FBgn0038344, obe, obelus, [RH, Score=1929, Expect=0.0]} {Celegans: WBGene00013189, Y54E2A.4, [RH, Score=1678, Expect=0.0]} {Smed: dd_Smed_v6_11140_0_1, dd_Smed_v6_11140_0_1, [RH, Score=1923, Expect=0.0]} {RNA1509_2241} {RNA1310_438} {RNA815_146.1} Mlig455_068780 {REF} {Length: 8004} {Pfam: Sec63 Brl domain [PF02889.18, score=440.8]; DEAD/DEAH box helicase [PF00270.31, score=149.3]; Type III restriction enzyme, res subunit [PF04851.17, score=64.1]; Helicase conserved C-terminal domain [PF00271.33, score=48.6]; AAA domain [PF13401.8, score=30.8]; AAA domain [PF13604.8, score=27.3]; AAA domain [PF13245.8, score=20.1]} {Human: ENSG00000112249, ASCC3, activating signal cointegrator 1 complex subunit 3, [RH, Score=2126, Expect=0.0]} {Mouse: ENSMUSG00000038774, Ascc3, activating signal cointegrator 1 complex subunit 3, [RH, Score=2130, Expect=0.0]} {Dmel: FBgn0038344, obe, obelus, [RH, Score=1873, Expect=0.0]} {Celegans: WBGene00013189, Y54E2A.4, [RH, Score=1628, Expect=0.0]} {Smed: dd_Smed_v6_11140_0_1, dd_Smed_v6_11140_0_1, [RH, Score=1870, Expect=0.0]} {RNA1509_2241} {RNA1310_438} {RNA815_146.1}
2.	MligTC455_29943	60	1.26	Mlig455_039188	Neo: - Age: logFC(26M/2M)=-0.307	DHX58	1.771	-	-	-	0.812	-	0.959	Mlig455_039188 {REF} {Length: 4217} {Pfam: Type III restriction enzyme, res subunit [PF04851.17, score=72.5]; Helicase conserved C-terminal domain [PF00271.33, score=60.7]; DEAD/DEAH box helicase [PF00270.31, score=51.1]; C-terminal domain of RIG-I [PF11648.10, score=36.7]; SWI2/SNF2 ATPase [PF18766.3, score=30.8]; Terminase large subunit, T4likevirus-type, N-terminal [PF03237.17, score=19.0]} {Human: ENSG00000108771, DHX58, DExH-box helicase 58, [RH, Score=252, Expect=3e-71]; ENSG00000115267, IFIH1, interferon induced with helicase C domain 1, [RH, Score=248, Expect=1e-67]} {Mouse: ENSMUSG00000017830, Dhx58, DEXH (Asp-Glu-X-His) box polypeptide 58, [RH, Score=247, Expect=1e-69]} {Dmel: FBgn0038889, Fancm, Fanconi anemia group M helicase, [Score=90.1, Expect=7e-18]} {Celegans: WBGene00001090, drh-1, Dicer Related Helicase; Dicer-related helicase, [RH, Score=208, Expect=5e-55]} {Smed: dd_Smed_v6_3742_0_1, dd_Smed_v6_3742_0_1, [RH, Score=355, Expect=2e-104]} {RNA1509_9178} {RNA1310_2530.3} {RNA815_790.1}
3.	MligTC455_25177	330	6.87	Mlig455_058575	Neo: - Age: Up-Down-Down		0.957	-	-	-	-	-	0.957	Mlig455_058575 {REF} {Length: 3172} {RNA1509_34496, RNA1509_56824} {RNA1310_29369, RNA1509_34496} {RNA1509_34496, RNA815_24472}
4.	MligTC455_42286	59	1.22	Mlig455_042711	Neo: - Age: -	GPR83	0.952	-	-	-	-	0.952	-	Mlig455_042711 {REF} {Length: 1706} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=100.2]} {Human: ENSG00000123901, GPR83, G protein-coupled receptor 83, [Score=67.8, Expect=1e-11]} {Mouse: ENSMUSG00000031932, Gpr83, G protein-coupled receptor 83, [Score=68.2, Expect=5e-12]; ENSMUSG00000020090, Npffr1, neuropeptide FF receptor 1, [Score=67.4, Expect=1e-11]; ENSMUSG00000048337, Npy4r, neuropeptide Y receptor Y4, [Score=67.4, Expect=9e-12]} {Dmel: FBgn0004622, TkR99D, Tachykinin-like receptor at 99D, [Score=90.9, Expect=2e-19]} {Celegans: WBGene00021897, ser-6, SERotonin/octopamine receptor family, [Score=64.3, Expect=5e-11]} {Smed: dd_Smed_v6_29182_0_1, dd_Smed_v6_29182_0_1, [Score=67.8, Expect=3e-12]} {RNA1310_19087.1} {RNA815_19700}
5.	MligTC455_42886	494	10.29	Mlig455_004248	Neo: - Age: -	AL136295.1	0.95	-	-	-	-	-	0.950	Mlig455_004248 {REF} {Length: 3161} {TRANSSPLICED} {Pfam: Endomembrane protein 70 [PF02990.18, score=493.4]} {Human: ENSG00000254692, AL136295.1, novel protein, [RH, Score=692, Expect=0.0]; ENSG00000285502, AL136295.15, novel protein, [RH, Score=692, Expect=0.0]; ENSG00000100926, TM9SF1, transmembrane 9 superfamily member 1, [RH, Score=685, Expect=0.0]; ENSG00000285465, TM9SF1, transmembrane 9 superfamily member 1, [RH, Score=685, Expect=0.0]} {Mouse: ENSMUSG00000002320, Tm9sf1, transmembrane 9 superfamily member 1, [RH, Score=683, Expect=0.0]} {Dmel: FBgn0035622, TM9SF3, Transmembrane 9 superfamily protein member 3, [Score=332, Expect=3e-106]} {Celegans: WBGene00021506, Y41D4A.4, Transmembrane 9 superfamily member, [Score=346, Expect=9e-112]} {Smed: dd_Smed_v6_4115_0_1, dd_Smed_v6_4115_0_1, [RH, Score=618, Expect=0.0]} {RNA1509_11922, RNA1509_20805, RNA1509_23244, RNA1509_47900, RNA1509_57407} {RNA1310_10868, RNA1509_11922, RNA1509_20805, RNA1509_23244, RNA1509_47900, RNA1509_57407} {RNA1509_11922, RNA1509_20805, RNA1509_23244, RNA1509_47900, RNA1509_57407, RNA815_2853}