Data search
Results for MligTC455_21530
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_21530 | 504 | 10.50 | Mlig455_007737 | Neo: - Age: Up-Down-Down Region-enriched R5: 1.884/0.00594 |
FRA10AC1 | Mlig455_007737 {REF} {Length: 1379} {Pfam: Folate-sensitive fragile site protein Fra10Ac1 [PF09725.11, score=163.1]} {Human: ENSG00000148690, FRA10AC1, FRA10A associated CGG repeat 1, [RH, Score=243, Expect=8e-78]} {Mouse: ENSMUSG00000054237, Fra10ac1, FRA10AC1 homolog (human), [RH, Score=248, Expect=6e-80]} {Dmel: FBgn0028932, CG16890, [RH, Score=181, Expect=6e-55]} {Celegans: WBGene00086566, C08H9.16, [RH, Score=196, Expect=6e-60]} {Smed: dd_Smed_v6_7308_0_1, dd_Smed_v6_7308_0_1, [RH, Score=182, Expect=4e-54]} {RNA1509_16234} {RNA1310_22638} {RNA815_11678} |
Cumulative graph for MligTC455_21530
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.086 | 3.825 | 0.03619 | 0.47069 | |
| RegionR2 | 1.18 | 3.825 | 0.15633 | 0.49480 | |
| RegionR3 | 1.112 | 3.825 | 0.13466 | 0.62836 | |
| RegionR4 | 1.058 | 3.825 | 0.18373 | 0.45537 | |
| RegionR5 | 1.884 | 3.825 | 0.00050 | 0.00594 | |
| RegionR6 | 1.152 | 3.825 | 0.12464 | 0.64233 | |
| RegionR7 | 1.217 | 3.825 | 0.15467 | 0.72735 | |
| RegionR8 | -0.517 | 3.825 | 0.95747 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.251 | 3.825 | 0.99997 | 1.00000 | |
| RegenerationR2 | 0.084 | 3.825 | 0.82137 | 0.99544 | |
| RegenerationR3 | 0.211 | 3.825 | 0.62520 | 0.91798 | |
| RegenerationR4 | 0.309 | 3.825 | 0.47713 | 0.85711 | |
| RegenerationR5 | 0.257 | 3.825 | 0.47879 | 0.84645 | |
| RegenerationR6 | -0.088 | 3.825 | 0.84460 | 0.99784 | |
| RegenerationBL | 0.499 | 3.825 | 0.39326 | 0.76166 | |
| RegenerationTP | -0.045 | 3.825 | 0.95784 | 1.00000 |
Genes with expression patterns similar to MligTC455_21530
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_21530 | 504 | 10.5 | Mlig455_007737 | Neo: - Age: Up-Down-Down Region-enriched R5: 1.884/0.00594 |
FRA10AC1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_007737 {REF} {Length: 1379} {Pfam: Folate-sensitive fragile site protein Fra10Ac1 [PF09725.11, score=163.1]} {Human: ENSG00000148690, FRA10AC1, FRA10A associated CGG repeat 1, [RH, Score=243, Expect=8e-78]} {Mouse: ENSMUSG00000054237, Fra10ac1, FRA10AC1 homolog (human), [RH, Score=248, Expect=6e-80]} {Dmel: FBgn0028932, CG16890, [RH, Score=181, Expect=6e-55]} {Celegans: WBGene00086566, C08H9.16, [RH, Score=196, Expect=6e-60]} {Smed: dd_Smed_v6_7308_0_1, dd_Smed_v6_7308_0_1, [RH, Score=182, Expect=4e-54]} {RNA1509_16234} {RNA1310_22638} {RNA815_11678} |
| 2. | MligTC455_21529 | 567 | 11.81 | Mlig455_007725 | Neo: - Age: - Region-enriched R5: 1.781/0.00946 |
FRA10AC1 | 5.611 | 0.995 | 0.999 | 0.988 | 0.977 | 0.799 | 0.853 | Mlig455_007725 {REF} {Length: 5082} {TRANSSPLICED} {Pfam: Folate-sensitive fragile site protein Fra10Ac1 [PF09725.11, score=160.1]; Zinc finger, C2H2 type [PF00096.28, score=42.2]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=30.6]; C2H2-type zinc finger [PF13894.8, score=29.2]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=26.4]} {Human: ENSG00000148690, FRA10AC1, FRA10A associated CGG repeat 1, [RH, Score=236, Expect=5e-69]} {Mouse: ENSMUSG00000054237, Fra10ac1, FRA10AC1 homolog (human), [RH, Score=238, Expect=9e-70]} {Dmel: FBgn0028932, CG16890, [RH, Score=177, Expect=1e-49]} {Celegans: WBGene00086566, C08H9.16, [RH, Score=188, Expect=8e-53]} {Smed: dd_Smed_v6_7308_0_1, dd_Smed_v6_7308_0_1, [RH, Score=178, Expect=1e-48]} {RNA1509_15205} {RNA1310_1734} {RNA815_11678} |
| 3. | MligTC455_40504 | 747 | 15.55 | Mlig455_046809, Mlig455_069965 | Neo: - Age: logFC(26M/2M)=-0.362 |
FAM81A | 0.96 | - | - | - | - | 0.960 | - | Mlig455_046809 {REF} {Length: 2773} {TRANSSPLICED} {Human: ENSG00000157470, FAM81A, family with sequence similarity 81 member A, [RH, Score=138, Expect=1e-36]} {Mouse: ENSMUSG00000032224, Fam81a, family with sequence similarity 81, member A, [RH, Score=135, Expect=4e-36]; ENSMUSG00000109228, Fam81b, family with sequence similarity 81, member B, [RH, Score=134, Expect=7e-35]} {Smed: dd_Smed_v6_13185_0_1, dd_Smed_v6_13185_0_1, [RH, Score=251, Expect=2e-80]} {RNA1509_22796, RNA1509_4545} {RNA1310_18883, RNA1509_22796} {RNA1509_22796, RNA815_6683} Mlig455_069965 {REF} {Length: 2693} {TRANSSPLICED} {Pfam: Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) [PF09712.12, score=22.4]; Apoptogenic protein 1 [PF10231.11, score=20.2]} {Human: ENSG00000157470, FAM81A, family with sequence similarity 81 member A, [RH, Score=138, Expect=6e-36]} {Mouse: ENSMUSG00000032224, Fam81a, family with sequence similarity 81, member A, [RH, Score=135, Expect=3e-35]; ENSMUSG00000109228, Fam81b, family with sequence similarity 81, member B, [RH, Score=132, Expect=9e-34]} {Smed: dd_Smed_v6_13185_0_1, dd_Smed_v6_13185_0_1, [RH, Score=246, Expect=3e-77]} {RNA1509_4545} {RNA1310_18883} {RNA815_6683} |
| 4. | MligTC455_11019 | 143 | 2.98 | Mlig455_009834 | Neo: - Age: - |
SLC12A8 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_009834 {REF} {Length: 3565} {TRANSSPLICED} {Pfam: Amino acid permease [PF00324.23, score=133.7]; CobD/Cbib protein [PF03186.15, score=19.3]} {Human: ENSG00000221955, SLC12A8, solute carrier family 12 member 8, [RH, Score=333, Expect=9e-104]} {Mouse: ENSMUSG00000035506, Slc12a8, solute carrier family 12 (potassium/chloride transporters), member 8, [RH, Score=317, Expect=5e-98]} {Dmel: FBgn0024365, CG12773, [RH, Score=443, Expect=2e-146]} {Celegans: WBGene00017350, F10E7.9, [RH, Score=338, Expect=3e-107]} {Smed: dd_Smed_v6_8108_0_1, dd_Smed_v6_8108_0_1, [Score=431, Expect=2e-142]} {RNA1509_13545, RNA1509_60159} {RNA1310_9630.1, RNA1509_60159} {RNA1509_60159, RNA815_6334} |
| 5. | MligTC455_40829 | 1042 | 21.71 | Mlig455_004086 | Neo: Irradiation Age: - Region-enriched R5: 1.361/0.00088 |
TMUB2 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_004086 {REF} {Length: 1885} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=24.7]} {Human: ENSG00000168591, TMUB2, transmembrane and ubiquitin like domain containing 2, [RH, Score=63.9, Expect=1e-10]} {Mouse: ENSMUSG00000034757, Tmub2, transmembrane and ubiquitin-like domain containing 2, [RH, Score=69.3, Expect=1e-12]} {Smed: dd_Smed_v6_5590_0_1, dd_Smed_v6_5590_0_1, [Score=84.7, Expect=3e-18]} {RNA1509_16033, RNA1509_48842} {RNA1310_15248, RNA1509_16033, RNA1509_48842} {RNA1509_16033, RNA1509_48842, RNA815_5852} |
Berezikov Lab - 2020-2021 © ERIBA