Data search
Results for MligTC455_21540
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_21540 | 303 | 6.31 | Mlig455_031861 | Neo: Int S/G2/M Age: Down-Down-Up |
GFM1 | Mlig455_031861 {REF} {Length: 2971} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=202.5]; Elongation factor G, domain IV [PF03764.20, score=123.8]; Elongation Factor G, domain III [PF14492.8, score=93.4]; Elongation factor G C-terminus [PF00679.26, score=81.0]; Elongation factor Tu domain 2 [PF03144.27, score=55.1]; Class II release factor RF3, C-terminal domain [PF16658.7, score=29.8]} {Human: ENSG00000168827, GFM1, G elongation factor mitochondrial 1, [RH, Score=899, Expect=0.0]} {Mouse: ENSMUSG00000027774, Gfm1, G elongation factor, mitochondrial 1, [RH, Score=908, Expect=0.0]} {Dmel: FBgn0263133, mEFG1, mitochondrial translation elongation factor G 1, [RH, Score=956, Expect=0.0]} {Celegans: WBGene00009246, gfm-1, Elongation factor G, mitochondrial, [RH, Score=817, Expect=0.0]} {Smed: dd_Smed_v6_1879_0_1, dd_Smed_v6_1879_0_1, [RH, Score=915, Expect=0.0]} {RNA1509_16105} {RNA1310_6805.2} {RNA815_2051} |
Cumulative graph for MligTC455_21540
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.576 | 3.282 | 0.21867 | 0.86063 | |
| RegionR2 | 1.177 | 3.282 | 0.27543 | 0.66058 | |
| RegionR3 | 0.76 | 3.282 | 0.41997 | 0.94359 | |
| RegionR4 | 1.554 | 3.282 | 0.11082 | 0.32926 | |
| RegionR5 | 1.607 | 3.282 | 0.02521 | 0.11429 | |
| RegionR6 | 0.288 | 3.282 | 0.73086 | 1.00000 | |
| RegionR7 | 0.457 | 3.282 | 0.66143 | 1.00000 | |
| RegionR8 | -0.267 | 3.282 | 0.92402 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.649 | 3.282 | 0.99984 | 1.00000 | |
| RegenerationR2 | 0.48 | 3.282 | 0.44235 | 0.84114 | |
| RegenerationR3 | 1.439 | 3.282 | 0.04331 | 0.36380 | |
| RegenerationR4 | 1.506 | 3.282 | 0.03316 | 0.29395 | |
| RegenerationR5 | 1.019 | 3.282 | 0.08961 | 0.46063 | |
| RegenerationR6 | 2.272 | 3.282 | 0.00117 | 0.03778 | |
| RegenerationBL | 2.1 | 3.282 | 0.01561 | 0.13173 | |
| RegenerationTP | -0.196 | 3.282 | 0.85424 | 1.00000 |
Genes with expression patterns similar to MligTC455_21540
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_21540 | 303 | 6.31 | Mlig455_031861 | Neo: Int S/G2/M Age: Down-Down-Up |
GFM1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_031861 {REF} {Length: 2971} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=202.5]; Elongation factor G, domain IV [PF03764.20, score=123.8]; Elongation Factor G, domain III [PF14492.8, score=93.4]; Elongation factor G C-terminus [PF00679.26, score=81.0]; Elongation factor Tu domain 2 [PF03144.27, score=55.1]; Class II release factor RF3, C-terminal domain [PF16658.7, score=29.8]} {Human: ENSG00000168827, GFM1, G elongation factor mitochondrial 1, [RH, Score=899, Expect=0.0]} {Mouse: ENSMUSG00000027774, Gfm1, G elongation factor, mitochondrial 1, [RH, Score=908, Expect=0.0]} {Dmel: FBgn0263133, mEFG1, mitochondrial translation elongation factor G 1, [RH, Score=956, Expect=0.0]} {Celegans: WBGene00009246, gfm-1, Elongation factor G, mitochondrial, [RH, Score=817, Expect=0.0]} {Smed: dd_Smed_v6_1879_0_1, dd_Smed_v6_1879_0_1, [RH, Score=915, Expect=0.0]} {RNA1509_16105} {RNA1310_6805.2} {RNA815_2051} |
| 2. | MligTC455_54110 | 148 | 3.08 | Mlig455_035263 | Neo: - Age: - |
1.673 | 0.711 | - | - | - | - | 0.962 | Mlig455_035263 {REF} {Length: 3676} {TRANSSPLICED} {RNA1509_36649} {RNA1310_5371} {RNA815_31423} | |
| 3. | MligTC455_41320 | 411 | 8.56 | Mlig455_021770, Mlig455_050825 | Neo: - Age: logFC(26M/2M)=0.444 Region-enriched R3: 2.511/0.00608 |
HAO1 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_021770 {REF} {Length: 2133} {TRANSSPLICED} {Pfam: FMN-dependent dehydrogenase [PF01070.20, score=420.5]; IMP dehydrogenase / GMP reductase domain [PF00478.27, score=22.9]; Conserved region in glutamate synthase [PF01645.19, score=22.3]; Thiazole biosynthesis protein ThiG [PF05690.16, score=18.8]} {Human: ENSG00000101323, HAO1, hydroxyacid oxidase 1, [RH, Score=366, Expect=5e-125]} {Mouse: ENSMUSG00000027261, Hao1, hydroxyacid oxidase 1, liver, [RH, Score=359, Expect=1e-122]} {Dmel: FBgn0061356, CG18003, [RH, Score=337, Expect=4e-114]} {Celegans: WBGene00018286, F41E6.5, [RH, Score=301, Expect=7e-100]} {Smed: dd_Smed_v6_10691_0_1, dd_Smed_v6_10691_0_1, [RH, Score=298, Expect=2e-98]} {RNA1509_24577} {RNA1310_12624.1, RNA1509_24577} {RNA1509_24577, RNA815_6361} Mlig455_050825 {REF} {Length: 2223} {TRANSSPLICED} {Pfam: FMN-dependent dehydrogenase [PF01070.20, score=421.1]; IMP dehydrogenase / GMP reductase domain [PF00478.27, score=22.9]; Conserved region in glutamate synthase [PF01645.19, score=22.3]; Thiazole biosynthesis protein ThiG [PF05690.16, score=18.8]} {Human: ENSG00000101323, HAO1, hydroxyacid oxidase 1, [RH, Score=365, Expect=7e-125]} {Mouse: ENSMUSG00000027261, Hao1, hydroxyacid oxidase 1, liver, [RH, Score=358, Expect=3e-122]} {Dmel: FBgn0061356, CG18003, [RH, Score=338, Expect=3e-114]} {Celegans: WBGene00018286, F41E6.5, [RH, Score=301, Expect=8e-100]} {Smed: dd_Smed_v6_10691_0_1, dd_Smed_v6_10691_0_1, [RH, Score=298, Expect=2e-98]} {RNA1509_24577, RNA1509_32520} {RNA1310_12624.1, RNA1509_32520} {RNA1509_32520, RNA815_6361} |
| 4. | MligTC455_27608 | 262 | 5.45 | Mlig455_031163 | Neo: - Age: Up-Down-Down |
ITPR1 | 0.954 | - | - | 0.954 | - | - | - | Mlig455_031163 {REF} {Length: 9294} {Pfam: RIH domain [PF01365.23, score=106.4]; Inositol 1,4,5-trisphosphate/ryanodine receptor [PF08709.13, score=82.5]; RyR and IP3R Homology associated [PF08454.13, score=71.4]; MIR domain [PF02815.21, score=49.4]; Ion transport protein [PF00520.33, score=29.4]} {Human: ENSG00000150995, ITPR1, inositol 1,4,5-trisphosphate receptor type 1, [Score=231, Expect=1e-59]; ENSG00000096433, ITPR3, inositol 1,4,5-trisphosphate receptor type 3, [Score=227, Expect=2e-58]} {Mouse: ENSMUSG00000042644, Itpr3, inositol 1,4,5-triphosphate receptor 3, [Score=236, Expect=2e-61]; ENSMUSG00000030102, Itpr1, inositol 1,4,5-trisphosphate receptor 1, [Score=226, Expect=1e-58]} {Dmel: FBgn0010051, Itp-r83A, Inositol 1,4,5,-tris-phosphate receptor, [Score=214, Expect=5e-55]} {Celegans: WBGene00002173, itr-1, Inositol 1,4,5-trisphosphate receptor itr-1, [Score=181, Expect=8e-45]} {Smed: dd_Smed_v6_3814_1_1, dd_Smed_v6_3814_1_1, [Score=1880, Expect=0.0]} {RNA1509_17046} {RNA1310_1857, RNA1509_17046} {RNA1509_17046, RNA815_770} |
| 5. | MligTC455_14821 | 305 | 6.35 | Mlig455_018773 | Neo: - Age: Up-Down-Down Region-enriched R3: 2.196/0.03323 |
PANK1 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_018773 {REF} {Length: 2765} {Pfam: Fumble [PF03630.16, score=101.1]} {Human: ENSG00000152782, PANK1, pantothenate kinase 1, [Score=55.5, Expect=6e-08]} {Mouse: ENSMUSG00000029056, Pank4, pantothenate kinase 4, [Score=79.7, Expect=9e-16]} {Dmel: FBgn0011205, fbl, fumble, [Score=56.2, Expect=2e-08]} {Celegans: WBGene00004068, pnk-1, PaNtothenate Kinase, [Score=73.2, Expect=5e-14]} {Smed: dd_Smed_v6_2075_0_1, dd_Smed_v6_2075_0_1, [Score=182, Expect=4e-54]} {RNA1509_12016} {RNA1310_16423} {RNA815_7574.1} |
| 6. | MligTC455_19223 | 419 | 8.73 | Mlig455_036573 | Neo: - Age: - Region-enriched R5: 3.465/0.00000 |
0.951 | - | - | - | 0.951 | - | - | Mlig455_036573 {REF} {Length: 541} {NoTransDecoderORF} {RNA1509_39234} {RNA1310_8765} {RNA815_981.2} |
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