TomoSeq data search

Data search

Results for MligTC455_21575

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_21575	1292	26.92	Mlig455_002748	Neo: Irradiation Age: - Region-enriched R5: 1.584/0.00380	BACE1	Mlig455_002748 {REF} {Length: 3072} {Pfam: Eukaryotic aspartyl protease [PF00026.25, score=144.2]; Xylanase inhibitor C-terminal [PF14541.8, score=32.2]; Xylanase inhibitor N-terminal [PF14543.8, score=21.1]} {Human: ENSG00000186318, BACE1, beta-secretase 1, [RH, Score=372, Expect=1e-123]} {Mouse: ENSMUSG00000032086, Bace1, beta-site APP cleaving enzyme 1, [RH, Score=374, Expect=1e-124]} {Dmel: FBgn0032304, CG17134, [Score=112, Expect=7e-27]} {Celegans: WBGene00000217, asp-4, ASpartyl Protease, [Score=83.2, Expect=6e-17]} {Smed: dd_Smed_v6_4132_0_1, dd_Smed_v6_4132_0_1, [RH, Score=231, Expect=2e-69]} {RNA1509_15479, RNA1509_35794, RNA1509_40117, RNA1509_6473} {RNA1310_13668, RNA1509_15479, RNA1509_35794, RNA1509_40117} {RNA1509_15479, RNA1509_35794, RNA1509_40117, RNA815_5089}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_21575

1292

26.92

Mlig455_002748

Neo: Irradiation

Age: -

Region-enriched R5: 1.584/0.00380

BACE1

Mlig455_002748 {REF} {Length: 3072} {Pfam: Eukaryotic aspartyl protease [PF00026.25, score=144.2]; Xylanase inhibitor C-terminal [PF14541.8, score=32.2]; Xylanase inhibitor N-terminal [PF14543.8, score=21.1]} {Human: ENSG00000186318, BACE1, beta-secretase 1, [RH, Score=372, Expect=1e-123]} {Mouse: ENSMUSG00000032086, Bace1, beta-site APP cleaving enzyme 1, [RH, Score=374, Expect=1e-124]} {Dmel: FBgn0032304, CG17134, [Score=112, Expect=7e-27]} {Celegans: WBGene00000217, asp-4, ASpartyl Protease, [Score=83.2, Expect=6e-17]} {Smed: dd_Smed_v6_4132_0_1, dd_Smed_v6_4132_0_1, [RH, Score=231, Expect=2e-69]} {RNA1509_15479, RNA1509_35794, RNA1509_40117, RNA1509_6473} {RNA1310_13668, RNA1509_15479, RNA1509_35794, RNA1509_40117} {RNA1509_15479, RNA1509_35794, RNA1509_40117, RNA815_5089}

Cumulative graph for MligTC455_21575

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.156	5.002	0.86336	1.00000
RegionR2	-0.077	5.002	0.90070	1.00000
RegionR3	-0.561	5.002	0.30261	0.84442
RegionR4	-1.899	5.002	0.00252	0.02131
RegionR5	1.584	5.002	0.00028	0.00380
RegionR6	0.185	5.002	0.70422	1.00000
RegionR7	1.107	5.002	0.02035	0.26489
RegionR8	-0.495	5.002	0.46493	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.775	5.002	0.56757	1.00000
RegenerationR2	-0.013	5.002	0.98130	1.00000
RegenerationR3	0.623	5.002	0.33501	0.76013
RegenerationR4	1.397	5.002	0.03475	0.30090
RegenerationR5	-0.476	5.002	0.42812	0.81677
RegenerationR6	-0.629	5.002	0.33199	0.67803
RegenerationBL	-0.926	5.002	0.15652	0.47335
RegenerationTP	-0.129	5.002	0.84676	1.00000

Genes with expression patterns similar to MligTC455_21575

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_21575	1292	26.92	Mlig455_002748	Neo: Irradiation Age: - Region-enriched R5: 1.584/0.00380	BACE1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_002748 {REF} {Length: 3072} {Pfam: Eukaryotic aspartyl protease [PF00026.25, score=144.2]; Xylanase inhibitor C-terminal [PF14541.8, score=32.2]; Xylanase inhibitor N-terminal [PF14543.8, score=21.1]} {Human: ENSG00000186318, BACE1, beta-secretase 1, [RH, Score=372, Expect=1e-123]} {Mouse: ENSMUSG00000032086, Bace1, beta-site APP cleaving enzyme 1, [RH, Score=374, Expect=1e-124]} {Dmel: FBgn0032304, CG17134, [Score=112, Expect=7e-27]} {Celegans: WBGene00000217, asp-4, ASpartyl Protease, [Score=83.2, Expect=6e-17]} {Smed: dd_Smed_v6_4132_0_1, dd_Smed_v6_4132_0_1, [RH, Score=231, Expect=2e-69]} {RNA1509_15479, RNA1509_35794, RNA1509_40117, RNA1509_6473} {RNA1310_13668, RNA1509_15479, RNA1509_35794, RNA1509_40117} {RNA1509_15479, RNA1509_35794, RNA1509_40117, RNA815_5089}
2.	MligTC455_51528	921	19.18	Mlig455_020631	Neo: - Age: - Region-enriched R5: 1.263/0.02274		2.608	0.838	0.812	-	-	-	0.958	Mlig455_020631 {REF} {Length: 1347} {RNA1509_3230} {RNA1310_14103} {RNA815_5179}
3.	MligTC455_51529	971	20.22	Mlig455_048820	Neo: - Age: logFC(26M/2M)=0.322 Region-enriched R5: 1.252/0.02512	PPP1R3C	2.607	0.845	0.800	-	-	-	0.962	Mlig455_048820 {REF} {Length: 2011} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=91.2]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=59.8]} {Human: ENSG00000119938, PPP1R3C, protein phosphatase 1 regulatory subunit 3C, [RH, Score=117, Expect=2e-29]} {Mouse: ENSMUSG00000046794, Ppp1r3b, protein phosphatase 1, regulatory subunit 3B, [RH, Score=110, Expect=2e-27]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=110, Expect=2e-27]} {Smed: dd_Smed_v6_1526_0_1, dd_Smed_v6_1526_0_1, [RH, Score=91.3, Expect=7e-21]} {RNA1509_3230} {RNA1310_14103, RNA1509_3230} {RNA1509_3230, RNA815_5179}
4.	MligTC455_47814	221	4.61	Mlig455_032906	Neo: Irradiation Age: logFC(26M/2M)=0.627		1.761	0.807	-	-	-	-	0.954	Mlig455_032906 {REF} {Length: 1359} {RNA1509_8146} {RNA1310_2998.1} {RNA815_978}
5.	MligTC455_49110	155	3.23	Mlig455_006529, Mlig455_006645	Neo: - Age: - Region-enriched R4: 3.272/0.04020		0.957	-	-	-	-	-	0.957	Mlig455_006529 {REF} {Length: 4092} {TRANSSPLICED} {RNA1509_48868} {RNA1310_23809.1, RNA1509_48868} {RNA1509_48868, RNA815_16307} Mlig455_006645 {REF} {Length: 4921} {Pfam: Transmembrane family 220, helix [PF15071.8, score=60.7]} {Mouse: ENSMUSG00000050270, Tmem220, transmembrane protein 220, [RH, Score=65.9, Expect=4e-12]} {RNA1509_48868} {RNA1310_23809.1} {RNA815_16307}