Data search
Results for MligTC455_21600
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_21600 | 94 | 1.95 | Mlig455_057687 | Neo: Irradiation Age: Up-Down-Up Region-enriched R4: 5.186/0.00000 |
REEP4 | Mlig455_057687 {REF} {Length: 3084} {Pfam: TB2/DP1, HVA22 family [PF03134.21, score=89.0]} {Human: ENSG00000168476, REEP4, receptor accessory protein 4, [RH, Score=145, Expect=5e-42]; ENSG00000132563, REEP2, receptor accessory protein 2, [RH, Score=144, Expect=7e-42]} {Mouse: ENSMUSG00000038555, Reep2, receptor accessory protein 2, [RH, Score=144, Expect=5e-42]; ENSMUSG00000033589, Reep4, receptor accessory protein 4, [RH, Score=139, Expect=3e-40]; ENSMUSG00000019873, Reep3, receptor accessory protein 3, [RH, Score=138, Expect=1e-39]} {Dmel: FBgn0261564, Reep1, Receptor expression enhancing protein 1, [RH, Score=165, Expect=2e-47]} {Celegans: WBGene00020562, T19C3.4, [RH, Score=135, Expect=3e-39]} {Smed: dd_Smed_v6_5799_0_2, dd_Smed_v6_5799_0_2, [Score=171, Expect=1e-52]} {RNA1509_35810} {RNA1310_29760, RNA1509_35810} {RNA1509_35810, RNA815_17933} |
Cumulative graph for MligTC455_21600
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.228 | 1.937 | 0.99947 | 1.00000 | |
| RegionR2 | -0.1 | 1.937 | 0.78516 | 1.00000 | |
| RegionR3 | 0.037 | 1.937 | 0.76782 | 1.00000 | |
| RegionR4 | 5.186 | 1.937 | 0.00000 | 0.00000 | |
| RegionR5 | 2.02 | 1.937 | 0.05742 | 0.20651 | |
| RegionR6 | 2.112 | 1.937 | 0.05538 | 0.44206 | |
| RegionR7 | -0.693 | 1.937 | 0.90687 | 1.00000 | |
| RegionR8 | -4.335 | 1.937 | 0.99950 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.157 | 1.937 | 0.99954 | 1.00000 | |
| RegenerationR2 | -0.051 | 1.937 | 0.93867 | 1.00000 | |
| RegenerationR3 | 0.707 | 1.937 | 0.44884 | 0.83124 | |
| RegenerationR4 | -0.521 | 1.937 | 0.38365 | 0.80371 | |
| RegenerationR5 | 0.139 | 1.937 | 0.83788 | 1.00000 | |
| RegenerationR6 | 0.534 | 1.937 | 0.47005 | 0.78434 | |
| RegenerationBL | -0.466 | 1.937 | 0.88935 | 1.00000 | |
| RegenerationTP | 4.087 | 1.937 | 0.02176 | 0.25113 |
Genes with expression patterns similar to MligTC455_21600
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_21600 | 94 | 1.95 | Mlig455_057687 | Neo: Irradiation Age: Up-Down-Up Region-enriched R4: 5.186/0.00000 |
REEP4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_057687 {REF} {Length: 3084} {Pfam: TB2/DP1, HVA22 family [PF03134.21, score=89.0]} {Human: ENSG00000168476, REEP4, receptor accessory protein 4, [RH, Score=145, Expect=5e-42]; ENSG00000132563, REEP2, receptor accessory protein 2, [RH, Score=144, Expect=7e-42]} {Mouse: ENSMUSG00000038555, Reep2, receptor accessory protein 2, [RH, Score=144, Expect=5e-42]; ENSMUSG00000033589, Reep4, receptor accessory protein 4, [RH, Score=139, Expect=3e-40]; ENSMUSG00000019873, Reep3, receptor accessory protein 3, [RH, Score=138, Expect=1e-39]} {Dmel: FBgn0261564, Reep1, Receptor expression enhancing protein 1, [RH, Score=165, Expect=2e-47]} {Celegans: WBGene00020562, T19C3.4, [RH, Score=135, Expect=3e-39]} {Smed: dd_Smed_v6_5799_0_2, dd_Smed_v6_5799_0_2, [Score=171, Expect=1e-52]} {RNA1509_35810} {RNA1310_29760, RNA1509_35810} {RNA1509_35810, RNA815_17933} |
| 2. | MligTC455_02838 | 73 | 1.52 | Mlig455_004860 | Neo: - Age: - |
0.979 | - | - | - | - | 0.979 | - | Mlig455_004860 {REF} {Length: 843} {NoTransDecoderORF} {RNA1509_13499} {RNA1310_194.1} {RNA815_27158} |
Berezikov Lab - 2020-2021 © ERIBA