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Results for MligTC455_21611

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_21611 3584 74.67 Mlig455_037057

Neo: -

Age: -

 RHOA Mlig455_037057 {REF} {Length: 1916} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=195.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=81.4]; ADP-ribosylation factor family [PF00025.23, score=40.4]; Elongation factor Tu GTP binding domain [PF00009.29, score=24.0]} {Human: ENSG00000067560, RHOA, ras homolog family member A, [RH, Score=355, Expect=2e-126]; ENSG00000155366, RHOC, ras homolog family member C, [RH, Score=344, Expect=3e-122]} {Mouse: ENSMUSG00000007815, Rhoa, ras homolog family member A, [RH, Score=355, Expect=1e-126]; ENSMUSG00000002233, Rhoc, ras homolog family member C, [RH, Score=344, Expect=2e-122]} {Dmel: FBgn0014020, Rho1, [RH, Score=341, Expect=2e-121]} {Celegans: WBGene00004357, rho-1, Ras-like GTP-binding protein rhoA, [RH, Score=337, Expect=7e-120]} {Smed: dd_Smed_v6_813_0_1, dd_Smed_v6_813_0_1, [RH, Score=340, Expect=2e-121]} {RNA1509_16337, RNA1509_1941} {RNA1310_14887, RNA1509_16337, RNA1509_1941} {RNA1509_16337, RNA1509_1941, RNA815_5384.1}

Cumulative graph for MligTC455_21611

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.413 6.252 0.48303 1.00000
RegionR2 -0.318 6.252 0.37212 0.76685
RegionR3 -0.247 6.252 0.42875 0.94920
RegionR4 0.778 6.252 0.02861 0.13139
RegionR5 -0.1 6.252 0.74554 1.00000
RegionR6 0.138 6.252 0.65473 1.00000
RegionR7 0.385 6.252 0.23563 0.85994
RegionR8 -0.223 6.252 0.58802 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.52 6.252 0.51148 1.00000
RegenerationR2 0.141 6.252 0.69745 0.95527
RegenerationR3 0.161 6.252 0.67395 0.93850
RegenerationR4 -0.243 6.252 0.53142 0.88462
RegenerationR5 0.66 6.252 0.08042 0.44065
RegenerationR6 0.217 6.252 0.57239 0.85313
RegenerationBL 0.265 6.252 0.44369 0.81086
RegenerationTP 0.435 6.252 0.24865 0.69571


Genes with expression patterns similar to MligTC455_21611

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_21611 3584 74.67 Mlig455_037057

Neo: -

Age: -

 RHOA 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_037057 {REF} {Length: 1916} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=195.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=81.4]; ADP-ribosylation factor family [PF00025.23, score=40.4]; Elongation factor Tu GTP binding domain [PF00009.29, score=24.0]} {Human: ENSG00000067560, RHOA, ras homolog family member A, [RH, Score=355, Expect=2e-126]; ENSG00000155366, RHOC, ras homolog family member C, [RH, Score=344, Expect=3e-122]} {Mouse: ENSMUSG00000007815, Rhoa, ras homolog family member A, [RH, Score=355, Expect=1e-126]; ENSMUSG00000002233, Rhoc, ras homolog family member C, [RH, Score=344, Expect=2e-122]} {Dmel: FBgn0014020, Rho1, [RH, Score=341, Expect=2e-121]} {Celegans: WBGene00004357, rho-1, Ras-like GTP-binding protein rhoA, [RH, Score=337, Expect=7e-120]} {Smed: dd_Smed_v6_813_0_1, dd_Smed_v6_813_0_1, [RH, Score=340, Expect=2e-121]} {RNA1509_16337, RNA1509_1941} {RNA1310_14887, RNA1509_16337, RNA1509_1941} {RNA1509_16337, RNA1509_1941, RNA815_5384.1}
2. MligTC455_21610 2283 47.56 Mlig455_009646

Neo: -

Age: Down-Down-Up

 RHOA 3.586 0.885 0.958 0.874 - - 0.869 Mlig455_009646 {REF} {Length: 1905} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=195.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=81.4]; ADP-ribosylation factor family [PF00025.23, score=40.4]; Elongation factor Tu GTP binding domain [PF00009.29, score=24.0]} {Human: ENSG00000067560, RHOA, ras homolog family member A, [RH, Score=355, Expect=2e-126]; ENSG00000155366, RHOC, ras homolog family member C, [RH, Score=344, Expect=3e-122]} {Mouse: ENSMUSG00000007815, Rhoa, ras homolog family member A, [RH, Score=355, Expect=1e-126]; ENSMUSG00000002233, Rhoc, ras homolog family member C, [RH, Score=344, Expect=2e-122]} {Dmel: FBgn0014020, Rho1, [RH, Score=341, Expect=2e-121]} {Celegans: WBGene00004357, rho-1, Ras-like GTP-binding protein rhoA, [RH, Score=337, Expect=7e-120]} {Smed: dd_Smed_v6_813_0_1, dd_Smed_v6_813_0_1, [RH, Score=340, Expect=2e-121]} {RNA1509_1941} {RNA1310_14887} {RNA815_5384.1}
3. MligTC455_45573 512 10.67 Mlig455_009859

Neo: -

Age: Down-Down-Up

 TIA1 0.968 - - - - 0.968 - Mlig455_009859 {REF} {Length: 2779} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=139.0]; RNA recognition motif [PF16367.7, score=31.5]; RNA binding motif [PF08777.13, score=22.6]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=21.4]; Occluded RNA-recognition motif [PF16842.7, score=21.3]; Cytosolic domain of 10TM putative phosphate transporter [PF14703.8, score=19.7]; Histone lysine methyltransferase SET associated [PF11767.10, score=18.7]} {Human: ENSG00000116001, TIA1, TIA1 cytotoxic granule associated RNA binding protein, [Score=218, Expect=5e-67]; ENSG00000151923, TIAL1, TIA1 cytotoxic granule associated RNA binding protein like 1, [Score=209, Expect=2e-63]} {Mouse: ENSMUSG00000071337, Tia1, cytotoxic granule-associated RNA binding protein 1, [Score=216, Expect=1e-66]; ENSMUSG00000030846, Tial1, Tia1 cytotoxic granule-associated RNA binding protein-like 1, [Score=211, Expect=6e-65]} {Dmel: FBgn0085391, trv, trivet, [RH, Score=231, Expect=3e-71]} {Celegans: WBGene00015943, tiar-1, TIA-1/TIAL RNA binding protein homolog, [Score=210, Expect=1e-65]} {Smed: dd_Smed_v6_10924_0_1, dd_Smed_v6_10924_0_1, [Score=319, Expect=5e-107]} {RNA1509_12173} {RNA1310_17261.1, RNA1509_12173} {RNA1509_12173, RNA815_23801}

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