Data search
Results for MligTC455_21617
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_21617 | 71 | 1.47 | Mlig455_006725 | Neo: - Age: - |
KXD1 | Mlig455_006725 {REF} {Length: 2268} {TRANSSPLICED} {Pfam: Uncharacterized conserved protein [PF10241.11, score=74.8]} {Human: ENSG00000105700, KXD1, KxDL motif containing 1, [RH, Score=82.4, Expect=4e-20]} {Mouse: ENSMUSG00000055553, Kxd1, KxDL motif containing 1, [RH, Score=80.1, Expect=6e-19]} {Dmel: FBgn0036291, CG10681, [RH, Score=73.9, Expect=2e-16]} {Celegans: WBGene00015742, kxd-1, KXDl (KxDL) motif containing homolog, [Score=59.7, Expect=8e-12]} {Smed: dd_Smed_v6_4564_0_1, dd_Smed_v6_4564_0_1, [RH, Score=70.9, Expect=2e-16]} {RNA1509_33785} {RNA1310_17136} {RNA815_26835} |
Cumulative graph for MligTC455_21617
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.056 | 1.672 | 0.30014 | 0.94957 | |
| RegionR2 | 3.157 | 1.672 | 0.01824 | 0.14443 | |
| RegionR3 | 0.601 | 1.672 | 0.52633 | 1.00000 | |
| RegionR4 | -3.863 | 1.672 | 0.01599 | 0.08657 | |
| RegionR5 | -0.616 | 1.672 | 0.36138 | 0.71350 | |
| RegionR6 | -0.018 | 1.672 | 0.95007 | 1.00000 | |
| RegionR7 | 0.893 | 1.672 | 0.45712 | 1.00000 | |
| RegionR8 | 1.903 | 1.672 | 0.24240 | 0.85920 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.158 | 1.672 | 0.91309 | 1.00000 | |
| RegenerationR2 | -2.203 | 1.672 | 0.15636 | 0.59298 | |
| RegenerationR3 | 0.837 | 1.672 | 0.44547 | 0.83002 | |
| RegenerationR4 | 1.974 | 1.672 | 0.17049 | 0.60698 | |
| RegenerationR5 | 0.233 | 1.672 | 0.69006 | 0.94790 | |
| RegenerationR6 | 2.615 | 1.672 | 0.05812 | 0.30246 | |
| RegenerationBL | -2.91 | 1.672 | 0.33949 | 0.70624 | |
| RegenerationTP | 0.455 | 1.672 | 0.74244 | 1.00000 |
Genes with expression patterns similar to MligTC455_21617
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_21617 | 71 | 1.47 | Mlig455_006725 | Neo: - Age: - |
KXD1 | 3 | 1.000 | 1.000 | - | - | 1.000 | - | Mlig455_006725 {REF} {Length: 2268} {TRANSSPLICED} {Pfam: Uncharacterized conserved protein [PF10241.11, score=74.8]} {Human: ENSG00000105700, KXD1, KxDL motif containing 1, [RH, Score=82.4, Expect=4e-20]} {Mouse: ENSMUSG00000055553, Kxd1, KxDL motif containing 1, [RH, Score=80.1, Expect=6e-19]} {Dmel: FBgn0036291, CG10681, [RH, Score=73.9, Expect=2e-16]} {Celegans: WBGene00015742, kxd-1, KXDl (KxDL) motif containing homolog, [Score=59.7, Expect=8e-12]} {Smed: dd_Smed_v6_4564_0_1, dd_Smed_v6_4564_0_1, [RH, Score=70.9, Expect=2e-16]} {RNA1509_33785} {RNA1310_17136} {RNA815_26835} |
| 2. | MligTC455_39036 | 111 | 2.31 | Mlig455_025027 | Neo: - Age: - |
MID1 | 0.98 | - | - | - | - | 0.980 | - | Mlig455_025027 {REF} {Length: 3351} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=38.7]; RING-type zinc-finger [PF13445.8, score=36.6]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=36.0]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=33.1]; zinc-RING finger domain [PF14634.8, score=28.8]; Ring finger domain [PF13639.8, score=28.7]; zinc finger of C3HC4-type, RING [PF15227.8, score=28.5]; Prokaryotic RING finger family 4 [PF14447.8, score=23.7]; U-box domain [PF04564.17, score=21.4]; B-box zinc finger [PF00643.26, score=21.1]} {Human: ENSG00000101871, MID1, midline 1, [RH, Score=80.9, Expect=3e-15]} {Mouse: ENSMUSG00000035299, Mid1, midline 1, [Score=83.2, Expect=5e-16]; ENSMUSG00000000266, Mid2, midline 2, [Score=82.4, Expect=9e-16]} {Dmel: FBgn0265356, tn, thin, [Score=54.7, Expect=3e-07]} {Celegans: WBGene00016539, madd-2, [Score=63.9, Expect=3e-10]} {Smed: dd_Smed_v6_6290_0_1, dd_Smed_v6_6290_0_1, [Score=56.6, Expect=3e-08]} {RNA1509_31988} {RNA1310_8538, RNA1509_31988} {RNA1509_31988, RNA815_4019.1} |
| 3. | MligTC455_37492 | 360 | 7.51 | Mlig455_023894 | Neo: Int S/G2/M Age: Up-Down-Up Region-enriched R4: 3.072/0.00219 |
TDRD9 | 0.973 | - | - | - | - | 0.973 | - | Mlig455_023894 {REF} {Length: 5447} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=43.9]; DEAD/DEAH box helicase [PF00270.31, score=33.1]; Helicase associated domain (HA2) [PF04408.25, score=32.5]} {Human: ENSG00000156414, TDRD9, tudor domain containing 9, [Score=395, Expect=7e-120]} {Mouse: ENSMUSG00000054003, Tdrd9, tudor domain containing 9, [Score=385, Expect=3e-116]} {Dmel: FBgn0003483, spn-E, spindle E, [Score=388, Expect=3e-117]} {Celegans: WBGene00004355, rha-1, Probable ATP-dependent RNA helicase A, [Score=247, Expect=3e-68]} {Smed: dd_Smed_v6_5842_0_1, dd_Smed_v6_5842_0_1, [Score=449, Expect=8e-139]} {RNA1509_2841} {RNA1310_750.1} {RNA815_310.1} |
| 4. | MligTC455_08128 | 126 | 2.62 | Mlig455_060515 | Neo: Germline Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_060515 {REF} {Length: 701} {RNA1509_54069} {RNA1310_34680.2} {RNA815_15951} | |
| 5. | MligTC455_05104 | 7 | 0.15 | Mlig455_044215 | Neo: - Age: - |
0.963 | - | - | - | - | 0.963 | - | Mlig455_044215 {REF} {Length: 866} {NoTransDecoderORF} {RNA1509_15277} {RNA1310_22069} {RNA815_17936.1} | |
| 6. | MligTC455_17109 | 16 | 0.34 | Mlig455_052533 | Neo: - Age: logFC(26M/2M)=1.201 |
0.957 | - | - | - | - | 0.957 | - | Mlig455_052533 {REF} {Length: 5477} {Pfam: Phage integrase family [PF00589.24, score=36.3]} {RNA1509_57857} {RNA1310_23997.1} {RNA815_7697} |
Berezikov Lab - 2020-2021 © ERIBA