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Results for MligTC455_21666

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_21666 1631 33.98 Mlig455_010573

Neo: -

Age: Down-Up-Down

 Mlig455_010573 {REF} {Length: 4298} {Pfam: BNIP3 [PF06553.14, score=22.0]} {RNA1509_11000, RNA1509_24385, RNA1509_27914} {RNA1310_4467.1, RNA1509_11000, RNA1509_24385} {RNA1509_11000, RNA1509_24385, RNA815_12540}

Cumulative graph for MligTC455_21666

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.043 5.334 0.14749 0.76111
RegionR2 0.312 5.334 0.37615 0.77089
RegionR3 0.097 5.334 0.74332 1.00000
RegionR4 -0.032 5.334 0.92316 1.00000
RegionR5 0.608 5.334 0.02332 0.10818
RegionR6 0.183 5.334 0.53698 1.00000
RegionR7 -0.072 5.334 0.83808 1.00000
RegionR8 -0.053 5.334 0.89910 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -8.055 5.334 0.01540 0.52225
RegenerationR2 -0.218 5.334 0.50077 0.87195
RegenerationR3 -0.156 5.334 0.65628 0.93158
RegenerationR4 0.083 5.334 0.81455 0.99113
RegenerationR5 -0.342 5.334 0.29182 0.71947
RegenerationR6 -0.44 5.334 0.22053 0.56462
RegenerationBL -1.139 5.334 0.00659 0.07875
RegenerationTP 0.404 5.334 0.29987 0.74521


Genes with expression patterns similar to MligTC455_21666

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_21666 1631 33.98 Mlig455_010573

Neo: -

Age: Down-Up-Down

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_010573 {REF} {Length: 4298} {Pfam: BNIP3 [PF06553.14, score=22.0]} {RNA1509_11000, RNA1509_24385, RNA1509_27914} {RNA1310_4467.1, RNA1509_11000, RNA1509_24385} {RNA1509_11000, RNA1509_24385, RNA815_12540}
2. MligTC455_19996 1327 27.64 Mlig455_040679, Mlig455_064542

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.357

Region-enriched R4: 1.353/0.00087

 1.715 - - 0.742 0.973 - -

Mlig455_040679 {REF} {Length: 1076} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4207) [PF13904.8, score=33.8]} {RNA1509_18707} {RNA1310_25620, RNA1509_18707} {RNA1509_18707, RNA815_17844}

Mlig455_064542 {REF} {Length: 1060} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4207) [PF13904.8, score=33.5]} {RNA1509_18707} {RNA1310_25620} {RNA815_17844}
3. MligTC455_44561 1920 40 Mlig455_057194

Neo: -

Age: logFC(26M/2M)=0.185

 NBR1 0.957 - - - 0.957 - - Mlig455_057194 {REF} {Length: 3269} {Pfam: Zinc finger, ZZ type [PF00569.19, score=41.7]; UBA/TS-N domain [PF00627.33, score=19.6]} {Human: ENSG00000188554, NBR1, NBR1, autophagy cargo receptor, [RH, Score=60.5, Expect=1e-08]} {Mouse: ENSMUSG00000015837, Sqstm1, sequestosome 1, [Score=64.7, Expect=2e-10]} {Dmel: FBgn0003231, ref(2)P, refractory to sigma P, [Score=55.5, Expect=1e-07]} {Celegans: WBGene00011737, sqst-1, SeQueSTosome related, [RH, Score=62.8, Expect=6e-10]} {Smed: dd_Smed_v6_2812_0_1, dd_Smed_v6_2812_0_1, [RH, Score=54.7, Expect=7e-08]} {RNA1509_10260, RNA1509_33571} {RNA1310_6559, RNA1509_10260, RNA1509_33571} {RNA1509_10260, RNA1509_33571, RNA815_1176}
4. MligTC455_49618 3111 64.81 Mlig455_023147, Mlig455_023235, Mlig455_023302

Neo: Irradiation

Age: -

Regeneration-upregulated R6: 1.248

Regeneration-enriched R6: 1.248

 SMARCAD1 0.955 - - 0.955 - - -

Mlig455_023147 {REF} {Length: 5106} {Pfam: SNF2-related domain [PF00176.25, score=186.9]; Type III restriction enzyme, res subunit [PF04851.17, score=36.7]; CUE domain [PF02845.18, score=23.0]; Helix-hairpin-helix motif [PF12836.9, score=21.6]; P-loop containing NTP hydrolase pore-1 [PF13872.8, score=18.4]} {Human: ENSG00000163104, SMARCAD1, SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, [Score=362, Expect=1e-108]} {Mouse: ENSMUSG00000029920, Smarcad1, SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, [Score=360, Expect=2e-108]} {Dmel: FBgn0032157, Etl1, [Score=310, Expect=2e-91]} {Celegans: WBGene00010845, M03C11.8, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 homolog, [Score=290, Expect=2e-83]} {Smed: dd_Smed_v6_9378_0_1, dd_Smed_v6_9378_0_1, [Score=381, Expect=4e-115]} {RNA1509_18362, RNA1509_4745} {RNA1310_533.1, RNA1509_18362, RNA1509_4745} {RNA1509_18362, RNA1509_4745, RNA815_3531}

Mlig455_023235 {REF} {Length: 4631} {Pfam: SNF2-related domain [PF00176.25, score=193.8]; Helicase conserved C-terminal domain [PF00271.33, score=68.5]; Type III restriction enzyme, res subunit [PF04851.17, score=35.9]; CUE domain [PF02845.18, score=23.0]; Helix-hairpin-helix motif [PF12836.9, score=21.1]; P-loop containing NTP hydrolase pore-1 [PF13872.8, score=17.9]} {Human: ENSG00000163104, SMARCAD1, SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, [RH, Score=600, Expect=0.0]} {Mouse: ENSMUSG00000029920, Smarcad1, SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, [RH, Score=603, Expect=0.0]} {Dmel: FBgn0032157, Etl1, [RH, Score=553, Expect=2e-179]} {Celegans: WBGene00010845, M03C11.8, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 homolog, [RH, Score=507, Expect=2e-160]} {Smed: dd_Smed_v6_7560_0_1, dd_Smed_v6_7560_0_1, [RH, Score=595, Expect=0.0]} {RNA1509_18362} {RNA1310_533.1} {RNA815_3531}

Mlig455_023302 {REF} {Length: 5083} {Pfam: SNF2-related domain [PF00176.25, score=192.9]; Helicase conserved C-terminal domain [PF00271.33, score=65.7]; Type III restriction enzyme, res subunit [PF04851.17, score=35.7]; CUE domain [PF02845.18, score=22.9]; Helix-hairpin-helix motif [PF12836.9, score=21.0]; P-loop containing NTP hydrolase pore-1 [PF13872.8, score=17.8]} {Human: ENSG00000163104, SMARCAD1, SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, [RH, Score=602, Expect=0.0]} {Mouse: ENSMUSG00000029920, Smarcad1, SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, [RH, Score=605, Expect=0.0]} {Dmel: FBgn0032157, Etl1, [RH, Score=551, Expect=2e-178]} {Celegans: WBGene00010845, M03C11.8, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 homolog, [RH, Score=504, Expect=5e-159]} {Smed: dd_Smed_v6_7560_0_1, dd_Smed_v6_7560_0_1, [RH, Score=592, Expect=0.0]} {RNA1509_4745} {RNA1310_533.1} {RNA815_3531}
5. MligTC455_41243 2079 43.3 Mlig455_045879

Neo: -

Age: Down-Down-Up

 0.953 - - - 0.953 - - Mlig455_045879 {REF} {Length: 1840} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=43.7]; PPPDE putative peptidase domain [PF05903.16, score=19.9]} {RNA1509_18091, RNA1509_42801, RNA1509_43636, RNA1509_8578} {RNA1310_14958, RNA1509_18091, RNA1509_42801, RNA1509_43636, RNA1509_8578} {RNA1509_18091, RNA1509_42801, RNA1509_43636, RNA1509_8578, RNA815_6637.1}

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