TomoSeq data search

Data search

Results for MligTC455_21715

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_21715

43

0.90

Mlig455_050014

Neo: -

Age: -

Mlig455_050014 {REF} {Length: 1196} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_26792} {RNA1310_38157}

Cumulative graph for MligTC455_21715

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.983	1.136	0.99990	1.00000
RegionR2	3.466	1.136	0.99990	1.00000
RegionR3	0.836	1.136	0.99999	1.00000
RegionR4	-2.806	1.136	0.99982	1.00000
RegionR5	-0.237	1.136	0.99993	1.00000
RegionR6	0.855	1.136	0.99998	1.00000
RegionR7	1.018	1.136	0.99996	1.00000
RegionR8	0.851	1.136	0.99996	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	4.134	1.136	0.99996	1.00000
RegenerationR2	4.801	1.136	0.00109	0.04882
RegenerationR3	4.898	1.136	0.01371	0.21479
RegenerationR4	5.861	1.136	0.00135	0.04342
RegenerationR5	4.542	1.136	0.00458	0.12253
RegenerationR6	6.603	1.136	0.00045	0.02206
RegenerationBL	4.499	1.136	0.05054	0.25885
RegenerationTP	4.942	1.136	0.05849	0.39265

Genes with expression patterns similar to MligTC455_21715

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_21715	43	0.9	Mlig455_050014	Neo: - Age: -		2	-	-	-	-	1.000	1.000	Mlig455_050014 {REF} {Length: 1196} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_26792} {RNA1310_38157}
2.	MligTC455_50381	14	0.3	Mlig455_027815	Neo: - Age: -		0.979	-	-	-	-	0.979	-	Mlig455_027815 {REF} {Length: 231} {NoTransDecoderORF} {RNA1509_59553} {RNA1310_102766} {RNA815_64986}
3.	MligTC455_03361	23	0.49	Mlig455_045846	Neo: - Age: - Regeneration-enriched R4: 8.309 Regeneration-enriched R3: 7.698 Regeneration-enriched R5: 6.907 Regeneration-enriched R2: 5.726		0.959	-	-	-	-	-	0.959	Mlig455_045846 {REF} {Length: 525} {RNA1310_134422} {RNA815_64754}
4.	MligTC455_29446	56	1.17	Mlig455_061415	Neo: - Age: Up-Down-Down, logFC(26M/2M)=1.157		0.959	-	-	-	-	-	0.959	Mlig455_061415 {REF} {Length: 3889} {Pfam: OB-fold nucleic acid binding domain [PF01336.27, score=48.5]; Replication protein A OB domain [PF16900.7, score=46.7]; RecG wedge domain [PF17191.6, score=18.9]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [Score=89.4, Expect=2e-19]} {RNA1509_10085} {RNA1310_6627.1, RNA1509_10085} {RNA1509_10085, RNA815_3343}
5.	MligTC455_02838	73	1.52	Mlig455_004860	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_004860 {REF} {Length: 843} {NoTransDecoderORF} {RNA1509_13499} {RNA1310_194.1} {RNA815_27158}
6.	MligTC455_47576	262	5.46	Mlig455_036621	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_036621 {REF} {Length: 2988} {TRANSSPLICED} {Mouse: ENSMUSG00000021057, Akap5, A kinase (PRKA) anchor protein 5, [Score=58.9, Expect=6e-09]} {RNA1509_38746} {RNA1310_14642} {RNA815_23597}
7.	MligTC455_26051	78	1.63	Mlig455_062437	Neo: - Age: -	ARRB1	0.95	-	-	-	-	0.950	-	Mlig455_062437 {REF} {Length: 6527} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=106.9]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=84.3]} {Human: ENSG00000137486, ARRB1, arrestin beta 1, [RH, Score=471, Expect=2e-163]; ENSG00000141480, ARRB2, arrestin beta 2, [RH, Score=464, Expect=1e-160]} {Mouse: ENSMUSG00000018909, Arrb1, arrestin, beta 1, [RH, Score=469, Expect=2e-162]; ENSMUSG00000060216, Arrb2, arrestin, beta 2, [RH, Score=466, Expect=3e-161]} {Dmel: FBgn0040206, krz, kurtz, [RH, Score=473, Expect=3e-163]} {Celegans: WBGene00000195, arr-1, Probable beta-arrestin, [RH, Score=473, Expect=3e-164]} {Smed: dd_Smed_v6_5512_0_2, dd_Smed_v6_5512_0_2, [RH, Score=587, Expect=0.0]} {RNA1509_33667, RNA1509_9005} {RNA1310_9541, RNA1509_33667} {RNA1509_33667, RNA815_3201}

Berezikov Lab - 2020-2021 © ERIBA