M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_21736

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_21736 54 1.12 Mlig455_023919, Mlig455_040958, Mlig455_057346

Neo: Germline

Age: logFC(26M/2M)=-0.873

 RTL1

Mlig455_023919 {REF} {Length: 557} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=93.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=85.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=47.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=76.3, Expect=1e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=174, Expect=5e-49]} {RNA1509_49309} {RNA1310_936} {RNA815_13565}

Mlig455_040958 {REF} {Length: 4329} {Pfam: Integrase core domain [PF00665.28, score=33.0]; Integrase core domain [PF13683.8, score=23.1]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=58.5, Expect=5e-10]} {RNA1509_30470} {RNA1310_936} {RNA815_2209}

Mlig455_057346 {REF} {Length: 4336} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=109.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=109.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=90.8]; Integrase zinc binding domain [PF17921.3, score=61.0]; Integrase core domain [PF00665.28, score=42.4]; H2C2 zinc finger [PF09337.12, score=36.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.7]; Integrase core domain [PF13683.8, score=20.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=77.8, Expect=1e-13]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=264, Expect=4e-73]} {RNA1509_30470, RNA1509_49309, RNA1509_8154} {RNA1310_936, RNA1509_30470, RNA1509_49309, RNA1509_8154} {RNA1509_30470, RNA1509_49309, RNA1509_8154, RNA815_2209}

Cumulative graph for MligTC455_21736

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.681 1.707 0.99961 1.00000
RegionR2 3.929 1.707 0.30814 0.69908
RegionR3 1.244 1.707 0.25652 0.80104
RegionR4 -0.761 1.707 0.99782 1.00000
RegionR5 -2.575 1.707 0.99963 1.00000
RegionR6 -1.999 1.707 0.99963 1.00000
RegionR7 3.596 1.707 0.02530 0.29854
RegionR8 0.247 1.707 0.88804 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 3.923 1.707 0.98688 1.00000
RegenerationR2 4.791 1.707 0.00047 0.02960
RegenerationR3 3.781 1.707 0.00429 0.11849
RegenerationR4 1.579 1.707 0.06988 0.42016
RegenerationR5 2.433 1.707 0.22626 0.66012
RegenerationR6 5.554 1.707 0.00553 0.09003
RegenerationBL 5.147 1.707 0.00433 0.05980
RegenerationTP -0.134 1.707 0.99966 1.00000


Genes with expression patterns similar to MligTC455_21736

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_21736 54 1.12 Mlig455_023919, Mlig455_040958, Mlig455_057346

Neo: Germline

Age: logFC(26M/2M)=-0.873

 RTL1 4 1.000 1.000 - - 1.000 1.000

Mlig455_023919 {REF} {Length: 557} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=93.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=85.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=47.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=76.3, Expect=1e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=174, Expect=5e-49]} {RNA1509_49309} {RNA1310_936} {RNA815_13565}

Mlig455_040958 {REF} {Length: 4329} {Pfam: Integrase core domain [PF00665.28, score=33.0]; Integrase core domain [PF13683.8, score=23.1]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=58.5, Expect=5e-10]} {RNA1509_30470} {RNA1310_936} {RNA815_2209}

Mlig455_057346 {REF} {Length: 4336} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=109.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=109.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=90.8]; Integrase zinc binding domain [PF17921.3, score=61.0]; Integrase core domain [PF00665.28, score=42.4]; H2C2 zinc finger [PF09337.12, score=36.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.7]; Integrase core domain [PF13683.8, score=20.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=77.8, Expect=1e-13]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=264, Expect=4e-73]} {RNA1509_30470, RNA1509_49309, RNA1509_8154} {RNA1310_936, RNA1509_30470, RNA1509_49309, RNA1509_8154} {RNA1509_30470, RNA1509_49309, RNA1509_8154, RNA815_2209}
2. MligTC455_30044 264 5.49 Mlig455_003041, Mlig455_006184, Mlig455_011552, Mlig455_014494, Mlig455_051067

Neo: Germline

Age: -

Region-specific R4: 5.436

 RTL1 2.826 0.952 0.949 - - - 0.925

Mlig455_003041 {REF} {Length: 2593} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=95.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=81.0]; Integrase zinc binding domain [PF17921.3, score=73.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=48.1]; Integrase core domain [PF00665.28, score=28.6]; H2C2 zinc finger [PF09337.12, score=27.1]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=115, Expect=1e-25]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [RH, Score=103, Expect=3e-22]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [RH, Score=103, Expect=3e-22]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=237, Expect=2e-66]} {RNA1509_14295} {RNA1310_1396.1} {RNA815_549.1}

Mlig455_006184 {REF} {Length: 3323} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=102.7]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=95.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=81.5]; Integrase zinc binding domain [PF17921.3, score=72.3]; Integrase core domain [PF00665.28, score=28.5]; H2C2 zinc finger [PF09337.12, score=26.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [RH, Score=126, Expect=9e-29]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [RH, Score=108, Expect=2e-23]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [RH, Score=108, Expect=2e-23]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=329, Expect=4e-97]} {RNA1509_14295} {RNA1310_1396.1} {RNA815_549.1}

Mlig455_011552 {REF} {Length: 4931} {Smed: dd_Smed_v6_7411_0_1, dd_Smed_v6_7411_0_1, [Score=49.7, Expect=8e-07]} {RNA1509_14295} {RNA1310_1396.1, RNA1509_14295} {RNA1509_14295, RNA815_549.1}

Mlig455_014494 {REF} {Length: 5296} {Smed: dd_Smed_v6_7411_0_1, dd_Smed_v6_7411_0_1, [RH, Score=50.4, Expect=4e-07]} {RNA1509_14295} {RNA1310_1396.1} {RNA815_549.1}

Mlig455_051067 {REF} {Length: 4916} {Smed: dd_Smed_v6_7411_0_1, dd_Smed_v6_7411_0_1, [RH, Score=50.4, Expect=4e-07]} {RNA1509_14295} {RNA1310_1396.1} {RNA815_549.1}
3. MligTC455_38794 57 1.19 Mlig455_060981

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.282

Region-specific R4: 6.581

Region-enriched R4: 4.921/0.00000

 2.785 0.893 0.973 - - - 0.919 Mlig455_060981 {REF} {Length: 3214} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=55.9]; YheC/D like ATP-grasp [PF14398.8, score=24.3]} {Smed: dd_Smed_v6_41668_0_1, dd_Smed_v6_41668_0_1, [Score=48.5, Expect=4e-06]} {RNA1509_29867, RNA1509_4675, RNA1509_6648} {RNA1310_7854.1, RNA1509_29867, RNA1509_4675, RNA1509_6648} {RNA1509_29867, RNA1509_4675, RNA1509_6648, RNA815_8173.1}
4. MligTC455_28304 360 7.5 Mlig455_039819, Mlig455_067988

Neo: Germline

Age: Down-Down-Down

Region-specific R4: 5.355

Region-enriched R4: 3.130/0.00049

 2.749 0.973 0.910 - - - 0.866

Mlig455_039819 {REF} {Length: 642} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51681} {RNA1310_928.1} {RNA815_529.1}

Mlig455_067988 {REF} {Length: 5022} {RNA1509_51631, RNA1509_51681} {RNA1310_928.1, RNA1509_51631, RNA1509_51681} {RNA1509_51631, RNA1509_51681, RNA815_529.1}
5. MligTC455_34730 353 7.36 Mlig455_059492

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.912

Region-enriched R4: 2.217/0.00297

 SELPLG 2.729 0.971 0.852 - - - 0.906 Mlig455_059492 {REF} {Length: 10282} {Human: ENSG00000110876, SELPLG, selectin P ligand, [RH, Score=67.8, Expect=2e-10]} {Mouse: ENSMUSG00000030607, Acan, aggrecan, [Score=67.0, Expect=5e-10]} {Celegans: WBGene00009362, F33E2.6, [Score=69.7, Expect=3e-11]} {RNA1509_13152, RNA1509_14289, RNA1509_1721, RNA1509_44903, RNA1509_45720, RNA1509_58852} {RNA1310_233.1, RNA1509_13152, RNA1509_14289, RNA1509_44903, RNA1509_45720, RNA1509_58852} {RNA1509_13152, RNA1509_14289, RNA1509_44903, RNA1509_45720, RNA1509_58852, RNA815_257}
6. MligTC455_04517 28 0.57 Mlig455_025173, Mlig455_025184

Neo: -

Age: logFC(26M/2M)=1.043

 PRR9 2.727 0.970 0.919 - - - 0.838

Mlig455_025173 {REF} {Length: 3203} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=45.1, Expect=1e-05]} {RNA1509_54738} {RNA1310_57001.1} {RNA815_46717}

Mlig455_025184 {REF} {Length: 845} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=47.0, Expect=2e-06]} {RNA1310_66346}
7. MligTC455_31927 52 1.09 Mlig455_068193

Neo: -

Age: -

Region-enriched R4: 3.790/0.04231

 2.72 0.945 0.952 - - - 0.823 Mlig455_068193 {REF} {Length: 2308} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=121.9]} {Celegans: WBGene00019136, F59H6.5, [Score=147, Expect=3e-38]} {RNA1509_52720} {RNA1310_63836, RNA1509_52720} {RNA1509_52720, RNA815_1650.1}
8. MligTC455_35514 33 0.69 Mlig455_041140

Neo: Irradiation

Age: -

Region-enriched R4: 5.469/0.00005

 2.718 0.971 0.915 - - - 0.832 Mlig455_041140 {REF} {Length: 1467} {RNA1509_8592} {RNA1310_43895.1} {RNA815_21669.2}
9. MligTC455_20010 83 1.72 Mlig455_003143, Mlig455_062747

Neo: -

Age: Up-Down-Down

 2.712 - 0.791 - - 0.951 0.970

Mlig455_003143 {REF} {Length: 2444} {NoTransDecoderORF} {RNA1509_20444} {RNA1310_68389} {RNA815_19417}

Mlig455_062747 {REF} {Length: 1276} {NoTransDecoderORF} {RNA1509_20444} {RNA1310_126134} {RNA815_134.1}
10. MligTC455_23484 3490 72.7 Mlig455_010547, Mlig455_061788, Mlig455_061828

Neo: Germline

Age: -

Region-specific R4: 5.178

Region-enriched R4: 4.109/0.00000

Regeneration-downregulated R4: -2.976

Regeneration-depleted R4: -2.976

 SRI 2.609 0.960 0.917 - - - 0.732

Mlig455_010547 {REF} {Length: 2009} {Pfam: EF hand [PF00036.34, score=44.0]; EF-hand domain [PF13405.8, score=40.5]; EF-hand domain pair [PF13499.8, score=32.8]; EF hand [PF13202.8, score=25.4]} {Human: ENSG00000075142, SRI, sorcin, [Score=121, Expect=5e-34]; ENSG00000115271, GCA, grancalcin, [Score=119, Expect=1e-32]} {Mouse: ENSMUSG00000003161, Sri, sorcin, [RH, Score=119, Expect=5e-33]} {Dmel: FBgn0086378, Alg-2, Apoptosis-linked gene-2, [Score=78.6, Expect=6e-18]} {Celegans: WBGene00019770, M04F3.4, [Score=76.6, Expect=3e-17]} {Smed: dd_Smed_v6_3585_0_1, dd_Smed_v6_3585_0_1, [Score=90.1, Expect=2e-22]} {RNA1509_11825, RNA1509_50965} {RNA1310_25008.1, RNA1509_50965} {RNA1509_50965, RNA815_8403.2}

Mlig455_061788 {REF} {Length: 2113} {Pfam: EF hand [PF00036.34, score=40.8]; EF-hand domain [PF13405.8, score=36.0]; EF-hand domain pair [PF13499.8, score=32.1]; EF hand [PF13202.8, score=25.4]; EF-hand domain pair [PF13833.8, score=19.6]} {Human: ENSG00000075142, SRI, sorcin, [RH, Score=118, Expect=5e-33]} {Mouse: ENSMUSG00000003161, Sri, sorcin, [Score=117, Expect=2e-32]; ENSMUSG00000026893, Gca, grancalcin, [Score=115, Expect=4e-31]} {Smed: dd_Smed_v6_1457_0_1, dd_Smed_v6_1457_0_1, [Score=86.3, Expect=5e-21]} {RNA1509_19096, RNA1509_29326, RNA1509_6611, RNA1509_7662} {RNA1310_25492.1, RNA1509_19096, RNA1509_29326, RNA1509_6611, RNA1509_7662} {RNA1509_19096, RNA1509_29326, RNA1509_6611, RNA1509_7662, RNA815_8403.2}

Mlig455_061828 {REF} {Length: 2105} {Pfam: EF hand [PF00036.34, score=40.8]; EF-hand domain [PF13405.8, score=36.0]; EF-hand domain pair [PF13499.8, score=32.1]; EF hand [PF13202.8, score=25.4]; EF-hand domain pair [PF13833.8, score=19.6]} {Human: ENSG00000075142, SRI, sorcin, [RH, Score=118, Expect=5e-33]} {Mouse: ENSMUSG00000003161, Sri, sorcin, [Score=117, Expect=2e-32]; ENSMUSG00000026893, Gca, grancalcin, [Score=115, Expect=4e-31]} {Smed: dd_Smed_v6_1457_0_1, dd_Smed_v6_1457_0_1, [Score=86.3, Expect=5e-21]} {RNA1509_7662} {RNA1310_25492.1} {RNA815_8403.2}
11. MligTC455_29851 54 1.13 Mlig455_051234

Neo: Irradiation

Age: logFC(26M/2M)=-1.035

 2.607 0.942 0.953 - - - 0.712 Mlig455_051234 {REF} {Length: 2048} {RNA1310_14012} {RNA815_30076}
12. MligTC455_23662 285 5.95 Mlig455_025104

Neo: Irradiation

Age: -

Region-specific R4: 5.419

Region-enriched R4: 3.777/0.00001

 2.595 0.952 0.805 - - - 0.838 Mlig455_025104 {REF} {Length: 4467} {RNA1509_23438} {RNA1310_48896, RNA1509_23438}
13. MligTC455_23393 118 2.46 Mlig455_031685, Mlig455_035573

Neo: Germline

Age: Down-Up-Down

Region-specific R4: 6.411

Region-enriched R4: 3.978/0.00010

 2.595 0.980 0.901 - - - 0.714

Mlig455_031685 {REF} {Length: 1044} {TRANSSPLICED} {Pfam: Homeodomain-like domain [PF13565.8, score=19.3]} {RNA1509_21915} {RNA1310_9985} {RNA815_5533.1}

Mlig455_035573 {REF} {Length: 1145} {Pfam: Homeodomain-like domain [PF13565.8, score=20.1]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=51.2, Expect=6e-09]} {RNA1509_18910} {RNA1310_9985} {RNA815_5533.1}
14. MligTC455_33465 184 3.84 Mlig455_015592

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.335

Region-specific R4: 6.019

Region-enriched R4: 3.801/0.00296

 ATP6V0A4 2.582 0.977 0.886 - - - 0.719 Mlig455_015592 {REF} {Length: 4675} {Pfam: V-type ATPase 116kDa subunit family [PF01496.21, score=438.4]} {Human: ENSG00000105929, ATP6V0A4, ATPase H+ transporting V0 subunit a4, [Score=285, Expect=1e-82]; ENSG00000185344, ATP6V0A2, ATPase H+ transporting V0 subunit a2, [Score=285, Expect=2e-82]; ENSG00000033627, ATP6V0A1, ATPase H+ transporting V0 subunit a1, [Score=277, Expect=7e-80]} {Mouse: ENSMUSG00000019302, Atp6v0a1, ATPase, H+ transporting, lysosomal V0 subunit A1, [Score=294, Expect=4e-86]; ENSMUSG00000038600, Atp6v0a4, ATPase, H+ transporting, lysosomal V0 subunit A4, [Score=282, Expect=6e-82]} {Dmel: FBgn0028670, Vha100-2, Vacuolar H[+] ATPase 100kD subunit 2, [Score=300, Expect=1e-88]} {Celegans: WBGene00006914, vha-5, V-type proton ATPase subunit a, [Score=275, Expect=3e-79]} {Smed: dd_Smed_v6_4805_0_1, dd_Smed_v6_4805_0_1, [Score=298, Expect=5e-88]} {RNA1509_24348} {RNA1310_4759, RNA1509_24348} {RNA1509_24348, RNA815_5389}
15. MligTC455_19478 234 4.88 Mlig455_003678

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.823

Region-enriched R4: 3.689/0.00011

 2.579 0.956 0.895 - - 0.728 - Mlig455_003678 {REF} {Length: 1182} {RNA1509_18170, RNA1509_29806} {RNA1310_50142, RNA1509_18170, RNA1509_29806} {RNA1509_18170, RNA1509_29806, RNA815_25360}
16. MligTC455_24608 162 3.38 Mlig455_063917

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.804

Region-enriched R4: 4.013/0.00001

 2.576 0.952 0.810 - - - 0.814 Mlig455_063917 {REF} {Length: 3729} {RNA1509_24235, RNA1509_34605} {RNA1310_3011, RNA1509_24235, RNA1509_34605} {RNA1509_24235, RNA1509_34605, RNA815_901}
17. MligTC455_23387 661 13.78 Mlig455_012641, Mlig455_039219, Mlig455_044560

Neo: Int S/G2/M

Age: -

Region-specific R4: 4.357

Region-enriched R4: 2.845/0.00000

 2.568 0.967 0.878 - - - 0.723

Mlig455_012641 {REF} {Length: 3409} {Pfam: Homeodomain-like domain [PF13565.8, score=20.0]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=42.4, Expect=9e-06]} {RNA1509_18910, RNA1509_21915, RNA1509_35410, RNA1509_49138} {RNA1310_9985, RNA1509_18910, RNA1509_21915, RNA1509_35410, RNA1509_49138} {RNA1509_18910, RNA1509_21915, RNA1509_35410, RNA1509_49138, RNA815_5533.1}

Mlig455_039219 {REF} {Length: 2661} {Pfam: Homeodomain-like domain [PF13565.8, score=20.0]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=42.4, Expect=9e-06]} {RNA1509_21915} {RNA1310_9985} {RNA815_5533.1}

Mlig455_044560 {REF} {Length: 2628} {Pfam: Homeodomain-like domain [PF13565.8, score=20.0]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=42.4, Expect=9e-06]} {RNA1509_21915} {RNA1310_9985} {RNA815_5533.1}
18. MligTC455_21587 453 9.43 Mlig455_029279

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.611

Regeneration-downregulated R4: -3.076

Regeneration-depleted R4: -3.076

 GPCPD1 2.547 0.886 0.950 - - - 0.711 Mlig455_029279 {REF} {Length: 2262} {Pfam: Glycerophosphoryl diester phosphodiesterase family [PF03009.19, score=125.6]} {Human: ENSG00000125772, GPCPD1, glycerophosphocholine phosphodiesterase 1, [Score=107, Expect=5e-25]} {Mouse: ENSMUSG00000027346, Gpcpd1, glycerophosphocholine phosphodiesterase 1, [Score=104, Expect=9e-25]} {Dmel: FBgn0031566, CG2818, [Score=92.4, Expect=1e-20]} {Celegans: WBGene00011511, gpcp-2, Putative glycerophosphocholine phosphodiesterase GPCPD1 homolog 2, [Score=90.5, Expect=5e-20]} {Smed: dd_Smed_v6_7518_0_2, dd_Smed_v6_7518_0_2, [Score=99.8, Expect=7e-24]} {RNA1509_57811} {RNA1310_28682.1} {RNA815_14999.3}
19. MligTC455_45022 194 4.05 Mlig455_024605

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 4.229

Region-enriched R4: 3.297/0.00005

 2.543 0.867 0.961 - - - 0.715 Mlig455_024605 {REF} {Length: 3347} {RNA1509_15667} {RNA1310_7650} {RNA815_39665}
20. MligTC455_02890 22 0.45 Mlig455_066296

Neo: Germline

Age: -

 2.534 0.862 0.722 - - 0.950 - Mlig455_066296 {REF} {Length: 1535} {RNA1509_42369} {RNA1310_21266} {RNA815_29273}
21. MligTC455_23109 417 8.7 Mlig455_033954

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.492

Region-enriched R8: 3.616/0.03342

 GPD2 2.53 0.958 0.844 - - 0.728 - Mlig455_033954 {REF} {Length: 3036} {TRANSSPLICED} {Pfam: FAD dependent oxidoreductase [PF01266.26, score=169.3]; C-terminal domain of alpha-glycerophosphate oxidase [PF16901.7, score=130.4]; EF-hand domain pair [PF13499.8, score=49.4]; EF hand [PF00036.34, score=36.9]; FAD binding domain [PF00890.26, score=34.5]; FAD dependent oxidoreductase [PF12831.9, score=30.6]; EF-hand domain [PF13405.8, score=30.4]; EF hand [PF13202.8, score=23.9]; EF-hand domain pair [PF13833.8, score=21.5]; Glucose inhibited division protein A [PF01134.24, score=21.2]; FAD binding domain [PF01494.21, score=21.1]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=20.6]} {Human: ENSG00000115159, GPD2, glycerol-3-phosphate dehydrogenase 2, [RH, Score=843, Expect=0.0]} {Mouse: ENSMUSG00000026827, Gpd2, glycerol phosphate dehydrogenase 2, mitochondrial, [RH, Score=821, Expect=0.0]} {Dmel: FBgn0022160, Gpo-1, Glycerophosphate oxidase-1, [RH, Score=814, Expect=0.0]} {Celegans: WBGene00012031, T25G3.4, Probable glycerol-3-phosphate dehydrogenase, mitochondrial, [RH, Score=752, Expect=0.0]} {Smed: dd_Smed_v6_4928_0_1, dd_Smed_v6_4928_0_1, [RH, Score=812, Expect=0.0]} {RNA1509_12322, RNA1509_47633, RNA1509_6236} {RNA1310_7947, RNA1509_12322, RNA1509_47633, RNA1509_6236} {RNA1509_12322, RNA1509_47633, RNA1509_6236, RNA815_3473.1}
22. MligTC455_33993 221 4.61 Mlig455_055039, Mlig455_055058

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.710

Region-specific R4: 6.949

Regeneration-enriched R6: 6.034
Regeneration-enriched R2: 5.029

 2.494 0.972 0.768 - - - 0.754

Mlig455_055039 {REF} {Length: 4245} {RNA1509_15103} {RNA1310_4294.1} {RNA815_17182}

Mlig455_055058 {REF} {Length: 2973} {RNA1509_15103} {RNA1310_4294.1} {RNA815_35904}
23. MligTC455_03005 58 1.21 Mlig455_004257, Mlig455_004306

Neo: Germline

Age: -

 2.486 0.781 0.962 - - 0.743 -

Mlig455_004257 {REF} {Length: 330} {NoTransDecoderORF} {RNA1509_32444} {RNA1310_45150} {RNA815_10124.1}

Mlig455_004306 {REF} {Length: 257} {NoTransDecoderORF} {RNA1509_32444} {RNA1310_45150} {RNA815_10124.1}
24. MligTC455_21732 13 0.27 Mlig455_006718

Neo: -

Age: -

 1.964 0.984 0.980 - - - - Mlig455_006718 {REF} {Length: 2049} {Celegans: WBGene00015646, mlt-10, [Score=154, Expect=1e-42]} {RNA1509_8154} {RNA1310_936} {RNA815_2209}
25. MligTC455_20271 58 1.2 Mlig455_013994

Neo: Germline

Age: Up-Down-Up

 1.949 0.971 0.978 - - - - Mlig455_013994 {REF} {Length: 1947} {RNA1509_45350} {RNA1310_35055, RNA1509_45350} {RNA1509_45350, RNA815_40723}
26. MligTC455_22813 113 2.35 Mlig455_010801

Neo: Germline

Age: -

Region-specific R4: 6.068

Region-enriched R4: 5.065/0.00000

 1.945 0.982 0.963 - - - - Mlig455_010801 {REF} {Length: 875} {RNA1509_17716} {RNA1310_43674, RNA1509_17716} {RNA1509_17716, RNA815_21234}
27. MligTC455_09570 62 1.29 Mlig455_063879

Neo: -

Age: -

Region-specific R4: 7.248

Region-enriched R4: 5.809/0.00103

 1.941 0.980 0.961 - - - - Mlig455_063879 {REF} {Length: 629} {NoTransDecoderORF} {RNA1310_71536} {RNA815_39466}
28. MligTC455_05558 34 0.71 Mlig455_019821

Neo: -

Age: logFC(26M/2M)=0.687

Region-enriched R4: 5.756/0.00061

 1.933 0.963 0.970 - - - - Mlig455_019821 {REF} {Length: 1251} {NoTransDecoderORF} {RNA1310_35019} {RNA815_8697}
29. MligTC455_10100 18 0.38 Mlig455_040383

Neo: -

Age: -

 1.932 0.959 0.973 - - - - Mlig455_040383 {REF} {Length: 961} {Smed: dd_Smed_v6_1574_6_38, dd_Smed_v6_1574_6_38, [Score=62.4, Expect=1e-13]} {RNA1310_32071.1} {RNA815_13547.1}
30. MligTC455_13569 13 0.27 Mlig455_038424

Neo: Germline

Age: -

 1.931 0.958 0.973 - - - - Mlig455_038424 {REF} {Length: 603} {NoTransDecoderORF} {RNA1310_87577} {RNA815_56204}
31. MligTC455_30575 30 0.62 Mlig455_038999

Neo: -

Age: -

 1.923 0.944 - - - - 0.979 Mlig455_038999 {REF} {Length: 1377} {Pfam: PAN domain [PF00024.28, score=21.3]} {RNA1509_48973} {RNA1310_53414} {RNA815_46038}
32. MligTC455_34963 262 5.46 Mlig455_053055

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.385

Region-specific R4: 5.195

Region-enriched R4: 3.297/0.00000

 1.923 0.971 0.952 - - - - Mlig455_053055 {REF} {Length: 3067} {TRANSSPLICED} {RNA1509_12370, RNA1509_16044, RNA1509_35961, RNA1509_57992} {RNA1310_5163, RNA1509_12370, RNA1509_16044, RNA1509_35961, RNA1509_57992} {RNA1509_12370, RNA1509_16044, RNA1509_35961, RNA1509_57992, RNA815_1609.1}
33. MligTC455_53698 115 2.39 Mlig455_013373, Mlig455_054833

Neo: Germline

Age: logFC(26M/2M)=-0.811

Region-specific R4: 6.106

 1.921 0.956 0.965 - - - -

Mlig455_013373 {REF} {Length: 1376} {Pfam: THAP domain [PF05485.14, score=40.7]} {RNA1509_58410} {RNA1310_37810} {RNA815_17175}

Mlig455_054833 {REF} {Length: 318} {NoTransDecoderORF} {RNA1509_10052} {RNA1310_14804} {RNA815_8889}
34. MligTC455_52475 227 4.73 Mlig455_033051

Neo: Germline

Age: -

Region-specific R4: 5.404

Region-enriched R4: 3.504/0.00000

 1.919 0.976 0.943 - - - - Mlig455_033051 {REF} {Length: 1499} {Pfam: WSC domain [PF01822.21, score=104.8]} {RNA1509_5042} {RNA1310_14021} {RNA815_5619.1}
35. MligTC455_05974 116 2.41 Mlig455_008841, Mlig455_008942

Neo: Germline

Age: -

Region-enriched R4: 7.621/0.00997

 1.918 0.971 0.947 - - - -

Mlig455_008841 {REF} {Length: 461} {RNA1509_36144} {RNA1310_88359} {RNA815_17079.2}

Mlig455_008942 {REF} {Length: 461} {RNA1509_36144} {RNA1310_88359, RNA1509_36144} {RNA1509_36144, RNA815_17079.2}
36. MligTC455_12198 82 1.72 Mlig455_054302

Neo: Germline

Age: -

Region-specific R4: 6.290

Region-enriched R4: 3.889/0.00401

 1.915 0.946 0.969 - - - - Mlig455_054302 {REF} {Length: 1253} {RNA1509_45595} {RNA1310_55802} {RNA815_29152}
37. MligTC455_34402 48 0.99 Mlig455_053893

Neo: Irradiation

Age: -

Region-enriched R4: 4.756/0.01468

 1.913 0.925 0.988 - - - - Mlig455_053893 {REF} {Length: 1335} {NoTransDecoderORF} {RNA1509_34695} {RNA1310_32236} {RNA815_37976}
38. MligTC455_25590 1343 27.98 Mlig455_011017, Mlig455_023879, Mlig455_048596, Mlig455_048675, Mlig455_048708

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.709

Region-enriched R4: 4.476/0.00004

 IDE 1.911 0.979 0.932 - - - -

Mlig455_011017 {REF} {Length: 3461} {Pfam: Peptidase M16 inactive domain [PF05193.23, score=34.0]; Middle or third domain of peptidase_M16 [PF16187.7, score=27.7]} {Human: ENSG00000119912, IDE, insulin degrading enzyme, [Score=107, Expect=8e-24]} {Mouse: ENSMUSG00000111624, Ide, insulin degrading enzyme, [Score=105, Expect=2e-23]; ENSMUSG00000056999, Ide, insulin degrading enzyme, [Score=105, Expect=2e-23]} {Dmel: FBgn0030344, Nrd1, Nardilysin, [Score=55.8, Expect=7e-08]} {Celegans: WBGene00013492, Y70C5C.1, [Score=104, Expect=2e-23]} {RNA1509_10904} {RNA1310_4247} {RNA815_1184}

Mlig455_023879 {REF} {Length: 3403} {Pfam: Middle or third domain of peptidase_M16 [PF16187.7, score=122.7]; Peptidase M16 inactive domain [PF05193.23, score=37.7]} {Human: ENSG00000119912, IDE, insulin degrading enzyme, [Score=146, Expect=4e-35]} {Mouse: ENSMUSG00000111624, Ide, insulin degrading enzyme, [Score=140, Expect=2e-33]; ENSMUSG00000056999, Ide, insulin degrading enzyme, [Score=140, Expect=2e-33]} {Dmel: FBgn0030344, Nrd1, Nardilysin, [Score=76.3, Expect=1e-13]} {Celegans: WBGene00013492, Y70C5C.1, [Score=135, Expect=4e-32]} {RNA1509_10904} {RNA1310_4247} {RNA815_1184}

Mlig455_048596 {REF} {Length: 3170} {Pfam: Middle or third domain of peptidase_M16 [PF16187.7, score=89.0]; Peptidase M16 inactive domain [PF05193.23, score=37.7]; Insulinase (Peptidase family M16) [PF00675.22, score=18.9]} {Human: ENSG00000119912, IDE, insulin degrading enzyme, [Score=122, Expect=1e-27]} {Mouse: ENSMUSG00000111624, Ide, insulin degrading enzyme, [Score=117, Expect=4e-26]; ENSMUSG00000056999, Ide, insulin degrading enzyme, [Score=117, Expect=4e-26]} {Dmel: FBgn0037037, CG10588, [Score=51.2, Expect=5e-06]} {Celegans: WBGene00016185, C28F5.4, Putative zinc protease C28F5.4, [Score=88.2, Expect=1e-17]} {RNA1509_10904} {RNA1310_4247} {RNA815_1184}

Mlig455_048675 {REF} {Length: 3417} {Pfam: Middle or third domain of peptidase_M16 [PF16187.7, score=122.7]; Peptidase M16 inactive domain [PF05193.23, score=37.7]} {Human: ENSG00000119912, IDE, insulin degrading enzyme, [Score=147, Expect=3e-35]} {Mouse: ENSMUSG00000056999, Ide, insulin degrading enzyme, [Score=141, Expect=1e-33]; ENSMUSG00000111624, Ide, insulin degrading enzyme, [Score=141, Expect=1e-33]} {Dmel: FBgn0030344, Nrd1, Nardilysin, [Score=77.4, Expect=5e-14]} {Celegans: WBGene00013492, Y70C5C.1, [Score=135, Expect=4e-32]} {RNA1509_10904} {RNA1310_4247} {RNA815_1184}

Mlig455_048708 {REF} {Length: 3466} {Pfam: Middle or third domain of peptidase_M16 [PF16187.7, score=124.4]; Peptidase M16 inactive domain [PF05193.23, score=37.7]} {Human: ENSG00000119912, IDE, insulin degrading enzyme, [Score=146, Expect=5e-35]} {Mouse: ENSMUSG00000056999, Ide, insulin degrading enzyme, [Score=140, Expect=3e-33]; ENSMUSG00000111624, Ide, insulin degrading enzyme, [Score=140, Expect=3e-33]} {Dmel: FBgn0030344, Nrd1, Nardilysin, [Score=77.8, Expect=4e-14]} {Celegans: WBGene00013492, Y70C5C.1, [Score=135, Expect=3e-32]} {RNA1509_10904, RNA1509_24294, RNA1509_2616} {RNA1310_4247, RNA1509_24294, RNA1509_2616} {RNA1509_24294, RNA1509_2616, RNA815_1184}
39. MligTC455_10099 94 1.95 Mlig455_038684, Mlig455_038698

Neo: Germline

Age: Down-Down-Down, logFC(26M/2M)=-0.820

Region-specific R4: 6.728

Region-enriched R4: 6.187/0.00013

 1.909 0.939 0.970 - - - -

Mlig455_038684 {REF} {Length: 1407} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=26.9]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=105, Expect=4e-26]} {RNA1509_30575} {RNA1310_32071.3} {RNA815_13547.1}

Mlig455_038698 {REF} {Length: 1405} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=26.9]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=105, Expect=4e-26]} {RNA1509_30575} {RNA1310_32071.3} {RNA815_13547.1}
40. MligTC455_49242 474 9.87 Mlig455_022874

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.285

Region-specific R4: 5.891

Region-enriched R4: 3.048/0.00000

 1.908 0.981 0.927 - - - - Mlig455_022874 {REF} {Length: 2657} {Pfam: Uncharacterized protein conserved in bacteria (DUF2076) [PF09849.11, score=18.7]} {RNA1509_26629, RNA1509_31383, RNA1509_36955, RNA1509_57802, RNA1509_6217} {RNA1310_9702.1, RNA1509_26629, RNA1509_31383, RNA1509_36955, RNA1509_57802, RNA1509_6217} {RNA1509_26629, RNA1509_31383, RNA1509_36955, RNA1509_57802, RNA1509_6217, RNA815_4174}
41. MligTC455_21166 29 0.6 Mlig455_023515, Mlig455_023550

Neo: -

Age: -

 1.907 0.989 0.918 - - - -

Mlig455_023515 {REF} {Length: 707} {NoTransDecoderORF} {RNA1310_32825.1} {RNA815_38775}

Mlig455_023550 {REF} {Length: 746} {NoTransDecoderORF} {RNA1310_63680} {RNA815_38775}
42. MligTC455_24794 303 6.3 Mlig455_021633, Mlig455_021686

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.296

Region-specific R4: 7.227

Region-enriched R4: 4.321/0.00000

 1.907 0.969 0.938 - - - -

Mlig455_021633 {REF} {Length: 3836} {RNA1509_50179, RNA1509_8555} {RNA1310_2773, RNA1509_50179} {RNA1509_50179, RNA815_7241}

Mlig455_021686 {REF} {Length: 3869} {RNA1509_8555} {RNA1310_2773, RNA1509_8555} {RNA1509_8555, RNA815_7241}
43. MligTC455_26247 188 3.92 Mlig455_000904, Mlig455_056687

Neo: -

Age: -

Region-specific R4: 6.556

Region-enriched R4: 3.288/0.00515

 1.906 0.954 0.952 - - - -

Mlig455_000904 {REF} {Length: 2654} {Pfam: Retrotransposon gag protein [PF03732.19, score=21.6]} {RNA1509_42532} {RNA1310_13513.1} {RNA815_11366.1}

Mlig455_056687 {REF} {Length: 2662} {Pfam: Retrotransposon gag protein [PF03732.19, score=21.6]} {RNA1509_42532, RNA1509_54014} {RNA1310_13513.1, RNA1509_54014} {RNA1509_54014, RNA815_11366.1}
44. MligTC455_27574 46 0.97 Mlig455_006577

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.578

 1.905 0.940 0.965 - - - - Mlig455_006577 {REF} {Length: 1966} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=63.7]} {Dmel: FBgn0035458, ppk27, pickpocket 27, [Score=46.2, Expect=1e-05]} {Celegans: WBGene00012137, asic-2, Degenerin-like protein asic-2, [Score=48.1, Expect=2e-06]} {Smed: dd_Smed_v6_15195_0_1, dd_Smed_v6_15195_0_1, [Score=69.7, Expect=1e-13]} {RNA1509_13722, RNA1509_18185, RNA1509_36956} {RNA1310_12232.1, RNA1509_13722, RNA1509_18185} {RNA1509_13722, RNA1509_18185, RNA815_4577.1}
45. MligTC455_32272 205 4.28 Mlig455_038695

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.515

Region-enriched R4: 2.260/0.01378

 ABCA8 1.904 0.964 0.940 - - - - Mlig455_038695 {REF} {Length: 5322} {Pfam: ABC transporter [PF00005.29, score=175.7]; ABC-2 family transporter protein [PF12698.9, score=74.7]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=69.3]; RecF/RecN/SMC N terminal domain [PF02463.21, score=33.0]; AAA domain [PF13476.8, score=23.3]; AAA ATPase domain [PF13191.8, score=22.5]; RsgA GTPase [PF03193.18, score=21.0]; AAA domain [PF13401.8, score=19.3]; AAA ATPase domain [PF13175.8, score=18.8]} {Human: ENSG00000141338, ABCA8, ATP binding cassette subfamily A member 8, [Score=220, Expect=4e-57]; ENSG00000154265, ABCA5, ATP binding cassette subfamily A member 5, [Score=220, Expect=4e-58]; ENSG00000154263, ABCA10, ATP binding cassette subfamily A member 10, [Score=215, Expect=1e-55]} {Mouse: ENSMUSG00000018800, Abca5, ATP-binding cassette, sub-family A (ABC1), member 5, [Score=218, Expect=1e-56]; ENSMUSG00000041828, Abca8a, ATP-binding cassette, sub-family A (ABC1), member 8a, [Score=211, Expect=2e-54]; ENSMUSG00000041797, Abca9, ATP-binding cassette, sub-family A (ABC1), member 9, [Score=209, Expect=6e-54]} {Dmel: FBgn0031170, CG1718, [Score=185, Expect=2e-46]} {Celegans: WBGene00000022, abt-4, ABC Transporter family, [Score=200, Expect=3e-51]} {Smed: dd_Smed_v6_2300_0_9, dd_Smed_v6_2300_0_9, [Score=208, Expect=4e-54]} {RNA1509_27825} {RNA1310_1329, RNA1509_27825} {RNA1509_27825, RNA815_4723}
46. MligTC455_14681 354 7.38 Mlig455_039610

Neo: Irradiation

Age: Up-Down-Up

Region-specific R4: 5.889

Region-enriched R4: 3.229/0.02310

 1.903 0.969 0.934 - - - - Mlig455_039610 {REF} {Length: 848} {RNA1509_10622} {RNA1310_47546} {RNA815_23842}
47. MligTC455_21167 27 0.55 Mlig455_023614

Neo: -

Age: -

Region-enriched R4: 5.671/0.02665

 1.903 0.986 0.917 - - - - Mlig455_023614 {REF} {Length: 744} {NoTransDecoderORF} {RNA1310_63680} {RNA815_38775}
48. MligTC455_05293 44 0.91 Mlig455_016323

Neo: -

Age: -

 1.902 0.969 0.933 - - - - Mlig455_016323 {REF} {Length: 732} {NoTransDecoderORF} {RNA1509_48191} {RNA1310_47921} {RNA815_39328}
49. MligTC455_36080 29 0.61 Mlig455_045805, Mlig455_063180

Neo: -

Age: -

 1.902 0.937 0.965 - - - -

Mlig455_045805 {REF} {Length: 1469} {RNA1310_56480.2} {RNA815_34810}

Mlig455_063180 {REF} {Length: 365} {RNA1310_32344} {RNA815_34810}
50. MligTC455_06953 256 5.32 Mlig455_033854, Mlig455_033869

Neo: Germline

Age: -

Region-specific R4: 6.199

Region-enriched R4: 4.220/0.00001

 1.9 0.971 0.929 - - - -

Mlig455_033854 {REF} {Length: 472} {RNA1509_39205} {RNA1310_91393} {RNA815_51514}

Mlig455_033869 {REF} {Length: 879} {RNA1509_39205} {RNA1310_91393, RNA1509_39205} {RNA1509_39205, RNA815_51514}
51. MligTC455_02154 8 0.16 Mlig455_000640

Neo: Irradiation

Age: Up-Down-Down

 TTC17 1.899 0.957 0.942 - - - - Mlig455_000640 {REF} {Length: 3975} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=35.8]; Tetratricopeptide repeat [PF00515.30, score=33.6]; Tetratricopeptide repeat [PF13176.8, score=29.2]; Tetratricopeptide repeat [PF13424.8, score=23.7]; TPR repeat [PF13414.8, score=21.7]} {Human: ENSG00000052841, TTC17, tetratricopeptide repeat domain 17, [RH, Score=159, Expect=5e-39]} {Mouse: ENSMUSG00000027194, Ttc17, tetratricopeptide repeat domain 17, [RH, Score=160, Expect=2e-39]} {Dmel: FBgn0029713, CG11436, [RH, Score=62.8, Expect=1e-09]} {Celegans: WBGene00020553, T19A5.1, [RH, Score=57.0, Expect=9e-08]} {Smed: dd_Smed_v6_11405_0_1, dd_Smed_v6_11405_0_1, [RH, Score=258, Expect=5e-71]} {RNA1509_10619, RNA1509_58302} {RNA1310_1270.1, RNA1509_10619, RNA1509_58302} {RNA1509_10619, RNA1509_58302, RNA815_24250}
52. MligTC455_05865 77 1.6 Mlig455_019309, Mlig455_019530, Mlig455_021054

Neo: -

Age: -

 1.899 0.933 0.966 - - - -

Mlig455_019309 {REF} {Length: 741} {RNA1509_45948} {RNA1310_18762.2} {RNA815_13811}

Mlig455_019530 {REF} {Length: 802} {RNA1509_45948} {RNA1310_18762.1} {RNA815_13811}

Mlig455_021054 {REF} {Length: 762} {RNA1509_45948} {RNA1310_18762.2, RNA1509_45948} {RNA1509_45948, RNA815_13811}
53. MligTC455_19479 43 0.89 Mlig455_003886

Neo: Germline

Age: -

Region-specific R4: 6.585

Region-enriched R4: 4.389/0.00392

 1.899 0.976 0.923 - - - - Mlig455_003886 {REF} {Length: 808} {RNA1509_18170} {RNA1310_50142} {RNA815_25360}
54. MligTC455_21116 188 3.91 Mlig455_033054, Mlig455_044111

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.375

Region-enriched R4: 3.680/0.00000

 1.899 0.965 0.934 - - - -

Mlig455_033054 {REF} {Length: 2588} {Pfam: WSC domain [PF01822.21, score=62.4]} {RNA1509_24205} {RNA1310_33564.1} {RNA815_39383}

Mlig455_044111 {REF} {Length: 2261} {Pfam: WSC domain [PF01822.21, score=35.7]} {RNA1509_24205} {RNA1310_33564.1} {RNA815_39383}
55. MligTC455_04518 18 0.38 Mlig455_029869

Neo: Germline

Age: -

 1.898 0.950 0.948 - - - - Mlig455_029869 {REF} {Length: 463} {RNA1509_54738} {RNA1310_89291} {RNA815_46717}
56. MligTC455_20597 327 6.82 Mlig455_010434, Mlig455_070912

Neo: Germline

Age: -

Region-specific R4: 6.568

 1.898 0.950 0.948 - - - -

Mlig455_010434 {REF} {Length: 1107} {RNA1509_21361, RNA1509_36699} {RNA1310_30953, RNA1509_21361, RNA1509_36699} {RNA1509_21361, RNA1509_36699, RNA815_17410}

Mlig455_070912 {REF} {Length: 1104} {RNA1509_21361, RNA1509_56430} {RNA1310_30953, RNA1509_56430} {RNA1509_56430, RNA815_17410}
57. MligTC455_54173 117 2.44 Mlig455_033140

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.139

 1.898 0.956 0.942 - - - - Mlig455_033140 {REF} {Length: 2614} {RNA1509_21301, RNA1509_22305, RNA1509_36694} {RNA1310_14403, RNA1509_22305, RNA1509_36694} {RNA1509_22305, RNA1509_36694, RNA815_5347}
58. MligTC455_21165 25 0.53 Mlig455_023506

Neo: -

Age: -

 1.897 0.988 0.909 - - - - Mlig455_023506 {REF} {Length: 512} {RNA1310_63680} {RNA815_38775}
59. MligTC455_38610 362 7.54 Mlig455_047153, Mlig455_047229, Mlig455_047239, Mlig455_047296

Neo: Germline

Age: Up-Down-Up

Region-enriched R4: 6.287/0.00002

 1.897 0.976 0.921 - - - -

Mlig455_047153 {REF} {Length: 888} {RNA1509_37959} {RNA1310_11667.2} {RNA815_25551}

Mlig455_047229 {REF} {Length: 856} {RNA1509_37959} {RNA1310_11667.2} {RNA815_25551}

Mlig455_047239 {REF} {Length: 4434} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=86.5]} {Smed: dd_Smed_v6_13734_0_18, dd_Smed_v6_13734_0_18, [Score=68.2, Expect=4e-12]} {RNA1509_37959} {RNA1310_11667.2} {RNA815_25551}

Mlig455_047296 {REF} {Length: 4115} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=84.2]; Endonuclease-reverse transcriptase [PF14529.8, score=48.2]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=27.5]} {Smed: dd_Smed_v6_13734_0_20, dd_Smed_v6_13734_0_20, [Score=68.2, Expect=8e-12]} {RNA1509_37959} {RNA1310_11667.2} {RNA815_25551}
60. MligTC455_10011 57 1.19 Mlig455_035695, Mlig455_035789

Neo: -

Age: Down-Down-Up

Region-enriched R4: 5.860/0.00791

 1.896 0.945 0.951 - - - -

Mlig455_035695 {REF} {Length: 1462} {RNA1509_59374} {RNA1310_38389} {RNA815_25965}

Mlig455_035789 {REF} {Length: 1216} {RNA1310_38389} {RNA815_25965}
61. MligTC455_26140 53 1.11 Mlig455_009901, Mlig455_009903

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 4.764/0.00706

 1.896 0.951 0.945 - - - -

Mlig455_009901 {REF} {Length: 1856} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=58.9]; Capsular polysaccharide synthesis protein [PF05704.14, score=19.0]} {Smed: dd_Smed_v6_6819_0_2, dd_Smed_v6_6819_0_2, [Score=129, Expect=1e-34]} {RNA1509_29382} {RNA1310_7201} {RNA815_5886.2}

Mlig455_009903 {REF} {Length: 1723} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=58.9]; Capsular polysaccharide synthesis protein [PF05704.14, score=19.0]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=129, Expect=9e-35]} {RNA1509_29382} {RNA1310_7201} {RNA815_5886.2}
62. MligTC455_31443 223 4.65 Mlig455_051505

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.613

 PDE7A 1.896 0.972 0.924 - - - - Mlig455_051505 {REF} {Length: 2631} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=171.1]} {Human: ENSG00000205268, PDE7A, phosphodiesterase 7A, [Score=140, Expect=9e-36]; ENSG00000171408, PDE7B, phosphodiesterase 7B, [Score=137, Expect=2e-34]} {Mouse: ENSMUSG00000019990, Pde7b, phosphodiesterase 7B, [Score=140, Expect=4e-36]; ENSMUSG00000069094, Pde7a, phosphodiesterase 7A, [Score=139, Expect=2e-35]} {Dmel: FBgn0000479, dnc, dunce, [Score=117, Expect=2e-27]} {Celegans: WBGene00020114, pde-4, Probable 3',5'-cyclic phosphodiesterase pde-4, [Score=107, Expect=2e-24]} {Smed: dd_Smed_v6_20355_0_1, dd_Smed_v6_20355_0_1, [Score=161, Expect=1e-44]} {RNA1509_7223} {RNA1310_12032.1} {RNA815_6602.1}
63. MligTC455_35604 732 15.25 Mlig455_028061

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 2.953

Region-enriched R4: 2.494/0.00000

Regeneration-downregulated R4: -1.963

Regeneration-depleted R4: -1.963

 GRIK2 1.896 0.982 0.914 - - - - Mlig455_028061 {REF} {Length: 4412} {Pfam: Ligand-gated ion channel [PF00060.28, score=162.4]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=101.7]; Receptor family ligand binding region [PF01094.30, score=89.3]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=72.1]} {Human: ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=481, Expect=4e-154]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=470, Expect=2e-149]; ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=469, Expect=3e-149]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=479, Expect=4e-153]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=469, Expect=2e-149]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=466, Expect=7e-148]} {Dmel: FBgn0039927, CG11155, [Score=485, Expect=2e-155]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=360, Expect=1e-109]} {Smed: dd_Smed_v6_8816_0_1, dd_Smed_v6_8816_0_1, [Score=429, Expect=2e-133]} {RNA1509_22809} {RNA1310_11160, RNA1509_22809} {RNA1509_22809, RNA815_7458}
64. MligTC455_40404 1544 32.17 Mlig455_037189, Mlig455_052341

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.361

Region-specific R4: 5.686

Region-enriched R4: 2.896/0.00005

Regeneration-depleted R3: -3.619
Regeneration-depleted R4: -2.810

 ATP1A1 1.896 0.955 0.941 - - - -

Mlig455_037189 {REF} {Length: 3176} {Pfam: E1-E2 ATPase [PF00122.22, score=149.4]; Cation transport ATPase (P-type) [PF13246.8, score=65.5]; Cation transporter/ATPase, N-terminus [PF00690.28, score=61.9]} {Human: ENSG00000163399, ATP1A1, ATPase Na+/K+ transporting subunit alpha 1, [Score=639, Expect=0.0]; ENSG00000018625, ATP1A2, ATPase Na+/K+ transporting subunit alpha 2, [Score=632, Expect=0.0]; ENSG00000105409, ATP1A3, ATPase Na+/K+ transporting subunit alpha 3, [Score=624, Expect=0.0]; ENSG00000285505, AC010616.2, novel protein, ATP1A3-RABAC1 readthrough, [Score=622, Expect=0.0]} {Mouse: ENSMUSG00000033161, Atp1a1, ATPase, Na+/K+ transporting, alpha 1 polypeptide, [Score=640, Expect=0.0]; ENSMUSG00000007097, Atp1a2, ATPase, Na+/K+ transporting, alpha 2 polypeptide, [Score=631, Expect=0.0]; ENSMUSG00000040907, Atp1a3, ATPase, Na+/K+ transporting, alpha 3 polypeptide, [Score=622, Expect=0.0]} {Dmel: FBgn0002921, Atpalpha, Na pump alpha subunit, [Score=647, Expect=0.0]} {Celegans: WBGene00001137, eat-6, Sodium/potassium-transporting ATPase subunit alpha, [Score=624, Expect=0.0]} {Smed: dd_Smed_v6_1179_0_1, dd_Smed_v6_1179_0_1, [Score=629, Expect=0.0]} {RNA1509_956} {RNA1310_3602} {RNA815_817}

Mlig455_052341 {REF} {Length: 3536} {TRANSSPLICED} {Pfam: E1-E2 ATPase [PF00122.22, score=148.0]; Cation transporting ATPase, C-terminus [PF00689.23, score=132.7]; Cation transporter/ATPase, N-terminus [PF00690.28, score=70.0]; haloacid dehalogenase-like hydrolase [PF00702.28, score=65.8]; Cation transport ATPase (P-type) [PF13246.8, score=64.1]; haloacid dehalogenase-like hydrolase [PF08282.14, score=23.4]} {Human: ENSG00000163399, ATP1A1, ATPase Na+/K+ transporting subunit alpha 1, [Score=1271, Expect=0.0]; ENSG00000018625, ATP1A2, ATPase Na+/K+ transporting subunit alpha 2, [Score=1270, Expect=0.0]; ENSG00000105409, ATP1A3, ATPase Na+/K+ transporting subunit alpha 3, [Score=1255, Expect=0.0]; ENSG00000285505, AC010616.2, novel protein, ATP1A3-RABAC1 readthrough, [Score=1243, Expect=0.0]} {Mouse: ENSMUSG00000033161, Atp1a1, ATPase, Na+/K+ transporting, alpha 1 polypeptide, [Score=1275, Expect=0.0]; ENSMUSG00000007097, Atp1a2, ATPase, Na+/K+ transporting, alpha 2 polypeptide, [Score=1271, Expect=0.0]; ENSMUSG00000040907, Atp1a3, ATPase, Na+/K+ transporting, alpha 3 polypeptide, [Score=1254, Expect=0.0]; ENSMUSG00000007107, Atp1a4, ATPase, Na+/K+ transporting, alpha 4 polypeptide, [Score=1229, Expect=0.0]} {Dmel: FBgn0002921, Atpalpha, Na pump alpha subunit, [Score=1293, Expect=0.0]} {Celegans: WBGene00001137, eat-6, Sodium/potassium-transporting ATPase subunit alpha, [Score=1273, Expect=0.0]} {Smed: dd_Smed_v6_1179_0_1, dd_Smed_v6_1179_0_1, [Score=1269, Expect=0.0]} {RNA1509_56642, RNA1509_956} {RNA1310_3602, RNA1509_56642, RNA1509_956} {RNA1509_56642, RNA1509_956, RNA815_817}
65. MligTC455_14732 138 2.89 Mlig455_030404

Neo: Germline

Age: -

Region-specific R4: 4.650

Region-enriched R4: 2.904/0.00100

 1.895 0.962 0.933 - - - - Mlig455_030404 {REF} {Length: 1299} {RNA1509_11718} {RNA1310_48901} {RNA815_45231}
66. MligTC455_30896 155 3.22 Mlig455_039820

Neo: Irradiation

Age: -

Region-specific R4: 6.798

 1.895 0.971 0.924 - - - - Mlig455_039820 {REF} {Length: 3694} {RNA1509_3858} {RNA1310_928.1} {RNA815_529.1}
67. MligTC455_06212 40 0.84 Mlig455_060579

Neo: Germline

Age: Up-Down-Up

Region-enriched R4: 5.420/0.00393

 1.893 0.959 0.934 - - - - Mlig455_060579 {REF} {Length: 1326} {RNA1509_48102} {RNA1310_24234.1, RNA1509_48102} {RNA1509_48102, RNA815_9984}
68. MligTC455_14861 193 4.01 Mlig455_021554, Mlig455_021557

Neo: Germline

Age: -

Region-specific R4: 7.221

Region-enriched R4: 4.716/0.00120

 1.892 0.939 0.953 - - - -

Mlig455_021554 {REF} {Length: 520} {RNA1509_26247} {RNA1310_87848} {RNA815_45821}

Mlig455_021557 {REF} {Length: 526} {RNA1509_26247} {RNA1310_87848, RNA1509_26247} {RNA1509_26247, RNA815_45821}
69. MligTC455_50049 291 6.06 Mlig455_030763

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.826

Region-enriched R4: 3.092/0.00052

 RAB12 1.892 0.940 0.952 - - - - Mlig455_030763 {REF} {Length: 1725} {Pfam: Ras family [PF00071.24, score=58.1]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=57.3]; 50S ribosome-binding GTPase [PF01926.25, score=21.3]; ADP-ribosylation factor family [PF00025.23, score=20.6]} {Human: ENSG00000206418, RAB12, RAB12, member RAS oncogene family, [Score=61.6, Expect=3e-10]; ENSG00000267261, AC099811.2, novel protein, [Score=59.7, Expect=8e-10]} {Mouse: ENSMUSG00000023460, Rab12, RAB12, member RAS oncogene family, [Score=59.3, Expect=8e-10]; ENSMUSG00000019173, Rab5c, RAB5C, member RAS oncogene family, [Score=57.0, Expect=3e-09]} {Dmel: FBgn0015797, Rab6, [Score=61.2, Expect=6e-11]} {Celegans: WBGene00004281, rab-28, RAB family, [Score=65.5, Expect=2e-12]} {Smed: dd_Smed_v6_3370_0_1, dd_Smed_v6_3370_0_1, [Score=70.1, Expect=3e-14]} {RNA1509_18190} {RNA1310_18285} {RNA815_6420}
70. MligTC455_20930 750 15.63 Mlig455_011808

Neo: -

Age: -

Region-specific R4: 5.889

Region-enriched R4: 4.555/0.00000

 1.891 0.965 0.926 - - - - Mlig455_011808 {REF} {Length: 1795} {RNA1509_2086} {RNA1310_29667} {RNA815_14169}
71. MligTC455_22261 210 4.39 Mlig455_045581

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.819

Region-enriched R4: 3.801/0.00012

 1.89 0.937 0.953 - - - - Mlig455_045581 {REF} {Length: 2273} {TRANSSPLICED} {RNA1509_16939, RNA1509_50321} {RNA1310_6791.1, RNA1509_16939, RNA1509_50321} {RNA1509_16939, RNA1509_50321, RNA815_4816.1}
72. MligTC455_07703 57 1.19 Mlig455_061822

Neo: Germline

Age: -

 1.889 0.916 0.973 - - - - Mlig455_061822 {REF} {Length: 545} {RNA1509_42781} {RNA1310_53468.1, RNA1509_42781} {RNA1509_42781, RNA815_41884}
73. MligTC455_13613 133 2.77 Mlig455_047175, Mlig455_048504

Neo: Germline

Age: Up-Down-Down

 1.889 0.934 0.955 - - - -

Mlig455_047175 {REF} {Length: 967} {RNA1310_43089} {RNA815_23666}

Mlig455_048504 {REF} {Length: 949} {RNA1310_43089} {RNA815_23666}
74. MligTC455_23128 1670 34.79 Mlig455_043441, Mlig455_043586

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.771

Region-enriched R4: 2.801/0.00000
Region-enriched R7: 1.758/0.04797

 COL6A5 1.889 0.956 0.933 - - - -

Mlig455_043441 {REF} {Length: 2587} {Pfam: von Willebrand factor type A domain [PF00092.30, score=150.1]; von Willebrand factor type A domain [PF13519.8, score=75.9]; von Willebrand factor type A domain [PF13768.8, score=35.1]} {Human: ENSG00000172752, COL6A5, collagen type VI alpha 5 chain, [Score=69.7, Expect=1e-11]} {Mouse: ENSMUSG00000032243, Itga11, integrin alpha 11, [RH, Score=60.8, Expect=4e-09]} {Celegans: WBGene00015865, C16E9.1, [RH, Score=61.2, Expect=1e-09]} {Smed: dd_Smed_v6_4428_0_1, dd_Smed_v6_4428_0_1, [Score=75.5, Expect=6e-14]} {RNA1509_18127, RNA1509_2042, RNA1509_48045, RNA1509_52683} {RNA1310_9043, RNA1509_18127, RNA1509_2042, RNA1509_48045, RNA1509_52683} {RNA1509_18127, RNA1509_2042, RNA1509_48045, RNA1509_52683, RNA815_6712}

Mlig455_043586 {REF} {Length: 2620} {Pfam: von Willebrand factor type A domain [PF00092.30, score=150.3]; von Willebrand factor type A domain [PF13519.8, score=75.9]; von Willebrand factor type A domain [PF13768.8, score=33.3]} {Human: ENSG00000172752, COL6A5, collagen type VI alpha 5 chain, [Score=69.7, Expect=1e-11]} {Mouse: ENSMUSG00000032243, Itga11, integrin alpha 11, [RH, Score=60.8, Expect=4e-09]} {Celegans: WBGene00015865, C16E9.1, [RH, Score=61.2, Expect=1e-09]} {Smed: dd_Smed_v6_4428_0_1, dd_Smed_v6_4428_0_1, [Score=77.0, Expect=2e-14]} {RNA1509_14201, RNA1509_2042} {RNA1310_9043, RNA1509_14201} {RNA1509_14201, RNA815_6712}
75. MligTC455_08451 610 12.7 Mlig455_040784, Mlig455_040837, Mlig455_064619

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 4.649/0.00050

 ITSN1 1.888 0.932 0.956 - - - -

Mlig455_040784 {REF} {Length: 3690} {Pfam: RhoGEF domain [PF00621.22, score=86.4]} {Human: ENSG00000205726, ITSN1, intersectin 1, [Score=73.2, Expect=9e-13]; ENSG00000146426, TIAM2, T cell lymphoma invasion and metastasis 2, [Score=70.5, Expect=6e-12]} {Mouse: ENSMUSG00000022957, Itsn1, intersectin 1 (SH3 domain protein 1A), [Score=73.2, Expect=2e-13]; ENSMUSG00000023800, Tiam2, T cell lymphoma invasion and metastasis 2, [Score=71.2, Expect=3e-12]} {Dmel: FBgn0035574, RhoGEF64C, Rho guanine nucleotide exchange factor at 64C, [Score=135, Expect=1e-32]} {Celegans: WBGene00006468, rhgf-1, RHo Guanine nucleotide exchange Factor, [Score=61.6, Expect=1e-09]} {Smed: dd_Smed_v6_2922_0_1, dd_Smed_v6_2922_0_1, [Score=60.5, Expect=3e-09]} {RNA1509_22763} {RNA1310_48876} {RNA815_25180}

Mlig455_040837 {REF} {Length: 489} {NoTransDecoderORF} {RNA1509_22763} {RNA1310_48876} {RNA815_25180}

Mlig455_064619 {REF} {Length: 555} {RNA1509_22763} {RNA1310_48876, RNA1509_22763} {RNA1509_22763, RNA815_25180}
76. MligTC455_34860 960 19.99 Mlig455_004529, Mlig455_028529

Neo: Germline

Age: -

Region-specific R4: 5.472

Region-enriched R4: 4.384/0.00000

 1.886 0.963 0.923 - - - -

Mlig455_004529 {REF} {Length: 797} {RNA1509_9538} {RNA1310_47064} {RNA815_25482}

Mlig455_028529 {REF} {Length: 3090} {RNA1509_9538} {RNA1310_47064} {RNA815_25482}
77. MligTC455_16187 53 1.11 Mlig455_009633

Neo: Irradiation

Age: -

 1.885 0.953 0.932 - - - - Mlig455_009633 {REF} {Length: 1449} {RNA1509_54440} {RNA1310_47805} {RNA815_24332}
78. MligTC455_20590 333 6.95 Mlig455_011663, Mlig455_049924

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.447

Region-specific R4: 6.602

Region-enriched R4: 3.679/0.00006

 1.885 0.966 0.919 - - - -

Mlig455_011663 {REF} {Length: 3326} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=19.7]} {RNA1509_16168} {RNA1310_7446.1} {RNA815_20506}

Mlig455_049924 {REF} {Length: 3338} {RNA1509_16168, RNA1509_28346} {RNA1310_7446.1, RNA1509_16168, RNA1509_28346} {RNA1509_16168, RNA1509_28346, RNA815_20506}
79. MligTC455_24119 132 2.75 Mlig455_040160

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.022

 KREMEN2 1.884 0.930 0.954 - - - - Mlig455_040160 {REF} {Length: 2105} {Pfam: WSC domain [PF01822.21, score=44.9]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=53.5, Expect=1e-08]} {Mouse: ENSMUSG00000040680, Kremen2, kringle containing transmembrane protein 2, [Score=51.2, Expect=6e-08]} {RNA1509_22379, RNA1509_32378, RNA1509_52786, RNA1509_54993} {RNA1310_23240, RNA1509_22379, RNA1509_32378, RNA1509_52786, RNA1509_54993} {RNA1509_22379, RNA1509_32378, RNA1509_52786, RNA1509_54993, RNA815_20861}
80. MligTC455_38116 140 2.91 Mlig455_052118

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.440

 PIGW 1.884 0.921 0.963 - - - - Mlig455_052118 {REF} {Length: 1813} {Pfam: GWT1 [PF06423.14, score=78.1]} {Human: ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=85.9, Expect=3e-17]; ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=85.9, Expect=3e-17]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=94.0, Expect=6e-20]} {Dmel: FBgn0031422, PIG-Wa, Phosphatidylinositol glycan anchor biosynthesis class W a, [Score=108, Expect=6e-25]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=77.0, Expect=8e-15]} {Smed: dd_Smed_v6_14190_0_1, dd_Smed_v6_14190_0_1, [Score=103, Expect=1e-23]} {RNA1509_29513, RNA1509_30379} {RNA1310_15542.1, RNA1509_29513, RNA1509_30379} {RNA1509_29513, RNA1509_30379, RNA815_5765}
81. MligTC455_03768 92 1.92 Mlig455_033614, Mlig455_033615, Mlig455_033716, Mlig455_050114

Neo: Germline

Age: -

 1.883 0.984 0.899 - - - -

Mlig455_033614 {REF} {Length: 465} {Dmel: FBgn0051626, CG31626, [Score=45.8, Expect=2e-06]}

Mlig455_033615 {REF} {Length: 1140} {RNA1310_67327} {RNA815_40796}

Mlig455_033716 {REF} {Length: 2572} {RNA1310_67327} {RNA815_40796}

Mlig455_050114 {REF} {Length: 1740} {RNA1310_67327} {RNA815_40796}
82. MligTC455_21104 474 9.87 Mlig455_033050, Mlig455_044108

Neo: Germline

Age: -

Region-specific R4: 6.422

Region-enriched R4: 4.217/0.00098

 1.882 0.989 0.893 - - - -

Mlig455_033050 {REF} {Length: 1279} {RNA1509_52743} {RNA1310_48254.1} {RNA815_26651}

Mlig455_044108 {REF} {Length: 1967} {RNA1509_32468, RNA1509_52743} {RNA1310_48254.1, RNA1509_32468, RNA1509_52743} {RNA1509_32468, RNA1509_52743, RNA815_26651}
83. MligTC455_28303 604 12.58 Mlig455_012234, Mlig455_051244, Mlig455_051260

Neo: Int S/G2/M

Age: Up-Down-Down

Region-specific R4: 6.280

 1.882 0.970 0.912 - - - -

Mlig455_012234 {REF} {Length: 1568} {RNA1509_3858} {RNA1310_928.1} {RNA815_529.1}

Mlig455_051244 {REF} {Length: 1452} {RNA1509_51631} {RNA1310_928.1} {RNA815_529.1}

Mlig455_051260 {REF} {Length: 962} {NoTransDecoderORF} {RNA1509_51631} {RNA1310_928.1} {RNA815_529.1}
84. MligTC455_10867 57 1.18 Mlig455_046891

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 5.521/0.00948

 1.881 0.903 0.978 - - - - Mlig455_046891 {REF} {Length: 2746} {RNA1509_42777} {RNA1310_7703.1, RNA1509_42777} {RNA1509_42777, RNA815_8578}
85. MligTC455_15675 579 12.07 Mlig455_038724, Mlig455_068418

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.399

Region-enriched R4: 5.037/0.00000

 1.881 0.977 0.904 - - - -

Mlig455_038724 {REF} {Length: 1400} {RNA1509_7352} {RNA1310_23077} {RNA815_2959}

Mlig455_068418 {REF} {Length: 1484} {RNA1509_7352} {RNA1310_23077, RNA1509_7352} {RNA1509_7352, RNA815_2959}
86. MligTC455_17216 1278 26.64 Mlig455_021345

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.932

Region-enriched R7: 2.103/0.03048
Region-enriched R4: 2.010/0.01109

 COL22A1 1.881 0.977 0.904 - - - - Mlig455_021345 {REF} {Length: 2460} {Pfam: von Willebrand factor type A domain [PF00092.30, score=131.0]; von Willebrand factor type A domain [PF13519.8, score=64.3]} {Human: ENSG00000169436, COL22A1, collagen type XXII alpha 1 chain, [Score=50.4, Expect=1e-05]; ENSG00000142173, COL6A2, collagen type VI alpha 2 chain, [Score=50.4, Expect=9e-06]} {Celegans: WBGene00000853, cut-6, CUTiclin, [Score=54.7, Expect=2e-07]} {RNA1509_50350} {RNA1310_8033} {RNA815_3154.1}
87. MligTC455_49597 2885 60.11 Mlig455_026031, Mlig455_043196, Mlig455_050843

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.256

Region-enriched R4: 4.217/0.00000

Regeneration-depleted R3: -5.811
Regeneration-depleted BL: -4.933
Regeneration-depleted R5: -3.300
Regeneration-depleted R4: -3.277

 PRDX1 1.881 0.952 0.929 - - - -

Mlig455_026031 {REF} {Length: 1094} {Pfam: AhpC/TSA family [PF00578.23, score=40.3]; C-terminal domain of 1-Cys peroxiredoxin [PF10417.11, score=40.3]; Redoxin [PF08534.12, score=24.6]} {Human: ENSG00000117450, PRDX1, peroxiredoxin 1, [Score=98.6, Expect=4e-25]; ENSG00000123131, PRDX4, peroxiredoxin 4, [Score=97.8, Expect=3e-24]; ENSG00000167815, PRDX2, peroxiredoxin 2, [Score=96.7, Expect=2e-24]} {Mouse: ENSMUSG00000028691, Prdx1, peroxiredoxin 1, [Score=99.4, Expect=1e-25]; ENSMUSG00000025289, Prdx4, peroxiredoxin 4, [Score=98.6, Expect=1e-24]; ENSMUSG00000005161, Prdx2, peroxiredoxin 2, [Score=98.2, Expect=3e-25]} {Dmel: FBgn0040308, Jafrac2, Thioredoxin peroxidase 2, [Score=100, Expect=9e-26]} {Celegans: WBGene00006434, prdx-2, PeRoxireDoXin, [Score=91.3, Expect=7e-23]} {Smed: dd_Smed_v6_3414_0_1, dd_Smed_v6_3414_0_1, [Score=104, Expect=1e-27]} {RNA1509_2944, RNA1509_48706, RNA1509_54547} {RNA1310_36127, RNA1509_2944, RNA1509_48706, RNA1509_54547} {RNA1509_2944, RNA1509_48706, RNA1509_54547, RNA815_17770}

Mlig455_043196 {REF} {Length: 966} {Pfam: AhpC/TSA family [PF00578.23, score=40.6]; C-terminal domain of 1-Cys peroxiredoxin [PF10417.11, score=40.3]; Redoxin [PF08534.12, score=25.6]} {Human: ENSG00000117450, PRDX1, peroxiredoxin 1, [Score=99.0, Expect=2e-25]; ENSG00000123131, PRDX4, peroxiredoxin 4, [Score=98.6, Expect=2e-24]; ENSG00000167815, PRDX2, peroxiredoxin 2, [Score=97.4, Expect=9e-25]} {Mouse: ENSMUSG00000028691, Prdx1, peroxiredoxin 1, [Score=99.8, Expect=8e-26]; ENSMUSG00000005161, Prdx2, peroxiredoxin 2, [Score=99.4, Expect=1e-25]; ENSMUSG00000025289, Prdx4, peroxiredoxin 4, [Score=99.0, Expect=8e-25]} {Dmel: FBgn0040308, Jafrac2, Thioredoxin peroxidase 2, [Score=100, Expect=6e-26]} {Celegans: WBGene00006434, prdx-2, PeRoxireDoXin, [Score=93.2, Expect=1e-23]} {Smed: dd_Smed_v6_3414_0_1, dd_Smed_v6_3414_0_1, [Score=105, Expect=5e-28]} {RNA1509_2944} {RNA1310_36127} {RNA815_17770}

Mlig455_050843 {REF} {Length: 1006} {Pfam: AhpC/TSA family [PF00578.23, score=40.3]; C-terminal domain of 1-Cys peroxiredoxin [PF10417.11, score=40.3]; Redoxin [PF08534.12, score=24.6]} {Human: ENSG00000117450, PRDX1, peroxiredoxin 1, [Score=98.6, Expect=4e-25]; ENSG00000123131, PRDX4, peroxiredoxin 4, [Score=97.8, Expect=3e-24]; ENSG00000167815, PRDX2, peroxiredoxin 2, [Score=96.7, Expect=2e-24]} {Mouse: ENSMUSG00000028691, Prdx1, peroxiredoxin 1, [Score=99.4, Expect=1e-25]; ENSMUSG00000025289, Prdx4, peroxiredoxin 4, [Score=98.6, Expect=1e-24]; ENSMUSG00000005161, Prdx2, peroxiredoxin 2, [Score=98.2, Expect=3e-25]} {Dmel: FBgn0040308, Jafrac2, Thioredoxin peroxidase 2, [Score=100, Expect=9e-26]} {Celegans: WBGene00006434, prdx-2, PeRoxireDoXin, [Score=91.3, Expect=7e-23]} {Smed: dd_Smed_v6_3414_0_1, dd_Smed_v6_3414_0_1, [Score=104, Expect=1e-27]} {RNA1509_44635, RNA1509_54547} {RNA1310_36127, RNA1509_44635} {RNA1509_44635, RNA815_17770}
88. MligTC455_33581 516 10.74 Mlig455_054692

Neo: Irradiation

Age: Up-Up-Down, logFC(26M/2M)=0.756

Region-specific R4: 3.933

Region-enriched R4: 2.707/0.00001

 1.88 0.959 0.921 - - - - Mlig455_054692 {REF} {Length: 626} {NoTransDecoderORF} {RNA1509_11173} {RNA1310_17833} {RNA815_36310.1}
89. MligTC455_39161 799 16.65 Mlig455_006271, Mlig455_006322

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.421

Region-enriched R4: 4.960/0.00000

Regeneration-downregulated R4: -3.116

Regeneration-depleted R4: -3.116

 SLC39A12, SLC39A4 1.88 0.963 0.917 - - - -

Mlig455_006271 {REF} {Length: 1917} {Pfam: ZIP Zinc transporter [PF02535.24, score=78.9]} {Human: ENSG00000148482, SLC39A12, solute carrier family 39 member 12, [Score=66.6, Expect=2e-11]} {Mouse: ENSMUSG00000024270, Slc39a6, solute carrier family 39 (metal ion transporter), member 6, [Score=61.2, Expect=8e-10]; ENSMUSG00000063354, Slc39a4, solute carrier family 39 (zinc transporter), member 4, [Score=58.5, Expect=6e-09]} {Dmel: FBgn0024236, foi, fear-of-intimacy, [Score=53.9, Expect=1e-07]} {Celegans: WBGene00021936, zipt-20, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [Score=52.8, Expect=2e-07]} {Smed: dd_Smed_v6_6113_0_1, dd_Smed_v6_6113_0_1, [Score=57.0, Expect=8e-09]} {RNA1509_5784} {RNA1310_16227, RNA1509_5784} {RNA1509_5784, RNA815_6534.1}

Mlig455_006322 {REF} {Length: 1785} {Pfam: ZIP Zinc transporter [PF02535.24, score=72.1]} {Human: ENSG00000147804, SLC39A4, solute carrier family 39 member 4, [Score=93.2, Expect=3e-21]; ENSG00000285243, SLC39A4, solute carrier family 39 member 4, [Score=93.2, Expect=2e-21]; ENSG00000141424, SLC39A6, solute carrier family 39 member 6, [Score=92.0, Expect=7e-21]} {Mouse: ENSMUSG00000024270, Slc39a6, solute carrier family 39 (metal ion transporter), member 6, [Score=90.5, Expect=2e-20]; ENSMUSG00000063354, Slc39a4, solute carrier family 39 (zinc transporter), member 4, [Score=87.8, Expect=1e-19]} {Dmel: FBgn0024236, foi, fear-of-intimacy, [Score=84.0, Expect=2e-18]} {Celegans: WBGene00044067, zipt-7.1, Histidine-rich membrane protein KE4 homolog 1, [Score=51.6, Expect=1e-07]} {Smed: dd_Smed_v6_5153_0_1, dd_Smed_v6_5153_0_1, [Score=87.4, Expect=6e-20]} {RNA1509_16042, RNA1509_5784} {RNA1310_16227, RNA1509_16042} {RNA1509_16042, RNA815_6534.1}
90. MligTC455_21311 183 3.81 Mlig455_023885

Neo: Germline

Age: Up-Up-Down

Region-specific R4: 5.787

Region-enriched R4: 2.789/0.01062

 IDE 1.879 0.968 0.911 - - - - Mlig455_023885 {REF} {Length: 4598} {Pfam: Middle or third domain of peptidase_M16 [PF16187.7, score=61.2]; Insulinase (Peptidase family M16) [PF00675.22, score=40.6]} {Human: ENSG00000119912, IDE, insulin degrading enzyme, [Score=91.3, Expect=6e-18]} {Mouse: ENSMUSG00000111624, Ide, insulin degrading enzyme, [Score=90.1, Expect=1e-17]; ENSMUSG00000056999, Ide, insulin degrading enzyme, [Score=90.1, Expect=1e-17]} {Dmel: FBgn0001247, Ide, Insulin degrading metalloproteinase, [Score=84.0, Expect=5e-16]} {RNA1509_17969} {RNA1310_919.1} {RNA815_266.1}
91. MligTC455_21313 179 3.73 Mlig455_048670

Neo: -

Age: -

Region-specific R4: 6.020

Region-enriched R4: 2.813/0.02876

 1.879 0.968 0.911 - - - - Mlig455_048670 {REF} {Length: 3069} {Pfam: Middle or third domain of peptidase_M16 [PF16187.7, score=94.5]} {Dmel: FBgn0001247, Ide, Insulin degrading metalloproteinase, [Score=115, Expect=5e-26]} {Celegans: WBGene00013492, Y70C5C.1, [Score=76.6, Expect=4e-14]} {RNA1509_17969} {RNA1310_919.1} {RNA815_266.1}
92. MligTC455_39095 154 3.22 Mlig455_038619

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.580

Region-enriched R4: 2.553/0.00458

 1.879 0.975 0.904 - - - - Mlig455_038619 {REF} {Length: 2605} {tRNA: Ala(CGC),pseudo, score=20.4} {Pfam: Wnt and FGF inhibitory regulator [PF13908.8, score=25.6]; Adenovirus E3 region protein CR2 [PF02439.17, score=19.0]} {RNA1509_14056} {RNA1310_24477} {RNA815_4998.1}
93. MligTC455_44584 779 16.23 Mlig455_043124

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.436

Region-enriched R4: 4.162/0.00000

 1.879 0.952 0.927 - - - - Mlig455_043124 {REF} {Length: 1050} {TRANSSPLICED} {RNA1509_2550} {RNA1310_28290.1} {RNA815_13404.2}
94. MligTC455_50918 226 4.71 Mlig455_006863

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.415

Region-enriched R4: 3.697/0.00000

 1.879 0.962 0.917 - - - - Mlig455_006863 {REF} {Length: 1310} {RNA1509_32284, RNA1509_44655} {RNA1310_28031.1, RNA1509_32284, RNA1509_44655} {RNA1509_32284, RNA1509_44655, RNA815_13214.1}
95. MligTC455_28301 250 5.22 Mlig455_016683

Neo: Irradiation

Age: Down-Down-Down

Region-specific R4: 5.932

 1.878 0.970 0.908 - - - - Mlig455_016683 {REF} {Length: 4552} {RNA1509_51631} {RNA1310_928.1} {RNA815_529.1}
96. MligTC455_26344 464 9.67 Mlig455_027365, Mlig455_036974

Neo: Germline

Age: Up-Up-Down, logFC(26M/2M)=0.300

Region-specific R4: 5.885

Region-enriched R4: 3.401/0.00008

 CSNK1D, TPTEP2-CSNK1E 1.877 0.923 0.954 - - - -

Mlig455_027365 {REF} {Length: 2133} {Human: ENSG00000283900, TPTEP2-CSNK1E, TPTEP2-CSNK1E readthrough, [Score=57.8, Expect=3e-08]; ENSG00000213923, CSNK1E, casein kinase 1 epsilon, [Score=57.8, Expect=3e-08]; ENSG00000141551, CSNK1D, casein kinase 1 delta, [Score=57.8, Expect=3e-08]} {Mouse: ENSMUSG00000022433, Csnk1e, casein kinase 1, epsilon, [Score=57.8, Expect=2e-08]; ENSMUSG00000025162, Csnk1d, casein kinase 1, delta, [Score=57.8, Expect=2e-08]} {Dmel: FBgn0037325, CG12147, [Score=60.8, Expect=1e-09]} {Celegans: WBGene00002203, kin-20, Casein kinase I isoform delta, [Score=54.3, Expect=9e-08]} {Smed: dd_Smed_v6_12103_0_1, dd_Smed_v6_12103_0_1, [Score=62.4, Expect=1e-10]} {RNA1509_7898} {RNA1310_12818} {RNA815_4660}

Mlig455_036974 {REF} {Length: 2060} {Human: ENSG00000141551, CSNK1D, casein kinase 1 delta, [Score=57.8, Expect=3e-08]; ENSG00000213923, CSNK1E, casein kinase 1 epsilon, [Score=57.0, Expect=4e-08]; ENSG00000283900, TPTEP2-CSNK1E, TPTEP2-CSNK1E readthrough, [Score=57.0, Expect=4e-08]} {Mouse: ENSMUSG00000025162, Csnk1d, casein kinase 1, delta, [Score=57.4, Expect=2e-08]; ENSMUSG00000022433, Csnk1e, casein kinase 1, epsilon, [Score=57.4, Expect=2e-08]} {Dmel: FBgn0037325, CG12147, [Score=58.9, Expect=5e-09]} {Celegans: WBGene00002203, kin-20, Casein kinase I isoform delta, [Score=54.7, Expect=7e-08]} {Smed: dd_Smed_v6_12103_0_1, dd_Smed_v6_12103_0_1, [Score=63.9, Expect=4e-11]} {RNA1509_7898} {RNA1310_12818} {RNA815_4660}
97. MligTC455_37408 100 2.08 Mlig455_002393

Neo: Germline

Age: -

Region-specific R4: 6.150

Region-enriched R4: 3.508/0.00966

 1.877 0.951 0.926 - - - - Mlig455_002393 {REF} {Length: 4607} {RNA1509_51360, RNA1509_51417, RNA1509_7722} {RNA1310_2237.1, RNA1509_51417, RNA1509_7722} {RNA1509_51417, RNA1509_7722, RNA815_726.1}
98. MligTC455_38762 228 4.76 Mlig455_040815, Mlig455_049185

Neo: Germline

Age: -

Region-specific R4: 5.563

Regeneration-upregulated R4: 3.391

Regeneration-enriched R4: 3.391

 1.877 0.971 0.906 - - - -

Mlig455_040815 {REF} {Length: 1369} {RNA1509_24921} {RNA1310_66040.1, RNA1509_24921} {RNA1509_24921, RNA815_35911}

Mlig455_049185 {REF} {Length: 1937} {RNA1509_24921} {RNA1310_66040.1} {RNA815_35911}
99. MligTC455_17181 23 0.48 Mlig455_036265, Mlig455_055388

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.189

 1.876 0.918 0.958 - - - -

Mlig455_036265 {REF} {Length: 1043} {Pfam: THAP domain [PF05485.14, score=43.7]} {Mouse: ENSMUSG00000039759, Thap3, THAP domain containing, apoptosis associated protein 3, [Score=46.2, Expect=6e-06]} {Dmel: FBgn0032730, CG10431, [Score=52.0, Expect=1e-07]} {RNA1509_30365} {RNA1310_20272} {RNA815_52972}

Mlig455_055388 {REF} {Length: 1047} {Pfam: THAP domain [PF05485.14, score=43.7]} {Mouse: ENSMUSG00000039759, Thap3, THAP domain containing, apoptosis associated protein 3, [Score=46.2, Expect=6e-06]} {Dmel: FBgn0032730, CG10431, [Score=52.0, Expect=1e-07]} {RNA1509_30365} {RNA1310_20272} {RNA815_52972}
100. MligTC455_20715 781 16.28 Mlig455_045430

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.189

Region-enriched R4: 4.102/0.00000

Regeneration-downregulated R4: -2.886

Regeneration-depleted R4: -2.886

 1.876 0.953 0.923 - - - - Mlig455_045430 {REF} {Length: 1357} {RNA1509_2747} {RNA1310_36757} {RNA815_17787}

There are 474 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA