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Results for MligTC455_21787

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_21787 1109 23.10 Mlig455_036503

Neo: -

Age: -

Region-enriched R5: 1.092/0.00022

 GIGYF2 Mlig455_036503 {REF} {Length: 6321} {Pfam: GYF domain [PF02213.18, score=60.7]} {Human: ENSG00000204120, GIGYF2, GRB10 interacting GYF protein 2, [RH, Score=89.0, Expect=4e-17]} {Mouse: ENSMUSG00000048000, Gigyf2, GRB10 interacting GYF protein 2, [Score=75.5, Expect=4e-13]} {Dmel: FBgn0039936, Gyf, Gigyf, [RH, Score=77.4, Expect=7e-14]} {Celegans: WBGene00016002, C18H9.3, GYF domain-containing protein C18H9.3, [RH, Score=95.9, Expect=9e-20]} {Smed: dd_Smed_v6_3448_0_1, dd_Smed_v6_3448_0_1, [RH, Score=65.9, Expect=1e-10]} {RNA1509_2625} {RNA1310_1336} {RNA815_4348}

Cumulative graph for MligTC455_21787

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.918 4.761 0.26269 0.91229
RegionR2 0.76 4.761 0.04575 0.25235
RegionR3 0.078 4.761 0.79631 1.00000
RegionR4 -0.832 4.761 0.01674 0.08969
RegionR5 1.092 4.761 0.00001 0.00022
RegionR6 0.265 4.761 0.38332 0.96155
RegionR7 0.09 4.761 0.82153 1.00000
RegionR8 -0.535 4.761 0.33477 0.96756

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.066 4.761 0.96145 1.00000
RegenerationR2 0.639 4.761 0.03660 0.31627
RegenerationR3 0.771 4.761 0.02758 0.29851
RegenerationR4 0.71 4.761 0.04485 0.34155
RegenerationR5 -0.208 4.761 0.48850 0.85133
RegenerationR6 0.714 4.761 0.03554 0.23613
RegenerationBL 0.777 4.761 0.07005 0.30818
RegenerationTP 0.36 4.761 0.47012 0.88057


Genes with expression patterns similar to MligTC455_21787

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_21787 1109 23.1 Mlig455_036503

Neo: -

Age: -

Region-enriched R5: 1.092/0.00022

 GIGYF2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_036503 {REF} {Length: 6321} {Pfam: GYF domain [PF02213.18, score=60.7]} {Human: ENSG00000204120, GIGYF2, GRB10 interacting GYF protein 2, [RH, Score=89.0, Expect=4e-17]} {Mouse: ENSMUSG00000048000, Gigyf2, GRB10 interacting GYF protein 2, [Score=75.5, Expect=4e-13]} {Dmel: FBgn0039936, Gyf, Gigyf, [RH, Score=77.4, Expect=7e-14]} {Celegans: WBGene00016002, C18H9.3, GYF domain-containing protein C18H9.3, [RH, Score=95.9, Expect=9e-20]} {Smed: dd_Smed_v6_3448_0_1, dd_Smed_v6_3448_0_1, [RH, Score=65.9, Expect=1e-10]} {RNA1509_2625} {RNA1310_1336} {RNA815_4348}
2. MligTC455_21788 1044 21.75 Mlig455_056393

Neo: -

Age: -

Region-specific R5: 1.366

Region-enriched R5: 1.128/0.00001

 GIGYF2 5.727 0.984 0.999 0.898 0.960 0.938 0.948 Mlig455_056393 {REF} {Length: 4885} {TRANSSPLICED} {Pfam: GYF domain [PF02213.18, score=60.7]} {Human: ENSG00000204120, GIGYF2, GRB10 interacting GYF protein 2, [RH, Score=89.0, Expect=4e-17]} {Mouse: ENSMUSG00000048000, Gigyf2, GRB10 interacting GYF protein 2, [RH, Score=62.0, Expect=4e-09]; ENSMUSG00000029714, Gigyf1, GRB10 interacting GYF protein 1, [RH, Score=60.5, Expect=1e-08]} {Dmel: FBgn0039936, Gyf, Gigyf, [RH, Score=79.0, Expect=2e-14]} {Celegans: WBGene00016002, C18H9.3, GYF domain-containing protein C18H9.3, [Score=97.4, Expect=3e-20]} {Smed: dd_Smed_v6_3448_0_1, dd_Smed_v6_3448_0_1, [RH, Score=65.9, Expect=1e-10]} {RNA1509_2625} {RNA1310_1336} {RNA815_4348}
3. MligTC455_40919 443 9.23 Mlig455_018626, Mlig455_018813

Neo: Irradiation

Age: -

 MED14 2.541 0.859 - - 0.732 - 0.950

Mlig455_018626 {REF} {Length: 4965} {TRANSSPLICED} {Pfam: Mediator complex subunit MED14 [PF08638.13, score=152.7]} {Human: ENSG00000180182, MED14, mediator complex subunit 14, [RH, Score=301, Expect=9e-84]} {Mouse: ENSMUSG00000064127, Med14, mediator complex subunit 14, [RH, Score=300, Expect=1e-87]} {Dmel: FBgn0035145, MED14, Mediator complex subunit 14, [RH, Score=306, Expect=2e-85]} {Celegans: WBGene00004343, rgr-1, Mediator of RNA polymerase II transcription subunit 14, [RH, Score=212, Expect=2e-55]} {Smed: dd_Smed_v6_6370_0_1, dd_Smed_v6_6370_0_1, [RH, Score=227, Expect=1e-60]} {RNA1509_12048} {RNA1310_5782.2, RNA1509_12048} {RNA1509_12048, RNA815_22099}

Mlig455_018813 {REF} {Length: 4732} {TRANSSPLICED} {Pfam: Mediator complex subunit MED14 [PF08638.13, score=152.7]} {Human: ENSG00000180182, MED14, mediator complex subunit 14, [RH, Score=300, Expect=4e-83]} {Mouse: ENSMUSG00000064127, Med14, mediator complex subunit 14, [RH, Score=299, Expect=6e-83]} {Dmel: FBgn0035145, MED14, Mediator complex subunit 14, [RH, Score=303, Expect=2e-84]} {Celegans: WBGene00004343, rgr-1, Mediator of RNA polymerase II transcription subunit 14, [RH, Score=213, Expect=1e-55]} {Smed: dd_Smed_v6_6370_0_1, dd_Smed_v6_6370_0_1, [RH, Score=226, Expect=3e-60]} {RNA1509_12048} {RNA1310_5782.2} {RNA815_22099}
4. MligTC455_42553 3321 69.18 Mlig455_008710

Neo: Irradiation

Age: -

Region-enriched R5: 2.253/0.00001

 2.491 - 0.729 0.811 0.951 - - Mlig455_008710 {REF} {Length: 3342} {Pfam: DDHD domain [PF02862.19, score=22.7]} {RNA1509_1273} {RNA1310_5765} {RNA815_4334.1}
5. MligTC455_23326 662 13.79 Mlig455_023622

Neo: -

Age: -

Region-enriched R4: 1.894/0.00877

 STAG1 1.725 - - - 0.956 0.769 - Mlig455_023622 {REF} {Length: 5721} {Pfam: STAG domain [PF08514.13, score=109.9]} {Human: ENSG00000118007, STAG1, stromal antigen 1, [RH, Score=908, Expect=0.0]; ENSG00000101972, STAG2, stromal antigen 2, [RH, Score=901, Expect=0.0]} {Mouse: ENSMUSG00000025862, Stag2, stromal antigen 2, [RH, Score=907, Expect=0.0]; ENSMUSG00000037286, Stag1, stromal antigen 1, [RH, Score=905, Expect=0.0]} {Dmel: FBgn0020616, SA, Stromalin, [RH, Score=854, Expect=0.0]} {Celegans: WBGene00004738, scc-3, Cohesin subunit scc-3, [RH, Score=612, Expect=0.0]} {Smed: dd_Smed_v6_7280_0_1, dd_Smed_v6_7280_0_1, [RH, Score=1008, Expect=0.0]} {RNA1509_2739} {RNA1310_911.1} {RNA815_315}
6. MligTC455_23325 661 13.77 Mlig455_023513

Neo: -

Age: -

Region-enriched R4: 1.889/0.00929

 1.717 - - - 0.960 0.757 - Mlig455_023513 {REF} {Length: 1550} {NoTransDecoderORF} {RNA1509_25945} {RNA1310_911.3} {RNA815_20456}
7. MligTC455_24982 6454 134.47 Mlig455_036775, Mlig455_036784

Neo: -

Age: -

Regeneration-upregulated BL: 1.368

Regeneration-enriched BL: 1.368

 SPTAN1 0.967 - - - 0.967 - -

Mlig455_036775 {REF} {Length: 8328} {TRANSSPLICED} {Pfam: Spectrin repeat [PF00435.23, score=1171.7]; Ca2+ insensitive EF hand [PF08726.12, score=69.2]; EF hand [PF00036.34, score=43.5]; EF-hand domain pair [PF13499.8, score=36.8]; EF-hand domain [PF13405.8, score=36.6]; EF-hand domain pair [PF13833.8, score=28.8]; EF hand [PF13202.8, score=26.1]} {Human: ENSG00000197694, SPTAN1, spectrin alpha, non-erythrocytic 1, [RH, Score=2292, Expect=0.0]} {Mouse: ENSMUSG00000057738, Sptan1, spectrin alpha, non-erythrocytic 1, [RH, Score=2303, Expect=0.0]} {Dmel: FBgn0250789, alpha-Spec, alpha Spectrin, [RH, Score=2400, Expect=0.0]} {Celegans: WBGene00004951, spc-1, SPeCtrin, [RH, Score=2167, Expect=0.0]} {Smed: dd_Smed_v6_919_0_1, dd_Smed_v6_919_0_1, [RH, Score=2591, Expect=0.0]} {RNA1509_150, RNA1509_6095} {RNA1310_231.1, RNA1509_150, RNA1509_6095} {RNA1509_150, RNA1509_6095, RNA815_81}

Mlig455_036784 {REF} {Length: 8323} {TRANSSPLICED} {Pfam: Spectrin repeat [PF00435.23, score=1170.9]; Ca2+ insensitive EF hand [PF08726.12, score=69.2]; EF hand [PF00036.34, score=43.5]; EF-hand domain pair [PF13499.8, score=37.0]; EF-hand domain [PF13405.8, score=36.6]; EF-hand domain pair [PF13833.8, score=28.8]; EF hand [PF13202.8, score=26.1]} {Human: ENSG00000197694, SPTAN1, spectrin alpha, non-erythrocytic 1, [RH, Score=2293, Expect=0.0]} {Mouse: ENSMUSG00000057738, Sptan1, spectrin alpha, non-erythrocytic 1, [RH, Score=2303, Expect=0.0]} {Dmel: FBgn0250789, alpha-Spec, alpha Spectrin, [RH, Score=2402, Expect=0.0]} {Celegans: WBGene00004951, spc-1, SPeCtrin, [RH, Score=2170, Expect=0.0]} {Smed: dd_Smed_v6_919_0_1, dd_Smed_v6_919_0_1, [RH, Score=2593, Expect=0.0]} {RNA1509_150} {RNA1310_231.1} {RNA815_81}
8. MligTC455_49010 1913 39.85 Mlig455_020240

Neo: -

Age: logFC(26M/2M)=-0.260

 NEK7 0.962 - - - - 0.962 - Mlig455_020240 {REF} {Length: 3119} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=217.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=155.4]; Fungal protein kinase [PF17667.3, score=24.6]; Kinase-like [PF14531.8, score=24.1]; ABC1 atypical kinase-like domain [PF03109.18, score=19.3]} {Human: ENSG00000151414, NEK7, NIMA related kinase 7, [RH, Score=486, Expect=5e-174]; ENSG00000119408, NEK6, NIMA related kinase 6, [RH, Score=466, Expect=5e-166]} {Mouse: ENSMUSG00000026393, Nek7, NIMA (never in mitosis gene a)-related expressed kinase 7, [RH, Score=488, Expect=5e-175]; ENSMUSG00000026749, Nek6, NIMA (never in mitosis gene a)-related expressed kinase 6, [RH, Score=467, Expect=1e-166]} {Dmel: FBgn0029970, Nek2, [Score=186, Expect=7e-53]} {Celegans: WBGene00008956, nekl-3, Serine/threonine-protein kinase nekl-3, [RH, Score=433, Expect=9e-154]} {Smed: dd_Smed_v6_8347_0_2, dd_Smed_v6_8347_0_2, [RH, Score=448, Expect=1e-159]} {RNA1509_56262, RNA1509_56413, RNA1509_8536} {RNA1310_10308.1, RNA1509_56262, RNA1509_56413, RNA1509_8536} {RNA1509_56262, RNA1509_56413, RNA1509_8536, RNA815_10804.1}
9. MligTC455_50173 1334 27.8 Mlig455_025822, Mlig455_067624

Neo: Int S/G2/M

Age: -

 UPF1 0.96 - - - 0.960 - -

Mlig455_025822 {REF} {Length: 4508} {Pfam: RNA helicase (UPF2 interacting domain) [PF09416.12, score=240.4]; AAA domain [PF13087.8, score=203.4]; AAA domain [PF13086.8, score=165.9]; RNA helicase UPF1, 1B domain [PF18141.3, score=109.2]; AAA domain [PF13604.8, score=46.4]; AAA domain [PF13245.8, score=40.9]; Type III restriction enzyme, res subunit [PF04851.17, score=25.2]; Uncharacterized conserved protein (DUF2075) [PF09848.11, score=21.8]; Helicase [PF05127.16, score=19.2]} {Human: ENSG00000005007, UPF1, UPF1, RNA helicase and ATPase, [RH, Score=1410, Expect=0.0]} {Mouse: ENSMUSG00000058301, Upf1, UPF1 regulator of nonsense transcripts homolog (yeast), [RH, Score=1410, Expect=0.0]} {Dmel: FBgn0030354, Upf1, [RH, Score=1241, Expect=0.0]} {Celegans: WBGene00004880, smg-2, Regulator of nonsense transcripts 1, [RH, Score=975, Expect=0.0]} {Smed: dd_Smed_v6_5185_0_1, dd_Smed_v6_5185_0_1, [RH, Score=1377, Expect=0.0]} {RNA1509_19309, RNA1509_2090} {RNA1310_1431, RNA1509_19309} {RNA1509_19309, RNA815_940}

Mlig455_067624 {REF} {Length: 5566} {Pfam: AAA domain [PF13087.8, score=204.2]; AAA domain [PF13086.8, score=123.5]; AAA domain [PF13604.8, score=34.7]; AAA domain [PF13245.8, score=26.3]; Viral (Superfamily 1) RNA helicase [PF01443.20, score=19.1]; Uncharacterized conserved protein (DUF2075) [PF09848.11, score=18.9]} {Human: ENSG00000005007, UPF1, UPF1, RNA helicase and ATPase, [Score=622, Expect=0.0]} {Mouse: ENSMUSG00000058301, Upf1, UPF1 regulator of nonsense transcripts homolog (yeast), [Score=621, Expect=0.0]} {Dmel: FBgn0030354, Upf1, [Score=534, Expect=1e-175]} {Celegans: WBGene00004880, smg-2, Regulator of nonsense transcripts 1, [Score=449, Expect=2e-144]} {Smed: dd_Smed_v6_5185_0_1, dd_Smed_v6_5185_0_1, [Score=592, Expect=0.0]} {RNA1509_2090} {RNA1310_1431} {RNA815_940}
10. MligTC455_37013 102 2.12 Mlig455_028784

Neo: -

Age: -

 RPA1 0.955 - - - 0.955 - - Mlig455_028784 {REF} {Length: 4559} {Pfam: Replication protein A OB domain [PF16900.7, score=62.3]; OB-fold nucleic acid binding domain [PF01336.27, score=43.1]} {Human: ENSG00000132383, RPA1, replication protein A1, [Score=92.4, Expect=7e-20]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [Score=86.3, Expect=5e-18]} {RNA1509_12100} {RNA1310_68428} {RNA815_14259}
11. MligTC455_45340 511 10.65 Mlig455_057131

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_057131 {REF} {Length: 4148} {TRANSSPLICED} {RNA1509_48206} {RNA1310_44348, RNA1509_48206} {RNA1509_48206, RNA815_20026}
12. MligTC455_47880 377 7.85 Mlig455_003874

Neo: Int S/G2/M

Age: Down-Up-Up

 0.954 - - - - 0.954 - Mlig455_003874 {REF} {Length: 1704} {TRANSSPLICED} {RNA1509_15949, RNA1509_23469} {RNA1310_16621.2, RNA1509_23469} {RNA1509_23469, RNA815_9106.1}

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