TomoSeq data search

Data search

Results for MligTC455_21836

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_21836	160	3.33	Mlig455_010256	Neo: - Age: -	DENND6B	Mlig455_010256 {REF} {Length: 3406} {TRANSSPLICED} {Pfam: Stabilization of polarity axis [PF08616.12, score=48.9]; DENN (AEX-3) domain [PF02141.23, score=27.4]; Transport protein Avl9 [PF09794.11, score=20.4]} {Human: ENSG00000205593, DENND6B, DENN domain containing 6B, [RH, Score=605, Expect=0.0]; ENSG00000174839, DENND6A, DENN domain containing 6A, [RH, Score=604, Expect=0.0]} {Mouse: ENSMUSG00000015377, Dennd6b, DENN/MADD domain containing 6B, [RH, Score=607, Expect=0.0]; ENSMUSG00000116230, Dennd6a, DENN/MADD domain containing 6A, [RH, Score=603, Expect=0.0]; ENSMUSG00000040818, Dennd6a, DENN/MADD domain containing 6A, [RH, Score=603, Expect=0.0]} {Dmel: FBgn0029756, CG3309, [RH, Score=425, Expect=1e-141]} {Celegans: WBGene00018777, F53H1.3, [RH, Score=462, Expect=2e-157]} {Smed: dd_Smed_v6_9382_0_1, dd_Smed_v6_9382_0_1, [RH, Score=541, Expect=0.0]} {RNA1509_11831} {RNA1310_12654, RNA1509_11831} {RNA1509_11831, RNA815_4678}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_21836

160

3.33

Mlig455_010256

Neo: -

Age: -

DENND6B

Mlig455_010256 {REF} {Length: 3406} {TRANSSPLICED} {Pfam: Stabilization of polarity axis [PF08616.12, score=48.9]; DENN (AEX-3) domain [PF02141.23, score=27.4]; Transport protein Avl9 [PF09794.11, score=20.4]} {Human: ENSG00000205593, DENND6B, DENN domain containing 6B, [RH, Score=605, Expect=0.0]; ENSG00000174839, DENND6A, DENN domain containing 6A, [RH, Score=604, Expect=0.0]} {Mouse: ENSMUSG00000015377, Dennd6b, DENN/MADD domain containing 6B, [RH, Score=607, Expect=0.0]; ENSMUSG00000116230, Dennd6a, DENN/MADD domain containing 6A, [RH, Score=603, Expect=0.0]; ENSMUSG00000040818, Dennd6a, DENN/MADD domain containing 6A, [RH, Score=603, Expect=0.0]} {Dmel: FBgn0029756, CG3309, [RH, Score=425, Expect=1e-141]} {Celegans: WBGene00018777, F53H1.3, [RH, Score=462, Expect=2e-157]} {Smed: dd_Smed_v6_9382_0_1, dd_Smed_v6_9382_0_1, [RH, Score=541, Expect=0.0]} {RNA1509_11831} {RNA1310_12654, RNA1509_11831} {RNA1509_11831, RNA815_4678}

Cumulative graph for MligTC455_21836

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.328	2.411	0.89941	1.00000
RegionR2	-0.758	2.411	0.95596	1.00000
RegionR3	0.951	2.411	0.22299	0.76458
RegionR4	2.014	2.411	0.03072	0.13812
RegionR5	1.639	2.411	0.02901	0.12647
RegionR6	1.513	2.411	0.05565	0.44292
RegionR7	-5.652	2.411	0.01463	0.21780
RegionR8	0.622	2.411	0.52250	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-4.956	2.411	0.41801	1.00000
RegenerationR2	0.105	2.411	0.89169	1.00000
RegenerationR3	-0.318	2.411	0.68945	0.94420
RegenerationR4	-0.004	2.411	0.98848	1.00000
RegenerationR5	0.1	2.411	0.89998	1.00000
RegenerationR6	-0.35	2.411	0.64115	0.89389
RegenerationBL	0.147	2.411	0.70278	1.00000
RegenerationTP	2.176	2.411	0.20680	0.64873

Genes with expression patterns similar to MligTC455_21836

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_21836	160	3.33	Mlig455_010256	Neo: - Age: -	DENND6B	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_010256 {REF} {Length: 3406} {TRANSSPLICED} {Pfam: Stabilization of polarity axis [PF08616.12, score=48.9]; DENN (AEX-3) domain [PF02141.23, score=27.4]; Transport protein Avl9 [PF09794.11, score=20.4]} {Human: ENSG00000205593, DENND6B, DENN domain containing 6B, [RH, Score=605, Expect=0.0]; ENSG00000174839, DENND6A, DENN domain containing 6A, [RH, Score=604, Expect=0.0]} {Mouse: ENSMUSG00000015377, Dennd6b, DENN/MADD domain containing 6B, [RH, Score=607, Expect=0.0]; ENSMUSG00000116230, Dennd6a, DENN/MADD domain containing 6A, [RH, Score=603, Expect=0.0]; ENSMUSG00000040818, Dennd6a, DENN/MADD domain containing 6A, [RH, Score=603, Expect=0.0]} {Dmel: FBgn0029756, CG3309, [RH, Score=425, Expect=1e-141]} {Celegans: WBGene00018777, F53H1.3, [RH, Score=462, Expect=2e-157]} {Smed: dd_Smed_v6_9382_0_1, dd_Smed_v6_9382_0_1, [RH, Score=541, Expect=0.0]} {RNA1509_11831} {RNA1310_12654, RNA1509_11831} {RNA1509_11831, RNA815_4678}
2.	MligTC455_16434	180	3.75	Mlig455_065893	Neo: Neoblast Age: - Region-enriched R4: 4.682/0.00000		0.967	-	-	-	-	0.967	-	Mlig455_065893 {REF} {Length: 1149} {RNA1310_54637} {RNA815_34864}
3.	MligTC455_52809	228	4.75	Mlig455_031250	Neo: - Age: - Region-enriched R5: 3.073/0.00003	RAD51	0.962	-	-	-	-	0.962	-	Mlig455_031250 {REF} {Length: 1864} {Pfam: Rad51 [PF08423.13, score=244.5]; Helix-hairpin-helix domain [PF14520.8, score=24.4]} {Human: ENSG00000051180, RAD51, RAD51 recombinase, [Score=343, Expect=4e-118]} {Mouse: ENSMUSG00000027323, Rad51, RAD51 recombinase, [Score=342, Expect=5e-118]} {Dmel: FBgn0003479, spn-A, spindle A, [Score=253, Expect=3e-83]} {Celegans: WBGene00004297, rad-51, RAD51 short isoform; RecA/Rad51/Dmc1-like protein, [Score=240, Expect=5e-78]} {Smed: dd_Smed_v6_8626_0_1, dd_Smed_v6_8626_0_1, [Score=288, Expect=2e-98]} {RNA1509_10251} {RNA1310_22466} {RNA815_9671}
4.	MligTC455_15406	42	0.88	Mlig455_035464	Neo: - Age: -	SLC5A7	0.953	-	-	-	-	0.953	-	Mlig455_035464 {REF} {Length: 4082} {Pfam: Sodium:solute symporter family [PF00474.19, score=79.3]} {Human: ENSG00000115665, SLC5A7, solute carrier family 5 member 7, [Score=462, Expect=2e-157]} {Mouse: ENSMUSG00000023945, Slc5a7, solute carrier family 5 (choline transporter), member 7, [Score=457, Expect=2e-155]} {Dmel: FBgn0038641, CG7708, [Score=450, Expect=2e-152]} {Celegans: WBGene00000501, cho-1, High-affinity choline transporter 1, [Score=451, Expect=2e-153]} {Smed: dd_Smed_v6_12883_0_1, dd_Smed_v6_12883_0_1, [Score=489, Expect=3e-168]} {RNA1509_18097} {RNA1310_50204.1} {RNA815_39429}