TomoSeq data search

Data search

Results for MligTC455_21844

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_21844	31	0.64	Mlig455_019750	Neo: Irradiation Age: logFC(26M/2M)=0.738 Regeneration-enriched R4: 8.462 Regeneration-enriched R3: 7.499 Regeneration-enriched R5: 7.218 Regeneration-enriched R2: 5.430	KCNK5	Mlig455_019750 {REF} {Length: 4838} {Pfam: Ion channel [PF07885.18, score=77.7]} {Human: ENSG00000164626, KCNK5, potassium two pore domain channel subfamily K member 5, [Score=61.2, Expect=6e-10]; ENSG00000095981, KCNK16, potassium two pore domain channel subfamily K member 16, [Score=59.3, Expect=2e-09]} {Mouse: ENSMUSG00000023387, Kcnk16, potassium channel, subfamily K, member 16, [Score=63.9, Expect=2e-11]} {Dmel: FBgn0038621, CG10864, [Score=64.3, Expect=2e-11]} {Celegans: WBGene00006657, twk-2, TWiK family of potassium channels, [Score=66.2, Expect=6e-12]} {Smed: dd_Smed_v6_17586_0_1, dd_Smed_v6_17586_0_1, [Score=65.5, Expect=6e-12]} {RNA1509_47162} {RNA1310_26078} {RNA815_11350}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_21844

0.64

Mlig455_019750

Neo: Irradiation

Age: logFC(26M/2M)=0.738

Regeneration-enriched R4: 8.462
Regeneration-enriched R3: 7.499
Regeneration-enriched R5: 7.218
Regeneration-enriched R2: 5.430

KCNK5

Mlig455_019750 {REF} {Length: 4838} {Pfam: Ion channel [PF07885.18, score=77.7]} {Human: ENSG00000164626, KCNK5, potassium two pore domain channel subfamily K member 5, [Score=61.2, Expect=6e-10]; ENSG00000095981, KCNK16, potassium two pore domain channel subfamily K member 16, [Score=59.3, Expect=2e-09]} {Mouse: ENSMUSG00000023387, Kcnk16, potassium channel, subfamily K, member 16, [Score=63.9, Expect=2e-11]} {Dmel: FBgn0038621, CG10864, [Score=64.3, Expect=2e-11]} {Celegans: WBGene00006657, twk-2, TWiK family of potassium channels, [Score=66.2, Expect=6e-12]} {Smed: dd_Smed_v6_17586_0_1, dd_Smed_v6_17586_0_1, [Score=65.5, Expect=6e-12]} {RNA1509_47162} {RNA1310_26078} {RNA815_11350}

Cumulative graph for MligTC455_21844

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-4.841	0.861	0.99977	1.00000
RegionR2	5.808	0.861	0.99978	1.00000
RegionR3	0.559	0.861	1.00000	1.00000
RegionR4	-5.182	0.861	0.99982	1.00000
RegionR5	-1.478	0.861	0.99984	1.00000
RegionR6	0.546	0.861	0.99999	1.00000
RegionR7	1.717	0.861	0.99993	1.00000
RegionR8	2.872	0.861	0.99993	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	9.526	0.861	0.35028	1.00000
RegenerationR2	5.43	0.861	0.00006	0.00834
RegenerationR3	7.499	0.861	0.00004	0.00595
RegenerationR4	8.462	0.861	0.00000	0.00055
RegenerationR5	7.218	0.861	0.00000	0.00125
RegenerationR6	7.017	0.861	0.00018	0.01269
RegenerationBL	5.144	0.861	0.02237	0.16347
RegenerationTP	6.667	0.861	0.00111	0.05050

Genes with expression patterns similar to MligTC455_21844

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_21844	31	0.64	Mlig455_019750	Neo: Irradiation Age: logFC(26M/2M)=0.738 Regeneration-enriched R4: 8.462 Regeneration-enriched R3: 7.499 Regeneration-enriched R5: 7.218 Regeneration-enriched R2: 5.430	KCNK5	2	-	-	-	-	1.000	1.000	Mlig455_019750 {REF} {Length: 4838} {Pfam: Ion channel [PF07885.18, score=77.7]} {Human: ENSG00000164626, KCNK5, potassium two pore domain channel subfamily K member 5, [Score=61.2, Expect=6e-10]; ENSG00000095981, KCNK16, potassium two pore domain channel subfamily K member 16, [Score=59.3, Expect=2e-09]} {Mouse: ENSMUSG00000023387, Kcnk16, potassium channel, subfamily K, member 16, [Score=63.9, Expect=2e-11]} {Dmel: FBgn0038621, CG10864, [Score=64.3, Expect=2e-11]} {Celegans: WBGene00006657, twk-2, TWiK family of potassium channels, [Score=66.2, Expect=6e-12]} {Smed: dd_Smed_v6_17586_0_1, dd_Smed_v6_17586_0_1, [Score=65.5, Expect=6e-12]} {RNA1509_47162} {RNA1310_26078} {RNA815_11350}
2.	MligTC455_44045	161	3.36	Mlig455_064189	Neo: - Age: -	CCDC17	0.956	-	-	-	-	0.956	-	Mlig455_064189 {REF} {Length: 4760} {TRANSSPLICED} {Human: ENSG00000159588, CCDC17, coiled-coil domain containing 17, [RH, Score=109, Expect=8e-24]} {Mouse: ENSMUSG00000034035, Ccdc17, coiled-coil domain containing 17, [RH, Score=104, Expect=2e-22]} {Smed: dd_Smed_v6_14654_0_1, dd_Smed_v6_14654_0_1, [RH, Score=491, Expect=2e-150]} {RNA1509_21725, RNA1509_31781} {RNA1310_2813.2, RNA1509_21725} {RNA1509_21725, RNA815_3640}
3.	MligTC455_32100	28	0.57	Mlig455_009386	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.596		0.954	-	-	-	-	0.954	-	Mlig455_009386 {REF} {Length: 6501} {Pfam: SHQ1 protein [PF04925.17, score=20.2]} {RNA1509_32552} {RNA1310_15329} {RNA815_6647}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts