Data search
Results for MligTC455_21853
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_21853 | 619 | 12.89 | Mlig455_010014, Mlig455_010056, Mlig455_063264 | Neo: - Age: - |
Mlig455_010014 {REF} {Length: 1731} {TRANSSPLICED} {RNA1509_24262, RNA1509_28997} {RNA1310_36946.1, RNA1509_24262} {RNA1509_24262, RNA815_19214} Mlig455_010056 {REF} {Length: 1738} {TRANSSPLICED} {RNA1509_28997} {RNA1310_36946.1, RNA1509_28997} {RNA1509_28997, RNA815_19214} Mlig455_063264 {REF} {Length: 1740} {TRANSSPLICED} {RNA1509_28997} {RNA1310_36946.1} {RNA815_19214} |
Cumulative graph for MligTC455_21853
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.859 | 4.142 | 0.15048 | 0.76567 | |
| RegionR2 | 0.964 | 4.142 | 0.27329 | 0.65805 | |
| RegionR3 | 0.6 | 4.142 | 0.48620 | 0.98580 | |
| RegionR4 | 0.816 | 4.142 | 0.36070 | 0.68356 | |
| RegionR5 | 1.548 | 4.142 | 0.00902 | 0.05355 | |
| RegionR6 | 0.511 | 4.142 | 0.55983 | 1.00000 | |
| RegionR7 | 0.783 | 4.142 | 0.41513 | 1.00000 | |
| RegionR8 | 0.638 | 4.142 | 0.56494 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.151 | 4.142 | 0.99988 | 1.00000 | |
| RegenerationR2 | 0.269 | 4.142 | 0.51712 | 0.87849 | |
| RegenerationR3 | 0.16 | 4.142 | 0.74793 | 0.96382 | |
| RegenerationR4 | 0.584 | 4.142 | 0.23915 | 0.68838 | |
| RegenerationR5 | 0.213 | 4.142 | 0.61564 | 0.91670 | |
| RegenerationR6 | 0.548 | 4.142 | 0.26725 | 0.61713 | |
| RegenerationBL | 0.484 | 4.142 | 0.41154 | 0.78102 | |
| RegenerationTP | 0.255 | 4.142 | 0.69475 | 1.00000 |
Genes with expression patterns similar to MligTC455_21853
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_21853 | 619 | 12.89 | Mlig455_010014, Mlig455_010056, Mlig455_063264 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_010014 {REF} {Length: 1731} {TRANSSPLICED} {RNA1509_24262, RNA1509_28997} {RNA1310_36946.1, RNA1509_24262} {RNA1509_24262, RNA815_19214} Mlig455_010056 {REF} {Length: 1738} {TRANSSPLICED} {RNA1509_28997} {RNA1310_36946.1, RNA1509_28997} {RNA1509_28997, RNA815_19214} Mlig455_063264 {REF} {Length: 1740} {TRANSSPLICED} {RNA1509_28997} {RNA1310_36946.1} {RNA815_19214} |
|
| 2. | MligTC455_43606 | 1674 | 34.88 | Mlig455_007946, Mlig455_008046, Mlig455_008088 | Neo: - Age: - Region-enriched R5: 1.300/0.00098 |
HNRNPR, SYNCRIP | 2.449 | - | - | - | 0.756 | 0.726 | 0.967 | Mlig455_007946 {REF} {Length: 2555} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=91.6]; CTLH/CRA C-terminal to LisH motif domain [PF10607.11, score=69.0]; LisH [PF08513.13, score=29.4]} {Human: ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [Score=225, Expect=3e-64]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=9e-63]; ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=9e-63]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [Score=226, Expect=1e-64]; ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [Score=222, Expect=1e-62]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=239, Expect=7e-70]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=207, Expect=7e-58]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=134, Expect=2e-32]} {RNA1509_26124} {RNA1310_13847.3} {RNA815_19802} Mlig455_008046 {REF} {Length: 2528} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=91.6]; CTLH/CRA C-terminal to LisH motif domain [PF10607.11, score=69.0]; LisH [PF08513.13, score=29.4]} {Human: ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [Score=225, Expect=3e-64]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=9e-63]; ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=9e-63]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [Score=226, Expect=1e-64]; ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [Score=222, Expect=1e-62]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=239, Expect=7e-70]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=207, Expect=7e-58]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=134, Expect=2e-32]} {RNA1509_26124} {RNA1310_13847.3} {RNA815_19802} Mlig455_008088 {REF} {Length: 2551} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=88.6]; CTLH/CRA C-terminal to LisH motif domain [PF10607.11, score=69.5]; LisH [PF08513.13, score=29.5]} {Human: ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=8e-63]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=8e-63]; ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [Score=223, Expect=2e-63]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [Score=224, Expect=2e-63]; ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [Score=222, Expect=2e-62]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=237, Expect=2e-69]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=207, Expect=1e-57]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=132, Expect=7e-32]} {RNA1509_26124, RNA1509_26907} {RNA1310_13847.3, RNA1509_26124, RNA1509_26907} {RNA1509_26124, RNA1509_26907, RNA815_19802} |
| 3. | MligTC455_22170 | 321 | 6.68 | Mlig455_029360 | Neo: Irradiation |
CPSF2 | 1.653 | - | - | - | - | 0.701 | 0.952 | Mlig455_029360 {REF} {Length: 2588} {TRANSSPLICED} {Pfam: Metallo-beta-lactamase superfamily domain [PF16661.7, score=195.4]; Cleavage and polyadenylation factor 2 C-terminal [PF13299.8, score=92.1]; Beta-Casp domain [PF10996.10, score=67.8]; Zn-dependent metallo-hydrolase RNA specificity domain [PF07521.14, score=37.9]; Beta-lactamase superfamily domain [PF12706.9, score=22.2]; Metallo-beta-lactamase superfamily [PF00753.29, score=19.6]} {Human: ENSG00000165934, CPSF2, cleavage and polyadenylation specific factor 2, [RH, Score=660, Expect=0.0]} {Mouse: ENSMUSG00000041781, Cpsf2, cleavage and polyadenylation specific factor 2, [RH, Score=662, Expect=0.0]} {Dmel: FBgn0027873, Cpsf100, Cleavage and polyadenylation specificity factor 100, [RH, Score=651, Expect=0.0]} {Celegans: WBGene00017313, cpsf-2, Probable cleavage and polyadenylation specificity factor subunit 2, [RH, Score=410, Expect=4e-131]} {Smed: dd_Smed_v6_5812_0_1, dd_Smed_v6_5812_0_1, [RH, Score=624, Expect=0.0]} {RNA1509_30533, RNA1509_6127} {RNA1310_6453, RNA1509_30533, RNA1509_6127} {RNA1509_30533, RNA1509_6127, RNA815_10477} |
| 4. | MligTC455_24374 | 299 | 6.23 | Mlig455_048539 | Neo: Irradiation Age: logFC(26M/2M)=0.743 Region-enriched R5: 3.604/0.00032 |
0.973 | - | - | - | 0.973 | - | - | Mlig455_048539 {REF} {Length: 1901} {RNA1509_622} {RNA1310_17391} {RNA815_9863} | |
| 5. | MligTC455_22171 | 1082 | 22.54 | Mlig455_029400 | Neo: Int S/G2/M Age: Down-Down-Up |
CPSF2 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_029400 {REF} {Length: 2518} {Pfam: Metallo-beta-lactamase superfamily domain [PF16661.7, score=196.3]; Beta-Casp domain [PF10996.10, score=67.7]; Cleavage and polyadenylation factor 2 C-terminal [PF13299.8, score=58.1]; Zn-dependent metallo-hydrolase RNA specificity domain [PF07521.14, score=38.0]; Beta-lactamase superfamily domain [PF12706.9, score=22.2]; Metallo-beta-lactamase superfamily [PF00753.29, score=21.1]} {Human: ENSG00000165934, CPSF2, cleavage and polyadenylation specific factor 2, [RH, Score=485, Expect=1e-160]} {Mouse: ENSMUSG00000041781, Cpsf2, cleavage and polyadenylation specific factor 2, [RH, Score=609, Expect=0.0]} {Dmel: FBgn0027873, Cpsf100, Cleavage and polyadenylation specificity factor 100, [RH, Score=593, Expect=0.0]} {Celegans: WBGene00017313, cpsf-2, Probable cleavage and polyadenylation specificity factor subunit 2, [RH, Score=400, Expect=1e-127]} {Smed: dd_Smed_v6_5812_0_1, dd_Smed_v6_5812_0_1, [RH, Score=588, Expect=0.0]} {RNA1509_6127} {RNA1310_6453} {RNA815_10477} |
| 6. | MligTC455_26321 | 1422 | 29.62 | Mlig455_045203 | Neo: - Age: - |
EIF3G | 0.955 | - | - | - | - | - | 0.955 | Mlig455_045203 {REF} {Length: 1257} {TRANSSPLICED} {Pfam: Eukaryotic translation initiation factor 3 subunit G [PF12353.10, score=107.1]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=67.0]} {Human: ENSG00000130811, EIF3G, eukaryotic translation initiation factor 3 subunit G, [RH, Score=230, Expect=1e-73]} {Mouse: ENSMUSG00000070319, Eif3g, eukaryotic translation initiation factor 3, subunit G, [RH, Score=229, Expect=2e-73]} {Dmel: FBgn0029629, eIF3g1, eukaryotic translation initiation factor 3 subunit g1, [RH, Score=165, Expect=3e-49]} {Celegans: WBGene00001230, eif-3.G, Eukaryotic translation initiation factor 3 subunit G, [Score=137, Expect=9e-39]} {Smed: dd_Smed_v6_15937_0_1, dd_Smed_v6_15937_0_1, [RH, Score=176, Expect=9e-54]} {RNA1509_41257} {RNA1310_22196} {RNA815_4984} |