Data search


search
Exact
Search

Results for MligTC455_21897

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_21897 466 9.72 Mlig455_012084, Mlig455_029080

Neo: Int S/G2/M

Age: -

POLH

Mlig455_012084 {REF} {Length: 3317} {Pfam: impB/mucB/samB family [PF00817.22, score=140.8]; impB/mucB/samB family C-terminal domain [PF11799.10, score=33.6]; Ubiquitin-Binding Zinc Finger [PF18439.3, score=26.2]} {Human: ENSG00000170734, POLH, DNA polymerase eta, [RH, Score=245, Expect=1e-70]} {Mouse: ENSMUSG00000023953, Polh, polymerase (DNA directed), eta (RAD 30 related), [RH, Score=224, Expect=2e-63]} {Dmel: FBgn0037141, DNApol-eta, [RH, Score=256, Expect=9e-74]} {Celegans: WBGene00018721, polh-1, DNA polymerase eta; POLH (DNA polymerase eta) homolog, [RH, Score=187, Expect=4e-51]} {Smed: dd_Smed_v6_6500_0_8, dd_Smed_v6_6500_0_8, [RH, Score=258, Expect=9e-79]} {RNA1509_26112} {RNA1310_10059} {RNA815_9673}

Mlig455_029080 {REF} {Length: 2863} {Pfam: impB/mucB/samB family [PF00817.22, score=137.9]; impB/mucB/samB family C-terminal domain [PF11799.10, score=33.0]; Ubiquitin-Binding Zinc Finger [PF18439.3, score=26.4]} {Human: ENSG00000170734, POLH, DNA polymerase eta, [Score=228, Expect=7e-65]} {Mouse: ENSMUSG00000023953, Polh, polymerase (DNA directed), eta (RAD 30 related), [Score=205, Expect=6e-57]} {Dmel: FBgn0037141, DNApol-eta, [Score=242, Expect=2e-69]} {Celegans: WBGene00018721, polh-1, DNA polymerase eta; POLH (DNA polymerase eta) homolog, [Score=174, Expect=1e-46]} {Smed: dd_Smed_v6_6500_0_8, dd_Smed_v6_6500_0_8, [Score=245, Expect=8e-75]} {RNA1509_26112} {RNA1310_10059, RNA1509_26112} {RNA1509_26112, RNA815_9673}

Cumulative graph for MligTC455_21897

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.948 3.74 0.40476 1.00000
RegionR2 0.302 3.74 0.64765 0.98352
RegionR3 -0.829 3.74 0.16736 0.69035
RegionR4 0.504 3.74 0.40049 0.72690
RegionR5 0.878 3.74 0.05067 0.18933
RegionR6 -1.034 3.74 0.06477 0.47679
RegionR7 -0.813 3.74 0.27916 0.91165
RegionR8 0.042 3.74 0.95955 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.449 3.74 0.06550 0.74295
RegenerationR2 -0.522 3.74 0.38241 0.80289
RegenerationR3 0.673 3.74 0.31735 0.74610
RegenerationR4 -0.236 3.74 0.70220 0.95472
RegenerationR5 -0.488 3.74 0.39845 0.79833
RegenerationR6 1.78 3.74 0.00768 0.10732
RegenerationBL 0.407 3.74 0.60411 0.95051
RegenerationTP -0.922 3.74 0.31720 0.76200


Genes with expression patterns similar to MligTC455_21897

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_21897 466 9.72 Mlig455_012084, Mlig455_029080

Neo: Int S/G2/M

Age: -

POLH 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_012084 {REF} {Length: 3317} {Pfam: impB/mucB/samB family [PF00817.22, score=140.8]; impB/mucB/samB family C-terminal domain [PF11799.10, score=33.6]; Ubiquitin-Binding Zinc Finger [PF18439.3, score=26.2]} {Human: ENSG00000170734, POLH, DNA polymerase eta, [RH, Score=245, Expect=1e-70]} {Mouse: ENSMUSG00000023953, Polh, polymerase (DNA directed), eta (RAD 30 related), [RH, Score=224, Expect=2e-63]} {Dmel: FBgn0037141, DNApol-eta, [RH, Score=256, Expect=9e-74]} {Celegans: WBGene00018721, polh-1, DNA polymerase eta; POLH (DNA polymerase eta) homolog, [RH, Score=187, Expect=4e-51]} {Smed: dd_Smed_v6_6500_0_8, dd_Smed_v6_6500_0_8, [RH, Score=258, Expect=9e-79]} {RNA1509_26112} {RNA1310_10059} {RNA815_9673}

Mlig455_029080 {REF} {Length: 2863} {Pfam: impB/mucB/samB family [PF00817.22, score=137.9]; impB/mucB/samB family C-terminal domain [PF11799.10, score=33.0]; Ubiquitin-Binding Zinc Finger [PF18439.3, score=26.4]} {Human: ENSG00000170734, POLH, DNA polymerase eta, [Score=228, Expect=7e-65]} {Mouse: ENSMUSG00000023953, Polh, polymerase (DNA directed), eta (RAD 30 related), [Score=205, Expect=6e-57]} {Dmel: FBgn0037141, DNApol-eta, [Score=242, Expect=2e-69]} {Celegans: WBGene00018721, polh-1, DNA polymerase eta; POLH (DNA polymerase eta) homolog, [Score=174, Expect=1e-46]} {Smed: dd_Smed_v6_6500_0_8, dd_Smed_v6_6500_0_8, [Score=245, Expect=8e-75]} {RNA1509_26112} {RNA1310_10059, RNA1509_26112} {RNA1509_26112, RNA815_9673}
2. MligTC455_39877 321 6.69 Mlig455_068056

Neo: -

Age: Down-Up-Down

Region-enriched R5: 1.975/0.00587

NOC3L 0.963 - - - - - 0.963 Mlig455_068056 {REF} {Length: 3343} {TRANSSPLICED} {Pfam: Nucleolar complex-associated protein [PF07540.13, score=67.4]} {Human: ENSG00000173145, NOC3L, NOC3 like DNA replication regulator, [Score=180, Expect=9e-48]} {Mouse: ENSMUSG00000024999, Noc3l, NOC3 like DNA replication regulator, [Score=175, Expect=4e-46]} {Dmel: FBgn0037489, CG1234, [Score=141, Expect=7e-35]} {Celegans: WBGene00016508, C37H5.5, Nucleolar complex protein 3 homolog, [Score=118, Expect=1e-27]} {Smed: dd_Smed_v6_13062_0_1, dd_Smed_v6_13062_0_1, [Score=91.7, Expect=2e-19]} {RNA1509_7132} {RNA1310_9494} {RNA815_11181}
3. MligTC455_22671 212 4.43 Mlig455_069012

Neo: -

Age: -

Region-enriched R4: 1.918/0.01410

0.96 - - - - 0.960 - Mlig455_069012 {REF} {Length: 3155} {RNA1509_55358} {RNA1310_19226} {RNA815_1882}
4. MligTC455_23766 256 5.33 Mlig455_008056

Neo: -

Age: Down-Down-Down

SLC25A46 0.956 - - - - - 0.956 Mlig455_008056 {REF} {Length: 2118} {Pfam: Mitochondrial carrier protein [PF00153.29, score=50.8]} {Human: ENSG00000164209, SLC25A46, solute carrier family 25 member 46, [RH, Score=277, Expect=1e-89]} {Mouse: ENSMUSG00000024259, Slc25a46, solute carrier family 25, member 46, [RH, Score=281, Expect=2e-91]} {Dmel: FBgn0030717, CG8931, [RH, Score=275, Expect=2e-89]} {Celegans: WBGene00012740, slc-25A46, SLC (SoLute Carrier) homolog, [RH, Score=199, Expect=4e-59]} {Smed: dd_Smed_v6_11392_0_1, dd_Smed_v6_11392_0_1, [RH, Score=251, Expect=1e-80]} {RNA1509_49737} {RNA1310_670.1} {RNA815_2290.1}
5. MligTC455_28948 433 9.03 Mlig455_014729

Neo: Int S/G2/M

Age: -

0.95 - - - - - 0.950 Mlig455_014729 {REF} {Length: 2778} {TRANSSPLICED} {RNA1509_32400, RNA1509_53618} {RNA1310_6731.1, RNA1509_32400, RNA1509_53618} {RNA1509_32400, RNA1509_53618, RNA815_15157}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA