M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_21919

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_21919 37 0.78 Mlig455_022429

Neo: -

Age: Up-Down-Down

 Mlig455_022429 {REF} {Length: 759} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21392} {RNA1310_585.1} {RNA815_122.1}

Cumulative graph for MligTC455_21919

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.928 1.058 1.00000 1.00000
RegionR2 0.083 1.058 0.74423 1.00000
RegionR3 1.225 1.058 0.34471 0.87996
RegionR4 1.509 1.058 0.35350 0.67547
RegionR5 2.055 1.058 0.08809 0.27948
RegionR6 0.191 1.058 0.68183 1.00000
RegionR7 -2.022 1.058 1.00000 1.00000
RegionR8 -2.112 1.058 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.538 1.058 0.99994 1.00000
RegenerationR2 1.23 1.058 0.37317 0.79744
RegenerationR3 0.373 1.058 0.76985 0.97156
RegenerationR4 0.368 1.058 0.80523 0.98783
RegenerationR5 1.313 1.058 0.16111 0.58482
RegenerationR6 2.281 1.058 0.11505 0.41762
RegenerationBL 4.303 1.058 0.04465 0.24183
RegenerationTP 3.374 1.058 0.24249 0.68820


Genes with expression patterns similar to MligTC455_21919

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_21919 37 0.78 Mlig455_022429

Neo: -

Age: Up-Down-Down

 3 1.000 - - - 1.000 1.000 Mlig455_022429 {REF} {Length: 759} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_21392} {RNA1310_585.1} {RNA815_122.1}
2. MligTC455_21920 37 0.77 Mlig455_031783

Neo: -

Age: Up-Down-Down

 2.696 0.924 - - - 0.797 0.975 Mlig455_031783 {REF} {Length: 772} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_14793} {RNA1310_585.1} {RNA815_122.1}
3. MligTC455_16199 114 2.37 Mlig455_041013, Mlig455_041178

Neo: Irradiation

Age: -

Region-enriched R2: 9.007/0.00037

 0.981 - - - - - 0.981

Mlig455_041013 {REF} {Length: 3381} {RNA1509_42904} {RNA1310_20434} {RNA815_22064}

Mlig455_041178 {REF} {Length: 2722} {RNA1509_42904} {RNA1310_20004} {RNA815_22064}
4. MligTC455_43080 8 0.16 Mlig455_070726

Neo: Irradiation

Age: -

 DRD2 0.973 - - - - - 0.973 Mlig455_070726 {REF} {Length: 3421} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=260.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=62.4]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=37.7]; Olfactory receptor [PF13853.8, score=24.8]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=24.1]} {Human: ENSG00000149295, DRD2, dopamine receptor D2, [RH, Score=244, Expect=8e-75]} {Mouse: ENSMUSG00000022705, Drd3, dopamine receptor D3, [RH, Score=238, Expect=2e-72]} {Dmel: FBgn0053517, Dop2R, Dopamine 2-like receptor, [RH, Score=335, Expect=3e-106]} {Celegans: WBGene00006475, tyra-3, TYRAmine receptor, [Score=201, Expect=8e-58]} {Smed: dd_Smed_v6_27884_0_1, dd_Smed_v6_27884_0_1, [Score=272, Expect=3e-85]} {RNA1509_32954} {RNA1310_12406.1} {RNA815_23978}
5. MligTC455_17703 1222 25.46 Mlig455_010854, Mlig455_010885, Mlig455_033210

Neo: Irradiation

Age: logFC(26M/2M)=0.351

Region-enriched R5: 5.264/0.00000

 0.97 - - - - - 0.970

Mlig455_010854 {REF} {Length: 2662} {Pfam: WSC domain [PF01822.21, score=95.4]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=51.6, Expect=3e-06]} {RNA1509_5671} {RNA1310_7104} {RNA815_5707}

Mlig455_010885 {REF} {Length: 2734} {Pfam: WSC domain [PF01822.21, score=95.3]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=52.0, Expect=2e-06]} {RNA1509_5671} {RNA1310_7104, RNA1509_5671} {RNA1509_5671, RNA815_5707}

Mlig455_033210 {REF} {Length: 2739} {Pfam: WSC domain [PF01822.21, score=96.0]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=51.2, Expect=4e-06]} {RNA1509_54686, RNA1509_5671} {RNA1310_7104, RNA1509_54686} {RNA1509_54686, RNA815_5707}
6. MligTC455_43968 6 0.13 Mlig455_036285

Neo: -

Age: -

 0.97 - - - - - 0.970 Mlig455_036285 {REF} {Length: 1131} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=51.5]; Zinc knuckle [PF13696.8, score=18.7]} {RNA1509_36940, RNA1509_8997} {RNA1310_29194, RNA1509_8997} {RNA1509_8997, RNA815_13634}
7. MligTC455_55691 20 0.42 Mlig455_030257

Neo: -

Age: -

 0.97 - - - - - 0.970 Mlig455_030257 {REF} {Length: 10} {NoTransDecoderORF}
8. MligTC455_13940 33 0.68 Mlig455_009937, Mlig455_035115

Neo: -

Age: -

Region-enriched R4: 7.698/0.00432

 ASIC1 0.969 - - - - 0.969 -

Mlig455_009937 {REF} {Length: 2745} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=86.2]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=51.6, Expect=1e-06]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=51.2, Expect=8e-07]; ENSMUSG00000020704, Asic2, acid-sensing (proton-gated) ion channel 2, [Score=48.9, Expect=4e-06]} {Celegans: WBGene00003174, mec-10, Degenerin mec-10, [Score=59.7, Expect=1e-09]} {Smed: dd_Smed_v6_31771_0_1, dd_Smed_v6_31771_0_1, [Score=68.6, Expect=8e-13]} {RNA1509_30015} {RNA1310_28165} {RNA815_4127}

Mlig455_035115 {REF} {Length: 3798} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=100.4]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=51.2, Expect=3e-06]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=50.8, Expect=3e-06]; ENSMUSG00000020704, Asic2, acid-sensing (proton-gated) ion channel 2, [Score=48.9, Expect=1e-05]} {Celegans: WBGene00003174, mec-10, Degenerin mec-10, [Score=59.7, Expect=4e-09]} {Smed: dd_Smed_v6_31771_0_1, dd_Smed_v6_31771_0_1, [Score=67.8, Expect=6e-12]} {RNA1509_30015} {RNA1310_28165} {RNA815_4127}
9. MligTC455_08452 59 1.22 Mlig455_027354

Neo: Irradiation

Age: Down-Up-Up, logFC(26M/2M)=0.450

Region-enriched R5: 5.083/0.00002

 0.968 - - - - - 0.968 Mlig455_027354 {REF} {Length: 1611} {RNA1509_42043} {RNA1310_19488} {RNA815_18221}
10. MligTC455_24921 169 3.53 Mlig455_055130, Mlig455_064022, Mlig455_068594

Neo: -

Age: -

 0.968 - - - - 0.968 -

Mlig455_055130 {REF} {Length: 5554} {Mouse: ENSMUSG00000079051, Gm14025, predicted gene 14025, [Score=58.9, Expect=6e-08]} {RNA1509_36794, RNA1509_45848} {RNA1310_3132.1, RNA1509_45848} {RNA1509_45848, RNA815_9224}

Mlig455_064022 {REF} {Length: 5554} {Mouse: ENSMUSG00000079051, Gm14025, predicted gene 14025, [Score=58.5, Expect=7e-08]} {RNA1509_36794} {RNA1310_3132.1} {RNA815_9224}

Mlig455_068594 {REF} {Length: 4836} {Pfam: Vinculin family [PF01044.21, score=20.7]} {RNA1509_36794} {RNA1310_3132.1} {RNA815_9224}
11. MligTC455_12863 41 0.85 Mlig455_004293

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_004293 {REF} {Length: 2112} {Pfam: Immunoglobulin domain [PF13927.8, score=26.8]; Immunoglobulin domain [PF13895.8, score=23.4]} {RNA1509_37987} {RNA1310_55399} {RNA815_29559}
12. MligTC455_14639 165 3.43 Mlig455_067782

Neo: Irradiation

Age: Down-Up-Up

Region-enriched R5: 3.938/0.00057

 0.967 - - - - - 0.967 Mlig455_067782 {REF} {Length: 1635} {RNA1509_57675} {RNA1310_19662, RNA1509_57675} {RNA1509_57675, RNA815_9746}
13. MligTC455_05620 10 0.21 Mlig455_062637

Neo: -

Age: -

 0.966 - - - - - 0.966 Mlig455_062637 {REF} {Length: 752} {RNA1509_37658} {RNA1310_40107} {RNA815_57578}
14. MligTC455_47466 1347 28.07 Mlig455_040185

Neo: Irradiation

Age: -

Region-specific R5: 5.756

Region-enriched R5: 4.770/0.00000
Region-enriched R6: 2.360/0.00987

Regeneration-downregulated R6: -4.285

Regeneration-depleted R6: -4.285

 0.966 - - - - - 0.966 Mlig455_040185 {REF} {Length: 1698} {RNA1509_1415, RNA1509_40056} {RNA1310_23383.1, RNA1509_40056} {RNA1509_40056, RNA815_9900}
15. MligTC455_34112 65 1.35 Mlig455_013791, Mlig455_013923

Neo: Irradiation

Age: logFC(26M/2M)=0.605

Region-enriched R5: 3.535/0.00182

 AC243734.1, CHRNA7 0.964 - - - - - 0.964

Mlig455_013791 {REF} {Length: 2292} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=165.3]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=94.5]} {Human: ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=239, Expect=3e-71]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=239, Expect=3e-71]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=238, Expect=5e-71]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=238, Expect=3e-71]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=218, Expect=5e-63]} {Celegans: WBGene00000058, acr-19, AcetylCholine Receptor; Acetylcholine receptor (63.2 kD) (Acr-19), [Score=237, Expect=3e-70]} {Smed: dd_Smed_v6_8058_0_1, dd_Smed_v6_8058_0_1, [Score=211, Expect=7e-61]} {RNA1310_24918} {RNA815_19482}

Mlig455_013923 {REF} {Length: 5041} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=163.0]; Ankyrin repeats (3 copies) [PF12796.9, score=117.3]; Ankyrin repeats (many copies) [PF13637.8, score=95.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=94.4]; Ankyrin repeat [PF13606.8, score=86.8]; Ankyrin repeats (many copies) [PF13857.8, score=84.0]; Ankyrin repeat [PF00023.32, score=79.8]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=240, Expect=2e-68]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=240, Expect=2e-68]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=239, Expect=5e-68]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=240, Expect=2e-68]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=219, Expect=7e-61]} {Celegans: WBGene00000058, acr-19, AcetylCholine Receptor; Acetylcholine receptor (63.2 kD) (Acr-19), [Score=238, Expect=2e-67]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=213, Expect=1e-58]} {RNA1509_8073} {RNA1310_2090.2} {RNA815_994.1}
16. MligTC455_19988 46 0.95 Mlig455_063753

Neo: Irradiation

Age: Down-Up-Up

Region-enriched R5: 3.701/0.02989

 0.963 - - - - - 0.963 Mlig455_063753 {REF} {Length: 1693} {RNA1509_36472} {RNA1310_18743, RNA1509_36472} {RNA1509_36472, RNA815_40714}
17. MligTC455_52244 33 0.69 Mlig455_060594

Neo: Irradiation

Age: Down-Up-Up, logFC(26M/2M)=0.389

 0.963 - - - - - 0.963 Mlig455_060594 {REF} {Length: 1571} {TRANSSPLICED} {RNA1509_21129} {RNA1310_49417} {RNA815_23429}
18. MligTC455_25713 20 0.42 Mlig455_007373

Neo: -

Age: -

 0.962 - - - - - 0.962 Mlig455_007373 {REF} {Length: 1626} {Pfam: Homeodomain [PF00046.31, score=20.7]} {RNA1509_10691} {RNA1310_18777} {RNA815_15127}
19. MligTC455_13121 126 2.63 Mlig455_065658

Neo: -

Age: Down-Up-Down

Region-enriched R6: 5.049/0.00894
Region-enriched R5: 4.148/0.00800

 0.961 - - - - - 0.961 Mlig455_065658 {REF} {Length: 766} {TRANSSPLICED} {RNA1509_40134} {RNA1310_47393} {RNA815_23067}
20. MligTC455_40601 263 5.47 Mlig455_029412

Neo: Irradiation

Age: Up-Up-Up, logFC(26M/2M)=0.836

Region-enriched R5: 4.324/0.00000
Region-enriched R2: 3.939/0.04857
Region-enriched R6: 3.193/0.01627

 0.96 - - - - - 0.960 Mlig455_029412 {REF} {Length: 3066} {RNA1509_5943} {RNA1310_6152} {RNA815_12144}
21. MligTC455_48709 298 6.2 Mlig455_006032

Neo: Irradiation

Age: logFC(26M/2M)=0.429

Region-enriched R5: 4.381/0.00000

 ASCL1 0.96 - - - - - 0.960 Mlig455_006032 {REF} {Length: 1845} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=45.3]} {Human: ENSG00000139352, ASCL1, achaete-scute family bHLH transcription factor 1, [RH, Score=58.2, Expect=2e-09]} {Mouse: ENSMUSG00000020052, Ascl1, achaete-scute family bHLH transcription factor 1, [RH, Score=58.2, Expect=1e-09]} {Dmel: FBgn0004170, sc, scute, [Score=53.5, Expect=6e-08]} {Celegans: WBGene00001950, hlh-3, Helix-loop-helix protein 3, [RH, Score=57.4, Expect=7e-10]} {Smed: dd_Smed_v6_26877_0_1, dd_Smed_v6_26877_0_1, [Score=48.5, Expect=1e-07]} {RNA1509_32326} {RNA1310_24899, RNA1509_32326} {RNA1509_32326, RNA815_13879}
22. MligTC455_15221 133 2.76 Mlig455_035746

Neo: Irradiation

Age: logFC(26M/2M)=0.563

 MCTP2 0.958 - - - - - 0.958 Mlig455_035746 {REF} {Length: 2900} {Pfam: C2 domain [PF00168.32, score=98.4]; Plant phosphoribosyltransferase C-terminal [PF08372.12, score=29.1]} {Human: ENSG00000140563, MCTP2, multiple C2 and transmembrane domain containing 2, [Score=256, Expect=1e-73]} {Mouse: ENSMUSG00000032776, Mctp2, multiple C2 domains, transmembrane 2, [Score=239, Expect=7e-68]; ENSMUSG00000021596, Mctp1, multiple C2 domains, transmembrane 1, [Score=230, Expect=3e-64]} {Dmel: FBgn0034389, Mctp, Multiple C2 domain and transmembrane region protein, [Score=192, Expect=3e-51]} {Celegans: WBGene00017063, mctp-1, Multiple C2 and Transmembrane region Protein family homolog, [Score=188, Expect=1e-50]} {Smed: dd_Smed_v6_13224_0_1, dd_Smed_v6_13224_0_1, [Score=52.8, Expect=6e-07]} {RNA1509_39731} {RNA1310_12030, RNA1509_39731} {RNA1509_39731, RNA815_47476}
23. MligTC455_47465 5748 119.75 Mlig455_033403, Mlig455_033451

Neo: Irradiation

Age: -

Region-specific R5: 5.518

Region-enriched R5: 4.616/0.00000
Region-enriched R6: 2.108/0.04359

Regeneration-downregulated R6: -4.376

Regeneration-depleted R6: -4.376

 0.958 - - - - - 0.958

Mlig455_033403 {REF} {Length: 1515} {RNA1509_1415} {RNA1310_23383.1} {RNA815_9900}

Mlig455_033451 {REF} {Length: 1695} {RNA1509_1415, RNA1509_16582, RNA1509_3804, RNA1509_6740} {RNA1310_23383.1, RNA1509_1415, RNA1509_16582, RNA1509_3804, RNA1509_6740} {RNA1509_1415, RNA1509_16582, RNA1509_3804, RNA1509_6740, RNA815_9900}
24. MligTC455_07790 232 4.82 Mlig455_055978, Mlig455_055987, Mlig455_056086

Neo: Irradiation

Age: -

Region-enriched R5: 5.572/0.00131

 ARHGAP11A 0.957 - - - - - 0.957

Mlig455_055978 {REF} {Length: 1897} {Pfam: RhoGAP domain [PF00620.29, score=66.9]} {Human: ENSG00000275568, ARHGAP11A, Rho GTPase activating protein 11A, [Score=78.6, Expect=9e-15]; ENSG00000198826, ARHGAP11A, Rho GTPase activating protein 11A, [Score=78.6, Expect=9e-15]; ENSG00000282168, ARHGAP11A, Rho GTPase activating protein 11A, [Score=77.4, Expect=1e-14]} {Mouse: ENSMUSG00000041219, Arhgap11a, Rho GTPase activating protein 11A, [Score=81.3, Expect=9e-16]} {Celegans: WBGene00015303, rga-6, Rho GTPase Activating protein, [Score=54.3, Expect=1e-07]} {Smed: dd_Smed_v6_8708_0_2, dd_Smed_v6_8708_0_2, [Score=47.8, Expect=1e-05]} {RNA1310_36776} {RNA815_36128}

Mlig455_055987 {REF} {Length: 1915} {Pfam: RhoGAP domain [PF00620.29, score=68.0]} {Human: ENSG00000198826, ARHGAP11A, Rho GTPase activating protein 11A, [Score=76.3, Expect=5e-14]; ENSG00000275568, ARHGAP11A, Rho GTPase activating protein 11A, [Score=76.3, Expect=5e-14]; ENSG00000282168, ARHGAP11A, Rho GTPase activating protein 11A, [Score=75.5, Expect=5e-14]} {Mouse: ENSMUSG00000041219, Arhgap11a, Rho GTPase activating protein 11A, [Score=78.2, Expect=9e-15]} {Celegans: WBGene00015303, rga-6, Rho GTPase Activating protein, [Score=54.3, Expect=2e-07]} {Smed: dd_Smed_v6_8708_0_1, dd_Smed_v6_8708_0_1, [Score=49.3, Expect=4e-06]} {RNA1310_36776} {RNA815_36128}

Mlig455_056086 {REF} {Length: 1915} {Pfam: RhoGAP domain [PF00620.29, score=68.0]} {Human: ENSG00000198826, ARHGAP11A, Rho GTPase activating protein 11A, [Score=76.3, Expect=5e-14]; ENSG00000275568, ARHGAP11A, Rho GTPase activating protein 11A, [Score=76.3, Expect=5e-14]; ENSG00000282168, ARHGAP11A, Rho GTPase activating protein 11A, [Score=75.5, Expect=5e-14]} {Mouse: ENSMUSG00000041219, Arhgap11a, Rho GTPase activating protein 11A, [Score=78.2, Expect=9e-15]} {Celegans: WBGene00015303, rga-6, Rho GTPase Activating protein, [Score=54.3, Expect=2e-07]} {Smed: dd_Smed_v6_8708_0_1, dd_Smed_v6_8708_0_1, [Score=49.3, Expect=4e-06]} {RNA1310_36776} {RNA815_36128}
25. MligTC455_19987 274 5.7 Mlig455_000085

Neo: Irradiation

Age: -

Region-enriched R5: 3.467/0.00013
Region-enriched R6: 2.980/0.03194

 0.957 - - - - - 0.957 Mlig455_000085 {REF} {Length: 1739} {RNA1509_36472} {RNA1310_18743} {RNA815_40714}
26. MligTC455_46412 1984 41.32 Mlig455_036443

Neo: Germline

Age: -

Region-enriched R5: 4.091/0.00000

 0.957 - - - - - 0.957 Mlig455_036443 {REF} {Length: 2239} {TRANSSPLICED} {RNA1509_21823, RNA1509_23682, RNA1509_27933, RNA1509_44758} {RNA1310_14703.1, RNA1509_21823, RNA1509_23682, RNA1509_27933, RNA1509_44758} {RNA1509_21823, RNA1509_23682, RNA1509_27933, RNA1509_44758, RNA815_5916.1}
27. MligTC455_04522 25 0.52 Mlig455_027146

Neo: Germline

Age: -

 PITX1 0.956 - - - - - 0.956 Mlig455_027146 {REF} {Length: 3053} {Pfam: Homeodomain [PF00046.31, score=60.0]} {Human: ENSG00000069011, PITX1, paired like homeodomain 1, [Score=64.3, Expect=1e-10]; ENSG00000134438, RAX, retina and anterior neural fold homeobox, [Score=62.8, Expect=5e-10]; ENSG00000133937, GSC, goosecoid homeobox, [Score=61.2, Expect=8e-10]; ENSG00000107859, PITX3, paired like homeodomain 3, [Score=61.2, Expect=1e-09]; ENSG00000164093, PITX2, paired like homeodomain 2, [Score=61.2, Expect=1e-09]} {Mouse: ENSMUSG00000021506, Pitx1, paired-like homeodomain transcription factor 1, [Score=64.3, Expect=1e-10]; ENSMUSG00000024518, Rax, retina and anterior neural fold homeobox, [Score=63.5, Expect=2e-10]; ENSMUSG00000026497, Mixl1, Mix1 homeobox-like 1 (Xenopus laevis), [Score=62.4, Expect=2e-10]; ENSMUSG00000028023, Pitx2, paired-like homeodomain transcription factor 2, [Score=61.6, Expect=7e-10]; ENSMUSG00000025229, Pitx3, paired-like homeodomain transcription factor 3, [Score=61.2, Expect=8e-10]} {Dmel: FBgn0052532, CG32532, [Score=67.0, Expect=1e-11]} {Celegans: WBGene00006778, unc-42, [Score=64.3, Expect=1e-11]} {Smed: dd_Smed_v6_21801_0_1, dd_Smed_v6_21801_0_1, [Score=68.2, Expect=5e-12]} {RNA1509_54866} {RNA1310_13977} {RNA815_39410}
28. MligTC455_08523 130 2.7 Mlig455_021758

Neo: Irradiation

Age: Down-Up-Up, logFC(26M/2M)=0.509

Region-specific R5: 5.704

Region-enriched R5: 4.902/0.00000

 0.956 - - - - - 0.956 Mlig455_021758 {REF} {Length: 1150} {RNA1509_52274} {RNA1310_36077.1} {RNA815_32590}
29. MligTC455_19726 79 1.65 Mlig455_028844

Neo: -

Age: -

Region-enriched R5: 4.127/0.00342

 0.956 - - - - - 0.956 Mlig455_028844 {REF} {Length: 885} {NoTransDecoderORF} {RNA1509_3671} {RNA1310_76700} {RNA815_7498}
30. MligTC455_35011 387 8.07 Mlig455_060710

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.676

 CALML5 0.955 - - - - - 0.955 Mlig455_060710 {REF} {Length: 1545} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=51.8]; EF-hand domain pair [PF13499.8, score=50.0]; EF-hand domain [PF13405.8, score=42.7]; EF-hand domain pair [PF13833.8, score=41.2]; EF hand [PF13202.8, score=39.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=26.6]} {Human: ENSG00000178372, CALML5, calmodulin like 5, [Score=56.2, Expect=3e-10]} {Mouse: ENSMUSG00000005649, Cabp5, calcium binding protein 5, [Score=55.5, Expect=8e-10]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=48.5, Expect=1e-07]} {Celegans: WBGene00006861, cal-5, CALmodulin related genes, [Score=62.8, Expect=6e-13]} {Smed: dd_Smed_v6_11942_0_1, dd_Smed_v6_11942_0_1, [Score=50.4, Expect=2e-08]} {RNA1509_32665} {RNA1310_29494.2, RNA1509_32665} {RNA1509_32665, RNA815_16454.1}
31. MligTC455_45715 5 0.1 Mlig455_014512

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_014512 {REF} {Length: 792} {NoTransDecoderORF} {RNA1310_63015.1}
32. MligTC455_10629 238 4.97 Mlig455_001734, Mlig455_063321, Mlig455_063325

Neo: Irradiation

Age: -

Region-enriched R5: 5.064/0.00131

 0.953 - - - - - 0.953

Mlig455_001734 {REF} {Length: 2851} {RNA1509_31449} {RNA1310_6253} {RNA815_13646}

Mlig455_063321 {REF} {Length: 1634} {RNA1509_45380} {RNA1310_6253} {RNA815_13646}

Mlig455_063325 {REF} {Length: 3146} {RNA1509_31449, RNA1509_45380} {RNA1310_6253, RNA1509_31449, RNA1509_45380} {RNA1509_31449, RNA1509_45380, RNA815_13646}
33. MligTC455_15220 241 5.02 Mlig455_029259, Mlig455_035645

Neo: Germline

Age: -

Region-enriched R5: 5.246/0.00002

 MCTP2 0.953 - - - - - 0.953

Mlig455_029259 {REF} {Length: 2928} {Pfam: C2 domain [PF00168.32, score=98.4]; Plant phosphoribosyltransferase C-terminal [PF08372.12, score=29.1]} {Human: ENSG00000140563, MCTP2, multiple C2 and transmembrane domain containing 2, [Score=256, Expect=7e-74]} {Mouse: ENSMUSG00000032776, Mctp2, multiple C2 domains, transmembrane 2, [Score=240, Expect=3e-68]; ENSMUSG00000021596, Mctp1, multiple C2 domains, transmembrane 1, [Score=231, Expect=1e-64]} {Dmel: FBgn0034389, Mctp, Multiple C2 domain and transmembrane region protein, [Score=193, Expect=1e-51]} {Celegans: WBGene00017063, mctp-1, Multiple C2 and Transmembrane region Protein family homolog, [Score=188, Expect=1e-50]} {Smed: dd_Smed_v6_13224_0_1, dd_Smed_v6_13224_0_1, [Score=52.8, Expect=6e-07]} {RNA1509_39731} {RNA1310_12030} {RNA815_47476}

Mlig455_035645 {REF} {Length: 2621} {Pfam: C2 domain [PF00168.32, score=98.4]; Plant phosphoribosyltransferase C-terminal [PF08372.12, score=29.1]} {Human: ENSG00000140563, MCTP2, multiple C2 and transmembrane domain containing 2, [Score=256, Expect=7e-74]} {Mouse: ENSMUSG00000032776, Mctp2, multiple C2 domains, transmembrane 2, [Score=240, Expect=3e-68]; ENSMUSG00000021596, Mctp1, multiple C2 domains, transmembrane 1, [Score=231, Expect=1e-64]} {Dmel: FBgn0034389, Mctp, Multiple C2 domain and transmembrane region protein, [Score=193, Expect=1e-51]} {Celegans: WBGene00017063, mctp-1, Multiple C2 and Transmembrane region Protein family homolog, [Score=188, Expect=1e-50]} {Smed: dd_Smed_v6_13224_0_1, dd_Smed_v6_13224_0_1, [Score=52.8, Expect=6e-07]} {RNA1509_39731} {RNA1310_12030} {RNA815_50848}
34. MligTC455_34661 540 11.26 Mlig455_064380

Neo: Irradiation

Age: Up-Down-Up

Region-enriched R5: 4.169/0.00002

 CD109 0.953 - - - - - 0.953 Mlig455_064380 {REF} {Length: 4999} {Pfam: A-macroglobulin TED domain [PF07678.16, score=185.2]; Alpha-2-macroglobulin family [PF00207.24, score=72.5]; MG2 domain [PF01835.21, score=53.6]; Macroglobulin domain MG3 [PF17791.3, score=51.0]; A-macroglobulin receptor binding domain [PF07677.16, score=46.7]; Alpha-2-macroglobulin bait region domain [PF07703.16, score=30.4]} {Human: ENSG00000156535, CD109, CD109 molecule, [Score=363, Expect=5e-103]} {Mouse: ENSMUSG00000046186, Cd109, CD109 antigen, [Score=333, Expect=4e-93]} {Dmel: FBgn0041182, Tep2, Thioester-containing protein 2, [Score=323, Expect=3e-90]} {Celegans: WBGene00013969, tep-1, TEP (ThiolEster containing Protein), [RH, Score=350, Expect=5e-99]} {Smed: dd_Smed_v6_568_0_5, dd_Smed_v6_568_0_5, [Score=181, Expect=1e-45]} {RNA1509_3371, RNA1509_38241} {RNA1310_1185.2, RNA1509_3371, RNA1509_38241} {RNA1509_3371, RNA1509_38241, RNA815_4673}
35. MligTC455_34872 10 0.2 Mlig455_051938

Neo: -

Age: Up-Up-Down

 CDC26 0.953 - - - - - 0.953 Mlig455_051938 {REF} {Length: 476} {TRANSSPLICED} {Pfam: Anaphase-promoting complex APC subunit CDC26 [PF10471.11, score=28.4]} {Human: ENSG00000176386, CDC26, cell division cycle 26, [Score=45.4, Expect=2e-07]} {Mouse: ENSMUSG00000066149, Cdc26, cell division cycle 26, [Score=44.7, Expect=2e-07]} {RNA1509_31363} {RNA1310_30359} {RNA815_19141.2}
36. MligTC455_38352 22 0.47 Mlig455_058090

Neo: -

Age: -

Region-enriched R5: 5.072/0.00672

 0.953 - - - - - 0.953 Mlig455_058090 {REF} {Length: 1498} {RNA1509_37368} {RNA1310_24656} {RNA815_16237}
37. MligTC455_34321 1697 35.35 Mlig455_044668, Mlig455_046870

Neo: Irradiation

Age: Down-Up-Up, logFC(26M/2M)=0.317

Region-specific R5: 3.870

Region-enriched R5: 3.468/0.00000
Region-enriched R6: 1.570/0.04433

 PDS5B 0.952 - - - - - 0.952

Mlig455_044668 {REF} {Length: 2102} {Human: ENSG00000083642, PDS5B, PDS5 cohesin associated factor B, [Score=105, Expect=2e-23]} {Mouse: ENSMUSG00000034021, Pds5b, PDS5 cohesin associated factor B, [Score=107, Expect=3e-24]} {RNA1509_44685} {RNA1310_1423.1} {RNA815_501}

Mlig455_046870 {REF} {Length: 1345} {Pfam: Universal stress protein family [PF00582.28, score=90.0]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=92.0, Expect=4e-24]} {RNA1509_28679, RNA1509_35242, RNA1509_46675} {RNA1310_35829.1, RNA1509_28679, RNA1509_35242, RNA1509_46675} {RNA1509_28679, RNA1509_35242, RNA1509_46675, RNA815_17143.1}
38. MligTC455_08301 9 0.19 Mlig455_034387

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_034387 {REF} {Length: 1074} {NoTransDecoderORF} {RNA1509_18523} {RNA1310_13418.1} {RNA815_10309}
39. MligTC455_10737 461 9.6 Mlig455_062756

Neo: Germline

Age: logFC(26M/2M)=0.376

Region-enriched R5: 4.257/0.00000
Region-enriched R2: 4.234/0.00737

 CTTNBP2NL 0.951 - - - - - 0.951 Mlig455_062756 {REF} {Length: 4086} {TRANSSPLICED} {Pfam: Cortactin-binding protein-2 [PF09727.11, score=115.8]} {Human: ENSG00000143079, CTTNBP2NL, CTTNBP2 N-terminal like, [Score=97.4, Expect=1e-21]} {Mouse: ENSMUSG00000062127, Cttnbp2nl, CTTNBP2 N-terminal like, [Score=88.6, Expect=2e-17]} {Dmel: FBgn0034308, CG10915, [Score=79.0, Expect=1e-14]} {Celegans: WBGene00015646, mlt-10, [Score=165, Expect=4e-42]} {Smed: dd_Smed_v6_6806_0_1, dd_Smed_v6_6806_0_1, [Score=120, Expect=3e-28]} {RNA1509_15550} {RNA1310_16829} {RNA815_15947}
40. MligTC455_34462 54 1.13 Mlig455_033965, Mlig455_058027

Neo: Neoblast

Age: -

 CELF3 0.951 - - - - 0.951 -

Mlig455_033965 {REF} {Length: 634} {Celegans: WBGene00021449, mltn-7, MLt-TeN (Mlt-10) related, [Score=49.7, Expect=5e-07]}

Mlig455_058027 {REF} {Length: 2471} {Human: ENSG00000159409, CELF3, CUGBP Elav-like family member 3, [Score=56.6, Expect=9e-09]; ENSG00000048740, CELF2, CUGBP Elav-like family member 2, [Score=56.2, Expect=1e-08]; ENSG00000101489, CELF4, CUGBP Elav-like family member 4, [Score=55.5, Expect=4e-09]; ENSG00000161082, CELF5, CUGBP Elav-like family member 5, [Score=54.7, Expect=5e-08]; ENSG00000273025, AC009690.3, novel transcript, [Score=54.7, Expect=5e-08]; ENSG00000140488, CELF6, CUGBP Elav-like family member 6, [Score=54.7, Expect=4e-08]; ENSG00000149187, CELF1, CUGBP Elav-like family member 1, [Score=54.3, Expect=6e-08]} {Mouse: ENSMUSG00000028137, Celf3, CUGBP, Elav-like family member 3, [Score=57.0, Expect=5e-09]; ENSMUSG00000002107, Celf2, CUGBP, Elav-like family member 2, [Score=56.2, Expect=1e-08]; ENSMUSG00000024268, Celf4, CUGBP, Elav-like family member 4, [Score=55.1, Expect=2e-08]; ENSMUSG00000032297, Celf6, CUGBP, Elav-like family member 6, [Score=54.7, Expect=2e-08]; ENSMUSG00000005506, Celf1, CUGBP, Elav-like family member 1, [Score=54.3, Expect=4e-08]; ENSMUSG00000110883, Celf1, CUGBP, Elav-like family member 1, [Score=54.3, Expect=4e-08]} {Dmel: FBgn0264001, bru3, bruno 3, [Score=57.0, Expect=3e-09]} {Celegans: WBGene00006807, unc-75, Putative RNA-binding protein, [Score=58.2, Expect=1e-09]} {Smed: dd_Smed_v6_11349_0_1, dd_Smed_v6_11349_0_1, [Score=55.5, Expect=7e-09]} {RNA1509_40041} {RNA1310_25362.1, RNA1509_40041} {RNA1509_40041, RNA815_13994}
41. MligTC455_34466 99 2.07 Mlig455_064508

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_064508 {REF} {Length: 669} {NoTransDecoderORF} {RNA1509_59804} {RNA1310_35910.2} {RNA815_21530}
42. MligTC455_35084 441 9.18 Mlig455_022660

Neo: -

Age: -

Region-specific R5: 2.748

Region-enriched R5: 2.462/0.00000

 0.951 - - - - - 0.951 Mlig455_022660 {REF} {Length: 1993} {RNA1509_8095} {RNA1310_19437} {RNA815_11004}
43. MligTC455_35102 843 17.57 Mlig455_016438

Neo: Irradiation

Age: Down-Up-Up, logFC(26M/2M)=0.543

Region-enriched R5: 4.245/0.00000
Region-enriched R2: 3.764/0.00855
Region-enriched R6: 3.105/0.00200

 SLC26A5 0.951 - - - - - 0.951 Mlig455_016438 {REF} {Length: 2901} {Pfam: Sulfate permease family [PF00916.22, score=305.3]; STAS domain [PF01740.23, score=85.5]} {Human: ENSG00000170615, SLC26A5, solute carrier family 26 member 5, [Score=349, Expect=8e-108]; ENSG00000091138, SLC26A3, solute carrier family 26 member 3, [Score=334, Expect=1e-101]} {Mouse: ENSMUSG00000029015, Slc26a5, solute carrier family 26, member 5, [Score=344, Expect=5e-106]} {Dmel: FBgn0036770, Prestin, [Score=284, Expect=1e-83]} {Celegans: WBGene00013963, sulp-8, Anion transporter SULP-8a; Anion transporter SULP-8b; SULfate Permease family, [Score=279, Expect=2e-83]} {Smed: dd_Smed_v6_8150_0_1, dd_Smed_v6_8150_0_1, [Score=566, Expect=0.0]} {RNA1509_29339, RNA1509_7959} {RNA1310_6677.2, RNA1509_29339, RNA1509_7959} {RNA1509_29339, RNA1509_7959, RNA815_2073}
44. MligTC455_35085 883 18.41 Mlig455_022667, Mlig455_022678

Neo: Int S/G2/M

Age: -

Region-specific R5: 2.744

Region-enriched R5: 2.542/0.00000

 KIF14 0.95 - - - - - 0.950

Mlig455_022667 {REF} {Length: 3885} {TRANSSPLICED} {Pfam: Kinesin motor domain [PF00225.25, score=329.0]; Microtubule binding [PF16796.7, score=65.7]} {Human: ENSG00000118193, KIF14, kinesin family member 14, [Score=362, Expect=5e-104]} {Mouse: ENSMUSG00000041498, Kif14, kinesin family member 14, [Score=360, Expect=3e-103]} {Dmel: FBgn0004374, neb, nebbish, [Score=323, Expect=6e-93]} {Celegans: WBGene00006831, unc-104, Kinesin-like protein unc-104, [Score=290, Expect=1e-80]} {Smed: dd_Smed_v6_7089_0_1, dd_Smed_v6_7089_0_1, [Score=285, Expect=3e-79]} {RNA1509_59775, RNA1509_8095} {RNA1310_2684, RNA1509_59775} {RNA1509_59775, RNA815_4220}

Mlig455_022678 {REF} {Length: 3888} {TRANSSPLICED} {Pfam: Kinesin motor domain [PF00225.25, score=328.4]; Microtubule binding [PF16796.7, score=65.4]} {Human: ENSG00000118193, KIF14, kinesin family member 14, [Score=362, Expect=7e-104]} {Mouse: ENSMUSG00000041498, Kif14, kinesin family member 14, [Score=361, Expect=7e-104]} {Dmel: FBgn0004374, neb, nebbish, [Score=321, Expect=4e-92]} {Celegans: WBGene00006831, unc-104, Kinesin-like protein unc-104, [Score=291, Expect=9e-81]} {Smed: dd_Smed_v6_7089_0_1, dd_Smed_v6_7089_0_1, [Score=287, Expect=6e-80]} {RNA1509_8095} {RNA1310_2684} {RNA815_4220}
45. MligTC455_40600 449 9.35 Mlig455_029370

Neo: Irradiation

Age: logFC(26M/2M)=0.459

Region-enriched R5: 4.772/0.00000
Region-enriched R6: 3.374/0.00545

 0.95 - - - - - 0.950 Mlig455_029370 {REF} {Length: 3031} {RNA1509_5943} {RNA1310_6152, RNA1509_5943} {RNA1509_5943, RNA815_12144}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA