Data search
Results for MligTC455_21930
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_21930 | 554 | 11.54 | Mlig455_026257 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.503/0.00104 Regeneration-enriched TP: 2.762 |
RRM2 | Mlig455_026257 {REF} {Length: 2131} {TRANSSPLICED} {Pfam: Ribonucleotide reductase, small chain [PF00268.23, score=381.6]} {Human: ENSG00000171848, RRM2, ribonucleotide reductase regulatory subunit M2, [RH, Score=530, Expect=0.0]; ENSG00000048392, RRM2B, ribonucleotide reductase regulatory TP53 inducible subunit M2B, [RH, Score=510, Expect=0.0]} {Mouse: ENSMUSG00000020649, Rrm2, ribonucleotide reductase M2, [RH, Score=533, Expect=0.0]; ENSMUSG00000022292, Rrm2b, ribonucleotide reductase M2 B (TP53 inducible), [RH, Score=509, Expect=0.0]} {Dmel: FBgn0011704, RnrS, Ribonucleoside diphosphate reductase small subunit, [RH, Score=527, Expect=0.0]} {Celegans: WBGene00004392, rnr-2, Ribonucleoside-diphosphate reductase small chain, [RH, Score=482, Expect=6e-171]} {Smed: dd_Smed_v6_2286_0_1, dd_Smed_v6_2286_0_1, [RH, Score=457, Expect=3e-162]} {RNA1509_49317, RNA1509_55807, RNA1509_56984, RNA1509_8818} {RNA1310_21187.1, RNA1509_49317, RNA1509_55807, RNA1509_56984} {RNA1509_49317, RNA1509_55807, RNA1509_56984, RNA815_4852.1} |
Cumulative graph for MligTC455_21930
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.897 | 3.883 | 0.51078 | 1.00000 | |
| RegionR2 | -1.662 | 3.883 | 0.02318 | 0.16881 | |
| RegionR3 | 0.457 | 3.883 | 0.33193 | 0.86975 | |
| RegionR4 | 0.636 | 3.883 | 0.17019 | 0.43358 | |
| RegionR5 | 1.503 | 3.883 | 0.00006 | 0.00104 | |
| RegionR6 | 1.222 | 3.883 | 0.00658 | 0.13022 | |
| RegionR7 | -0.876 | 3.883 | 0.32527 | 0.96028 | |
| RegionR8 | -0.381 | 3.883 | 0.71499 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.679 | 3.883 | 0.33324 | 1.00000 | |
| RegenerationR2 | 2.562 | 3.883 | 0.00002 | 0.00368 | |
| RegenerationR3 | 1.353 | 3.883 | 0.00469 | 0.12345 | |
| RegenerationR4 | 0.946 | 3.883 | 0.03345 | 0.29487 | |
| RegenerationR5 | 0.613 | 3.883 | 0.11505 | 0.51077 | |
| RegenerationR6 | 2.329 | 3.883 | 0.00000 | 0.00003 | |
| RegenerationBL | 2.338 | 3.883 | 0.00005 | 0.00257 | |
| RegenerationTP | 2.762 | 3.883 | 0.00006 | 0.00830 |
Genes with expression patterns similar to MligTC455_21930
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_21930 | 554 | 11.54 | Mlig455_026257 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.503/0.00104 Regeneration-enriched TP: 2.762 |
RRM2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_026257 {REF} {Length: 2131} {TRANSSPLICED} {Pfam: Ribonucleotide reductase, small chain [PF00268.23, score=381.6]} {Human: ENSG00000171848, RRM2, ribonucleotide reductase regulatory subunit M2, [RH, Score=530, Expect=0.0]; ENSG00000048392, RRM2B, ribonucleotide reductase regulatory TP53 inducible subunit M2B, [RH, Score=510, Expect=0.0]} {Mouse: ENSMUSG00000020649, Rrm2, ribonucleotide reductase M2, [RH, Score=533, Expect=0.0]; ENSMUSG00000022292, Rrm2b, ribonucleotide reductase M2 B (TP53 inducible), [RH, Score=509, Expect=0.0]} {Dmel: FBgn0011704, RnrS, Ribonucleoside diphosphate reductase small subunit, [RH, Score=527, Expect=0.0]} {Celegans: WBGene00004392, rnr-2, Ribonucleoside-diphosphate reductase small chain, [RH, Score=482, Expect=6e-171]} {Smed: dd_Smed_v6_2286_0_1, dd_Smed_v6_2286_0_1, [RH, Score=457, Expect=3e-162]} {RNA1509_49317, RNA1509_55807, RNA1509_56984, RNA1509_8818} {RNA1310_21187.1, RNA1509_49317, RNA1509_55807, RNA1509_56984} {RNA1509_49317, RNA1509_55807, RNA1509_56984, RNA815_4852.1} |
| 2. | MligTC455_21929 | 399 | 8.3 | Mlig455_026091 | Neo: Neoblast, stringent Age: - |
RRM2 | 2.672 | - | - | - | 0.984 | 0.804 | 0.884 | Mlig455_026091 {REF} {Length: 2423} {TRANSSPLICED} {Pfam: Ribonucleotide reductase, small chain [PF00268.23, score=381.6]} {Human: ENSG00000171848, RRM2, ribonucleotide reductase regulatory subunit M2, [RH, Score=529, Expect=0.0]; ENSG00000048392, RRM2B, ribonucleotide reductase regulatory TP53 inducible subunit M2B, [RH, Score=510, Expect=0.0]} {Mouse: ENSMUSG00000020649, Rrm2, ribonucleotide reductase M2, [RH, Score=531, Expect=0.0]; ENSMUSG00000022292, Rrm2b, ribonucleotide reductase M2 B (TP53 inducible), [RH, Score=508, Expect=0.0]} {Dmel: FBgn0011704, RnrS, Ribonucleoside diphosphate reductase small subunit, [RH, Score=531, Expect=0.0]} {Celegans: WBGene00004392, rnr-2, Ribonucleoside-diphosphate reductase small chain, [RH, Score=480, Expect=4e-170]} {Smed: dd_Smed_v6_2286_0_1, dd_Smed_v6_2286_0_1, [RH, Score=457, Expect=3e-162]} {RNA1509_46510, RNA1509_5966, RNA1509_8818} {RNA1310_21187.1, RNA1509_46510, RNA1509_5966, RNA1509_8818} {RNA1509_46510, RNA1509_5966, RNA1509_8818, RNA815_4852.1} |
| 3. | MligTC455_45873 | 262 | 5.45 | Mlig455_025346 | Neo: - Age: logFC(26M/2M)=-0.515 |
DHX15 | 2.541 | 0.744 | - | - | 0.978 | - | 0.819 | Mlig455_025346 {REF} {Length: 3318} {Pfam: Helicase associated domain (HA2) [PF04408.25, score=80.8]; Helicase conserved C-terminal domain [PF00271.33, score=45.2]; DEAD/DEAH box helicase [PF00270.31, score=33.1]; AAA domain [PF13245.8, score=20.3]; AAA domain [PF13401.8, score=19.1]} {Human: ENSG00000109606, DHX15, DEAH-box helicase 15, [Score=989, Expect=0.0]} {Mouse: ENSMUSG00000029169, Dhx15, DEAH (Asp-Glu-Ala-His) box polypeptide 15, [Score=976, Expect=0.0]} {Dmel: FBgn0033160, Dhx15, DEAH-box helicase 15, [Score=974, Expect=0.0]} {Celegans: WBGene00018967, ddx-15, Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15, [Score=901, Expect=0.0]} {Smed: dd_Smed_v6_2043_0_1, dd_Smed_v6_2043_0_1, [Score=1022, Expect=0.0]} {RNA1509_2301} {RNA1310_4345.1} {RNA815_408.2} |
| 4. | MligTC455_34114 | 3928 | 81.84 | Mlig455_026815, Mlig455_030877 | Neo: - Age: logFC(26M/2M)=0.377 Regeneration-upregulated R6: 1.453 Regeneration-enriched R6: 1.453 |
EIF4B | 1.758 | 0.806 | - | - | - | - | 0.952 | Mlig455_026815 {REF} {Length: 3862} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=43.5]} {Human: ENSG00000063046, EIF4B, eukaryotic translation initiation factor 4B, [RH, Score=90.1, Expect=4e-18]} {Mouse: ENSMUSG00000058655, Eif4b, eukaryotic translation initiation factor 4B, [RH, Score=90.1, Expect=3e-18]} {Dmel: FBgn0020660, eIF4B, eukaryotic translation initiation factor 4B, [RH, Score=89.4, Expect=1e-18]} {Smed: dd_Smed_v6_3282_1_1, dd_Smed_v6_3282_1_1, [Score=54.3, Expect=2e-07]} {RNA1509_29122} {RNA1310_2611} {RNA815_2592.1} Mlig455_030877 {REF} {Length: 3839} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=43.7]} {Human: ENSG00000063046, EIF4B, eukaryotic translation initiation factor 4B, [RH, Score=84.3, Expect=2e-18]} {Mouse: ENSMUSG00000058655, Eif4b, eukaryotic translation initiation factor 4B, [Score=65.1, Expect=2e-10]} {Dmel: FBgn0020660, eIF4B, eukaryotic translation initiation factor 4B, [RH, Score=84.7, Expect=3e-17]} {Smed: dd_Smed_v6_3282_1_1, dd_Smed_v6_3282_1_1, [Score=56.2, Expect=4e-08]} {RNA1509_1253} {RNA1310_2611} {RNA815_2592.1} |
| 5. | MligTC455_48018 | 25162 | 524.21 | Mlig455_011850, Mlig455_013128 | Neo: Neoblast, stringent Age: Down-Up-Up Region-enriched R4: 1.366/0.00207 Regeneration-upregulated BL: 1.452 Regeneration-enriched BL: 1.452 |
H1F0 | 1.731 | - | - | - | 0.952 | 0.779 | - | Mlig455_011850 {REF} {Length: 1944} {Pfam: linker histone H1 and H5 family [PF00538.21, score=88.5]} {Human: ENSG00000189060, H1F0, H1 histone family member 0, [Score=63.5, Expect=2e-11]} {Mouse: ENSMUSG00000096210, H1f0, H1 histone family, member 0, [Score=80.5, Expect=1e-17]} {Dmel: FBgn0053855, His1:CG33855, [Score=77.4, Expect=2e-16]} {Celegans: WBGene00001857, hil-6, Putative histone H1.6, [RH, Score=83.2, Expect=5e-19]} {Smed: dd_Smed_v6_10594_0_1, dd_Smed_v6_10594_0_1, [Score=51.2, Expect=9e-08]} {RNA1509_1116, RNA1509_11487, RNA1509_11498, RNA1509_17607, RNA1509_18061, RNA1509_20985, RNA1509_35482, RNA1509_37121} {RNA1310_43462, RNA1509_1116, RNA1509_11487, RNA1509_11498, RNA1509_17607, RNA1509_18061, RNA1509_20985, RNA1509_35482, RNA1509_37121} {RNA1509_1116, RNA1509_11487, RNA1509_11498, RNA1509_17607, RNA1509_18061, RNA1509_20985, RNA1509_35482, RNA1509_37121, RNA815_11387.1} Mlig455_013128 {REF} {Length: 1922} {Pfam: linker histone H1 and H5 family [PF00538.21, score=89.0]} {Human: ENSG00000189060, H1F0, H1 histone family member 0, [Score=63.2, Expect=1e-11]} {Mouse: ENSMUSG00000096210, H1f0, H1 histone family, member 0, [Score=80.9, Expect=2e-18]} {Dmel: FBgn0053825, His1:CG33825, [Score=79.0, Expect=3e-17]} {Celegans: WBGene00001857, hil-6, Putative histone H1.6, [RH, Score=83.6, Expect=1e-19]} {Smed: dd_Smed_v6_601_0_1, dd_Smed_v6_601_0_1, [Score=55.8, Expect=2e-09]} {RNA1509_17607} {RNA1310_43462} {RNA815_11387.1} |
| 6. | MligTC455_42247 | 735 | 15.31 | Mlig455_001440 | Neo: Int S/G2/M Age: - |
1.687 | - | - | 0.712 | - | - | 0.975 | Mlig455_001440 {REF} {Length: 636} {NoTransDecoderORF} {RNA1509_20903} {RNA1310_56887, RNA1509_20903} {RNA1509_20903, RNA815_29235} | |
| 7. | MligTC455_19419 | 546 | 11.37 | Mlig455_007981 | Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 2.360/0.00027 |
0.965 | - | - | - | 0.965 | - | - | Mlig455_007981 {REF} {Length: 2650} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=38.6]} {RNA1509_28433, RNA1509_33646} {RNA1310_17456.1, RNA1509_28433, RNA1509_33646} {RNA1509_28433, RNA1509_33646, RNA815_21443} | |
| 8. | MligTC455_51351 | 116 | 2.43 | Mlig455_040920 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.585 Region-enriched R4: 3.203/0.00816 |
HIST4H4 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_040920 {REF} {Length: 1614} {Pfam: Centromere kinetochore component CENP-T histone fold [PF15511.8, score=33.4]; TATA box binding protein associated factor (TAF) [PF02969.19, score=25.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=23.3]; CENP-S protein [PF15630.8, score=23.3]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=21.2]} {Human: ENSG00000197837, HIST4H4, histone cluster 4 H4, [RH, Score=199, Expect=1e-67]; ENSG00000274618, HIST1H4F, histone cluster 1 H4 family member f, [RH, Score=199, Expect=1e-67]; ENSG00000197238, HIST1H4J, histone cluster 1 H4 family member j, [RH, Score=199, Expect=1e-67]; ENSG00000270882, HIST2H4A, histone cluster 2 H4 family member a, [RH, Score=199, Expect=1e-67]; ENSG00000276180, HIST1H4I, histone cluster 1 H4 family member i, [RH, Score=199, Expect=1e-67]; ENSG00000158406, HIST1H4H, histone cluster 1 H4 family member h, [RH, Score=199, Expect=1e-67]; ENSG00000276966, HIST1H4E, histone cluster 1 H4 family member e, [RH, Score=199, Expect=1e-67]; ENSG00000273542, HIST1H4K, histone cluster 1 H4 family member k, [RH, Score=199, Expect=1e-67]; ENSG00000278637, HIST1H4A, histone cluster 1 H4 family member a, [RH, Score=199, Expect=1e-67]; ENSG00000275126, HIST1H4L, histone cluster 1 H4 family member l, [RH, Score=199, Expect=1e-67]; ENSG00000277157, HIST1H4D, histone cluster 1 H4 family member d, [RH, Score=199, Expect=1e-67]; ENSG00000197061, HIST1H4C, histone cluster 1 H4 family member c, [RH, Score=199, Expect=1e-67]; ENSG00000278705, HIST1H4B, histone cluster 1 H4 family member b, [RH, Score=199, Expect=1e-67]; ENSG00000270276, HIST2H4B, histone cluster 2 H4 family member b, [RH, Score=199, Expect=1e-67]} {Mouse: ENSMUSG00000061482, Hist1h4d, histone cluster 1, H4d, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060639, Hist1h4i, histone cluster 1, H4i, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069266, Hist1h4b, histone cluster 1, H4b, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060981, Hist1h4h, histone cluster 1, H4h, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069306, Hist1h4m, histone cluster 1, H4m, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060678, Hist1h4c, histone cluster 1, H4c, [RH, Score=199, Expect=1e-67]; ENSMUSG00000091405, Hist2h4, histone cluster 2, H4, [RH, Score=199, Expect=1e-67]; ENSMUSG00000096010, Hist4h4, histone cluster 4, H4, [RH, Score=199, Expect=1e-67]; ENSMUSG00000064288, Hist1h4k, histone cluster 1, H4k, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069274, Hist1h4f, histone cluster 1, H4f, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060093, Hist1h4a, histone cluster 1, H4a, [RH, Score=199, Expect=1e-67]; ENSMUSG00000067455, Hist1h4j, histone cluster 1, H4j, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069305, Hist1h4n, histone cluster 1, H4n, [RH, Score=199, Expect=1e-67]} {Dmel: FBgn0013981, His4r, Histone H4 replacement, [RH, Score=197, Expect=2e-67]} {Celegans: WBGene00001920, his-46, Histone H4, [RH, Score=197, Expect=3e-67]} {Smed: dd_Smed_v6_5700_0_1, dd_Smed_v6_5700_0_1, [RH, Score=199, Expect=4e-68]} {RNA1509_21430} {RNA1310_47788.1} {RNA815_23950.1} |
| 9. | MligTC455_50456 | 47 | 0.98 | Mlig455_038262 | Neo: - |
0.958 | - | - | - | 0.958 | - | - | Mlig455_038262 {REF} {Length: 4399} {Pfam: MatE [PF01554.20, score=19.6]} {RNA1509_36146} {RNA1310_87388.1} {RNA815_131.5} | |
| 10. | MligTC455_19418 | 496 | 10.33 | Mlig455_007880 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.599 Region-enriched R5: 2.448/0.00004 |
0.955 | - | - | - | 0.955 | - | - | Mlig455_007880 {REF} {Length: 2364} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=39.4]} {RNA1509_33646} {RNA1310_17456.1} {RNA815_21443} | |
| 11. | MligTC455_52377 | 541 | 11.26 | Mlig455_069932, Mlig455_069939 | Neo: Int S/G2/M Age: - |
0.952 | - | - | - | 0.952 | - | - | Mlig455_069932 {REF} {Length: 1671} {TRANSSPLICED} {RNA1509_41731} {RNA1310_28989} {RNA815_37154} Mlig455_069939 {REF} {Length: 1669} {TRANSSPLICED} {RNA1509_41731} {RNA1310_28989, RNA1509_41731} {RNA1509_41731, RNA815_37154} |
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