Data search
Results for MligTC455_22006
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_22006 | 119 | 2.47 | Mlig455_001286 | Neo: - Age: - |
SLC35D1 | Mlig455_001286 {REF} {Length: 2292} {TRANSSPLICED} {Pfam: Triose-phosphate Transporter family [PF03151.18, score=29.0]} {Human: ENSG00000116704, SLC35D1, solute carrier family 35 member D1, [Score=172, Expect=5e-52]} {Mouse: ENSMUSG00000028521, Slc35d1, solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1, [Score=168, Expect=7e-51]} {Dmel: FBgn0042641, frc, fringe connection, [Score=159, Expect=3e-47]} {Celegans: WBGene00005025, sqv-7, UDP-sugar transporter sqv-7, [Score=147, Expect=4e-43]} {Smed: dd_Smed_v6_14554_0_1, dd_Smed_v6_14554_0_1, [Score=154, Expect=3e-46]} {RNA1310_31362} {RNA815_14367} |
Cumulative graph for MligTC455_22006
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.994 | 2.178 | 0.69045 | 1.00000 | |
| RegionR2 | -0.284 | 2.178 | 0.77891 | 1.00000 | |
| RegionR3 | -0.492 | 2.178 | 0.51043 | 0.99916 | |
| RegionR4 | 0.397 | 2.178 | 0.68504 | 0.97773 | |
| RegionR5 | 0.233 | 2.178 | 0.71640 | 1.00000 | |
| RegionR6 | -0.842 | 2.178 | 0.30067 | 0.89183 | |
| RegionR7 | -0.419 | 2.178 | 0.71511 | 1.00000 | |
| RegionR8 | 0.413 | 2.178 | 0.74748 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.641 | 2.178 | 0.46476 | 1.00000 | |
| RegenerationR2 | 0.764 | 2.178 | 0.31028 | 0.75050 | |
| RegenerationR3 | -0.347 | 2.178 | 0.70433 | 0.94950 | |
| RegenerationR4 | 0.615 | 2.178 | 0.50565 | 0.87206 | |
| RegenerationR5 | 0.388 | 2.178 | 0.59040 | 0.90586 | |
| RegenerationR6 | 0.351 | 2.178 | 0.71816 | 0.93454 | |
| RegenerationBL | 1.464 | 2.178 | 0.15801 | 0.47606 | |
| RegenerationTP | -0.536 | 2.178 | 0.67437 | 1.00000 |
Genes with expression patterns similar to MligTC455_22006
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_22006 | 119 | 2.47 | Mlig455_001286 | Neo: - Age: - |
SLC35D1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_001286 {REF} {Length: 2292} {TRANSSPLICED} {Pfam: Triose-phosphate Transporter family [PF03151.18, score=29.0]} {Human: ENSG00000116704, SLC35D1, solute carrier family 35 member D1, [Score=172, Expect=5e-52]} {Mouse: ENSMUSG00000028521, Slc35d1, solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1, [Score=168, Expect=7e-51]} {Dmel: FBgn0042641, frc, fringe connection, [Score=159, Expect=3e-47]} {Celegans: WBGene00005025, sqv-7, UDP-sugar transporter sqv-7, [Score=147, Expect=4e-43]} {Smed: dd_Smed_v6_14554_0_1, dd_Smed_v6_14554_0_1, [Score=154, Expect=3e-46]} {RNA1310_31362} {RNA815_14367} |
| 2. | MligTC455_18633 | 329 | 6.86 | Mlig455_069502 | Neo: Germline Age: - Region-enriched R4: 2.555/0.00734 |
0.973 | - | - | - | - | 0.973 | - | Mlig455_069502 {REF} {Length: 991} {RNA1509_30220, RNA1509_33475} {RNA1310_1114.1, RNA1509_30220, RNA1509_33475} {RNA1509_30220, RNA1509_33475, RNA815_25133.1} | |
| 3. | MligTC455_46652 | 187 | 3.9 | Mlig455_012309, Mlig455_012329 | Neo: - Age: - |
PCLO | 0.965 | - | - | - | - | 0.965 | - | Mlig455_012309 {REF} {Length: 1702} {RNA1509_29082} {RNA1310_41170.1} Mlig455_012329 {REF} {Length: 1984} {Human: ENSG00000186472, PCLO, piccolo presynaptic cytomatrix protein, [Score=57.0, Expect=5e-09]} {Smed: dd_Smed_v6_1649_0_1, dd_Smed_v6_1649_0_1, [Score=50.4, Expect=8e-08]} {RNA1509_29082} {RNA1310_41170.1} |
| 4. | MligTC455_25276 | 124 | 2.59 | Mlig455_024081 | Neo: - Age: - Region-enriched R4: 3.721/0.04372 |
0.957 | - | - | - | - | - | 0.957 | Mlig455_024081 {REF} {Length: 1384} {TRANSSPLICED} {Pfam: Complex 1 protein (LYR family) [PF05347.17, score=47.3]; Complex1_LYR-like [PF13233.8, score=20.4]} {RNA1509_37248} {RNA1310_65243} {RNA815_33572} | |
| 5. | MligTC455_37213 | 82 | 1.71 | Mlig455_035489 | Neo: - Age: - |
0.957 | - | - | 0.957 | - | - | - | Mlig455_035489 {REF} {Length: 3502} {RNA1509_42371} {RNA1310_12088.1} {RNA815_3483} | |
| 6. | MligTC455_32275 | 190 | 3.96 | Mlig455_053289, Mlig455_053423 | Neo: - Age: - Region-enriched R5: 1.900/0.03332 |
GCNT1 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_053289 {REF} {Length: 2834} {Pfam: Core-2/I-Branching enzyme [PF02485.23, score=121.8]} {Human: ENSG00000187210, GCNT1, glucosaminyl (N-acetyl) transferase 1, core 2, [Score=161, Expect=1e-44]} {Mouse: ENSMUSG00000038843, Gcnt1, glucosaminyl (N-acetyl) transferase 1, core 2, [Score=159, Expect=3e-44]} {Celegans: WBGene00001640, gly-15, GLYcosylation related, [RH, Score=141, Expect=1e-37]} {Smed: dd_Smed_v6_12381_0_1, dd_Smed_v6_12381_0_1, [Score=222, Expect=2e-68]} {RNA1310_20147} {RNA815_33080} Mlig455_053423 {REF} {Length: 3391} {Pfam: Core-2/I-Branching enzyme [PF02485.23, score=91.7]} {Human: ENSG00000187210, GCNT1, glucosaminyl (N-acetyl) transferase 1, core 2, [Score=120, Expect=9e-31]; ENSG00000140297, GCNT3, glucosaminyl (N-acetyl) transferase 3, mucin type, [Score=117, Expect=1e-29]} {Mouse: ENSMUSG00000038843, Gcnt1, glucosaminyl (N-acetyl) transferase 1, core 2, [Score=121, Expect=2e-31]; ENSMUSG00000032226, Gcnt3, glucosaminyl (N-acetyl) transferase 3, mucin type, [Score=115, Expect=3e-29]} {Celegans: WBGene00001626, gly-1, GLY-1; GLYcosylation related, [Score=117, Expect=5e-30]} {Smed: dd_Smed_v6_8413_0_1, dd_Smed_v6_8413_0_1, [Score=176, Expect=7e-54]} {RNA1509_6921} {RNA1310_18449} {RNA815_50015} |
| 7. | MligTC455_17407 | 327 | 6.8 | Mlig455_044727 | Neo: Irradiation Age: - Region-enriched R5: 2.345/0.00045 |
ZNRF2 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_044727 {REF} {Length: 2427} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=39.0]; RING-like zinc finger [PF17123.7, score=26.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=24.9]; RING-type zinc-finger [PF13445.8, score=20.4]} {Human: ENSG00000180233, ZNRF2, zinc and ring finger 2, [RH, Score=145, Expect=8e-42]} {Mouse: ENSMUSG00000058446, Znrf2, zinc and ring finger 2, [RH, Score=147, Expect=8e-43]} {Dmel: FBgn0029911, CG14435, [RH, Score=145, Expect=3e-41]} {Celegans: WBGene00022115, Y71F9AL.10, [RH, Score=144, Expect=4e-42]} {Smed: dd_Smed_v6_2436_0_1, dd_Smed_v6_2436_0_1, [RH, Score=130, Expect=1e-36]} {RNA1509_37305} {RNA1310_28658} {RNA815_2923} |
| 8. | MligTC455_19372 | 108 | 2.25 | Mlig455_040134 | Neo: - Age: - |
0.954 | - | - | - | - | - | 0.954 | Mlig455_040134 {REF} {Length: 760} {NoTransDecoderORF} {RNA1509_49196} {RNA1310_22309.2} {RNA815_54078} | |
| 9. | MligTC455_23451 | 183 | 3.81 | Mlig455_064157 | Neo: - Age: Up-Down-Down |
SRP54 | 0.952 | 0.952 | - | - | - | - | - | Mlig455_064157 {REF} {Length: 2697} {TRANSSPLICED} {Pfam: SRP54-type protein, GTPase domain [PF00448.24, score=243.9]; Signal peptide binding domain [PF02978.21, score=89.0]; SRP54-type protein, helical bundle domain [PF02881.21, score=72.1]; AAA ATPase domain [PF13191.8, score=26.5]; AAA domain [PF13671.8, score=23.7]; Signal recognition particle receptor beta subunit [PF09439.12, score=23.0]; CobQ/CobB/MinD/ParA nucleotide binding domain [PF01656.25, score=22.8]; Zeta toxin [PF06414.14, score=22.1]; AAA domain (dynein-related subfamily) [PF07728.16, score=19.7]; 6-phosphofructo-2-kinase [PF01591.20, score=18.9]; CobW/HypB/UreG, nucleotide-binding domain [PF02492.21, score=18.8]} {Human: ENSG00000100883, SRP54, signal recognition particle 54, [Score=649, Expect=0.0]} {Mouse: ENSMUSG00000112449, Srp54b, signal recognition particle 54B, [Score=650, Expect=0.0]; ENSMUSG00000073079, Srp54a, signal recognition particle 54A, [Score=650, Expect=0.0]; ENSMUSG00000079108, Srp54c, signal recognition particle 54C, [Score=647, Expect=0.0]} {Dmel: FBgn0010747, Srp54k, Signal recognition particle protein 54k, [Score=613, Expect=0.0]} {Celegans: WBGene00009012, F21D5.7, Signal recognition particle 54 kDa protein, [Score=620, Expect=0.0]} {Smed: dd_Smed_v6_2045_1_1, dd_Smed_v6_2045_1_1, [Score=624, Expect=0.0]} {RNA1509_42748} {RNA1310_18797, RNA1509_42748} {RNA1509_42748, RNA815_14281} |
| 10. | MligTC455_49891 | 386 | 8.03 | Mlig455_016073 | Neo: - Age: - Region-enriched R5: 1.569/0.00576 |
SLC44A1 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_016073 {REF} {Length: 4090} {TRANSSPLICED} {Pfam: Plasma-membrane choline transporter [PF04515.14, score=199.3]} {Human: ENSG00000070214, SLC44A1, solute carrier family 44 member 1, [RH, Score=262, Expect=1e-76]} {Mouse: ENSMUSG00000028412, Slc44a1, solute carrier family 44, member 1, [RH, Score=265, Expect=5e-78]} {Dmel: FBgn0035523, Ctl1, Choline transporter-like 1, [RH, Score=258, Expect=4e-75]} {Celegans: WBGene00018037, chtl-1, Choline transporter-like protein 1, [Score=115, Expect=4e-26]} {Smed: dd_Smed_v6_4049_0_1, dd_Smed_v6_4049_0_1, [RH, Score=281, Expect=3e-84]} {RNA1509_16805, RNA1509_42975, RNA1509_57946} {RNA1310_5849, RNA1509_42975, RNA1509_57946} {RNA1509_42975, RNA1509_57946, RNA815_2956.1} |
Berezikov Lab - 2020-2021 © ERIBA