Data search
Results for MligTC455_22022
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_22022 | 155 | 3.23 | Mlig455_012417 | Neo: - Age: - Region-enriched R6: 2.888/0.04077 |
BMI1 | Mlig455_012417 {REF} {Length: 2197} {TRANSSPLICED} {Pfam: RAWUL domain RING finger- and WD40-associated ubiquitin-like [PF16207.7, score=40.8]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=35.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=32.9]; Ring finger domain [PF13639.8, score=24.3]; RING-type zinc-finger [PF13445.8, score=22.5]; zinc-RING finger domain [PF14634.8, score=21.8]; Autophagy protein Atg8 ubiquitin like [PF02991.18, score=19.7]} {Human: ENSG00000168283, BMI1, BMI1 proto-oncogene, polycomb ring finger, [RH, Score=224, Expect=2e-71]; ENSG00000269897, COMMD3-BMI1, COMMD3-BMI1 readthrough, [RH, Score=224, Expect=6e-70]} {Mouse: ENSMUSG00000026739, Bmi1, Bmi1 polycomb ring finger oncogene, [RH, Score=220, Expect=5e-70]} {Dmel: FBgn0005624, Psc, Posterior sex combs, [RH, Score=166, Expect=7e-46]} {Celegans: WBGene00008684, mig-32, [Score=92.8, Expect=6e-21]} {Smed: dd_Smed_v6_12753_0_1, dd_Smed_v6_12753_0_1, [RH, Score=169, Expect=5e-51]} {RNA1509_55682} {RNA1310_23939.1, RNA1509_55682} {RNA1509_55682, RNA815_18976} |
Cumulative graph for MligTC455_22022
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.734 | 2.408 | 0.99964 | 1.00000 | |
| RegionR2 | 2.578 | 2.408 | 0.01707 | 0.13891 | |
| RegionR3 | 0.981 | 2.408 | 0.37981 | 0.91201 | |
| RegionR4 | 1.009 | 2.408 | 0.34279 | 0.66322 | |
| RegionR5 | 2.289 | 2.408 | 0.00938 | 0.05515 | |
| RegionR6 | 2.888 | 2.408 | 0.00109 | 0.04077 | |
| RegionR7 | 2.42 | 2.408 | 0.02231 | 0.27808 | |
| RegionR8 | -5.43 | 2.408 | 0.99951 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.217 | 2.408 | 0.99999 | 1.00000 | |
| RegenerationR2 | -0.789 | 2.408 | 0.14898 | 0.58215 | |
| RegenerationR3 | 0.751 | 2.408 | 0.27314 | 0.70745 | |
| RegenerationR4 | -0.377 | 2.408 | 0.58113 | 0.90556 | |
| RegenerationR5 | -0.37 | 2.408 | 0.50106 | 0.85905 | |
| RegenerationR6 | -0.611 | 2.408 | 0.30448 | 0.65372 | |
| RegenerationBL | -0.791 | 2.408 | 0.90932 | 1.00000 | |
| RegenerationTP | 3.251 | 2.408 | 0.05203 | 0.37332 |
Genes with expression patterns similar to MligTC455_22022
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_22022 | 155 | 3.23 | Mlig455_012417 | Neo: - Age: - Region-enriched R6: 2.888/0.04077 |
BMI1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_012417 {REF} {Length: 2197} {TRANSSPLICED} {Pfam: RAWUL domain RING finger- and WD40-associated ubiquitin-like [PF16207.7, score=40.8]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=35.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=32.9]; Ring finger domain [PF13639.8, score=24.3]; RING-type zinc-finger [PF13445.8, score=22.5]; zinc-RING finger domain [PF14634.8, score=21.8]; Autophagy protein Atg8 ubiquitin like [PF02991.18, score=19.7]} {Human: ENSG00000168283, BMI1, BMI1 proto-oncogene, polycomb ring finger, [RH, Score=224, Expect=2e-71]; ENSG00000269897, COMMD3-BMI1, COMMD3-BMI1 readthrough, [RH, Score=224, Expect=6e-70]} {Mouse: ENSMUSG00000026739, Bmi1, Bmi1 polycomb ring finger oncogene, [RH, Score=220, Expect=5e-70]} {Dmel: FBgn0005624, Psc, Posterior sex combs, [RH, Score=166, Expect=7e-46]} {Celegans: WBGene00008684, mig-32, [Score=92.8, Expect=6e-21]} {Smed: dd_Smed_v6_12753_0_1, dd_Smed_v6_12753_0_1, [RH, Score=169, Expect=5e-51]} {RNA1509_55682} {RNA1310_23939.1, RNA1509_55682} {RNA1509_55682, RNA815_18976} |
| 2. | MligTC455_49540 | 279 | 5.8 | Mlig455_052675 | Neo: - Age: - |
KLHL12 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_052675 {REF} {Length: 3939} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=210.3]; Kelch motif [PF13964.8, score=138.0]; BTB/POZ domain [PF00651.33, score=109.1]; BTB And C-terminal Kelch [PF07707.17, score=75.3]; Galactose oxidase, central domain [PF13418.8, score=75.3]; Kelch motif [PF07646.17, score=69.9]; Galactose oxidase, central domain [PF13415.8, score=67.7]; Kelch motif [PF13854.8, score=36.9]} {Human: ENSG00000117153, KLHL12, kelch like family member 12, [Score=557, Expect=0.0]} {Mouse: ENSMUSG00000026455, Klhl12, kelch-like 12, [Score=558, Expect=0.0]} {Dmel: FBgn0037978, KLHL18, Kelch like family member 18, [Score=338, Expect=5e-109]} {Celegans: WBGene00020030, R12E2.1, [Score=313, Expect=6e-99]} {Smed: dd_Smed_v6_7304_0_1, dd_Smed_v6_7304_0_1, [Score=570, Expect=0.0]} {RNA1509_17800} {RNA1310_5820} {RNA815_4439} |
| 3. | MligTC455_21213 | 212 | 4.41 | Mlig455_026612 | Neo: - Age: - |
0.956 | - | - | - | 0.956 | - | - | Mlig455_026612 {REF} {Length: 3742} {TRANSSPLICED} {RNA1509_42019} {RNA1310_12092.1} {RNA815_16113} | |
| 4. | MligTC455_42058 | 45 | 0.94 | Mlig455_052783 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_052783 {REF} {Length: 1264} {NoTransDecoderORF} {RNA1310_113621} |
Berezikov Lab - 2020-2021 © ERIBA