TomoSeq data search

Data search

Results for MligTC455_22195

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_22195	534	11.12	Mlig455_028650	Neo: Int S/G2/M Age: - Region-enriched R5: 2.351/0.00003	SBDS	Mlig455_028650 {REF} {Length: 1501} {TRANSSPLICED} {Pfam: Shwachman-Bodian-Diamond syndrome (SBDS) protein [PF01172.20, score=109.6]; SBDS protein C-terminal domain [PF09377.12, score=79.7]} {Human: ENSG00000126524, SBDS, SBDS, ribosome maturation factor, [RH, Score=244, Expect=7e-80]} {Mouse: ENSMUSG00000025337, Sbds, SBDS ribosome maturation factor, [RH, Score=246, Expect=1e-80]} {Dmel: FBgn0035714, CG8549, [RH, Score=201, Expect=4e-63]} {Celegans: WBGene00021063, sbds-1, Ribosome maturation protein SBDS, [RH, Score=215, Expect=6e-69]} {Smed: dd_Smed_v6_4125_0_1, dd_Smed_v6_4125_0_1, [RH, Score=196, Expect=6e-60]} {RNA1509_26407, RNA1509_31572} {RNA1310_17464, RNA1509_26407} {RNA1509_26407, RNA815_6193}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_22195

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.553	3.954	0.07115	0.59592
RegionR2	1.334	3.954	0.08116	0.34910
RegionR3	0.952	3.954	0.22023	0.76203
RegionR4	1.404	3.954	0.04921	0.19059
RegionR5	2.351	3.954	0.00000	0.00003
RegionR6	1.606	3.954	0.01151	0.18330
RegionR7	0.378	3.954	0.68092	1.00000
RegionR8	-1.471	3.954	0.99612	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	5.562	3.954	0.25599	0.96756
RegenerationR2	-0.178	3.954	0.59843	0.91508
RegenerationR3	0.214	3.954	0.59135	0.90398
RegenerationR4	0.314	3.954	0.41819	0.82476
RegenerationR5	-0.006	3.954	0.98296	1.00000
RegenerationR6	-0.059	3.954	0.87638	1.00000
RegenerationBL	-0.702	3.954	0.42083	0.78914
RegenerationTP	1.816	3.954	0.01352	0.19866

Genes with expression patterns similar to MligTC455_22195

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_22195	534	11.12	Mlig455_028650	Neo: Int S/G2/M Age: - Region-enriched R5: 2.351/0.00003	SBDS	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_028650 {REF} {Length: 1501} {TRANSSPLICED} {Pfam: Shwachman-Bodian-Diamond syndrome (SBDS) protein [PF01172.20, score=109.6]; SBDS protein C-terminal domain [PF09377.12, score=79.7]} {Human: ENSG00000126524, SBDS, SBDS, ribosome maturation factor, [RH, Score=244, Expect=7e-80]} {Mouse: ENSMUSG00000025337, Sbds, SBDS ribosome maturation factor, [RH, Score=246, Expect=1e-80]} {Dmel: FBgn0035714, CG8549, [RH, Score=201, Expect=4e-63]} {Celegans: WBGene00021063, sbds-1, Ribosome maturation protein SBDS, [RH, Score=215, Expect=6e-69]} {Smed: dd_Smed_v6_4125_0_1, dd_Smed_v6_4125_0_1, [RH, Score=196, Expect=6e-60]} {RNA1509_26407, RNA1509_31572} {RNA1310_17464, RNA1509_26407} {RNA1509_26407, RNA815_6193}
2.	MligTC455_08353	1648	34.34	Mlig455_017215, Mlig455_017227, Mlig455_048178	Neo: - Age: logFC(26M/2M)=0.382 Region-enriched R5: 1.213/0.00826	APEX1, CPTP	1.727	-	-	0.777	-	-	0.950	Mlig455_017215 {REF} {Length: 1946} {Pfam: Glycolipid transfer protein (GLTP) [PF08718.13, score=119.6]} {Human: ENSG00000224051, CPTP, ceramide-1-phosphate transfer protein, [RH, Score=135, Expect=7e-39]} {Mouse: ENSMUSG00000029073, Cptp, ceramide-1-phosphate transfer protein, [RH, Score=134, Expect=2e-38]} {Dmel: FBgn0050392, CG30392, [RH, Score=98.2, Expect=9e-25]} {Celegans: WBGene00018632, tag-296, [RH, Score=110, Expect=7e-29]} {Smed: dd_Smed_v6_4270_0_1, dd_Smed_v6_4270_0_1, [RH, Score=113, Expect=5e-31]} {RNA1509_18178} {RNA1310_20513} {RNA815_20813} Mlig455_017227 {REF} {Length: 2412} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=67.4]; Endonuclease-reverse transcriptase [PF14529.8, score=23.7]} {Human: ENSG00000100823, APEX1, apurinic/apyrimidinic endodeoxyribonuclease 1, [RH, Score=307, Expect=4e-98]} {Mouse: ENSMUSG00000035960, Apex1, apurinic/apyrimidinic endonuclease 1, [RH, Score=311, Expect=1e-99]} {Dmel: FBgn0004584, Rrp1, Recombination repair protein 1, [RH, Score=300, Expect=1e-90]} {Celegans: WBGene00001372, exo-3, DNA-(apurinic or apyrimidinic site) lyase, [RH, Score=240, Expect=2e-73]} {Smed: dd_Smed_v6_11417_0_1, dd_Smed_v6_11417_0_1, [RH, Score=340, Expect=5e-111]} {RNA1509_14089} {RNA1310_25599} {RNA815_11218.1} Mlig455_048178 {REF} {Length: 2334} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=68.1]; Endonuclease-reverse transcriptase [PF14529.8, score=23.0]} {Human: ENSG00000100823, APEX1, apurinic/apyrimidinic endodeoxyribonuclease 1, [RH, Score=301, Expect=5e-96]} {Mouse: ENSMUSG00000035960, Apex1, apurinic/apyrimidinic endonuclease 1, [RH, Score=305, Expect=1e-97]} {Dmel: FBgn0004584, Rrp1, Recombination repair protein 1, [RH, Score=296, Expect=2e-89]} {Celegans: WBGene00001372, exo-3, DNA-(apurinic or apyrimidinic site) lyase, [RH, Score=236, Expect=8e-72]} {Smed: dd_Smed_v6_11417_0_1, dd_Smed_v6_11417_0_1, [RH, Score=334, Expect=4e-109]} {RNA1509_14089} {RNA1310_25599} {RNA815_11218.1}
3.	MligTC455_45030	1694	35.29	Mlig455_017197, Mlig455_048168, Mlig455_048190	Neo: - Age: -		1.717	-	-	-	0.960	-	0.757	Mlig455_017197 {REF} {Length: 3576} {TRANSSPLICED} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=50.6]} {Mouse: ENSMUSG00000036437, Npy1r, neuropeptide Y receptor Y1, [Score=48.1, Expect=1e-05]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=72.4, Expect=2e-13]} {Celegans: WBGene00020586, frpr-18, FLP-2 receptor; FMRFamide Peptide Receptor family, [Score=60.8, Expect=7e-10]} {Smed: dd_Smed_v6_6153_0_1, dd_Smed_v6_6153_0_1, [Score=202, Expect=8e-61]} {RNA1509_16025, RNA1509_25170} {RNA1310_10588.1, RNA1509_25170} {RNA1509_25170, RNA815_16182} Mlig455_048168 {REF} {Length: 2612} {TRANSSPLICED} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=53.5]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=34.3]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=20.6]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=71.6, Expect=3e-13]} {Celegans: WBGene00020586, frpr-18, FLP-2 receptor; FMRFamide Peptide Receptor family, [Score=63.2, Expect=1e-10]} {Smed: dd_Smed_v6_6153_0_1, dd_Smed_v6_6153_0_1, [Score=189, Expect=3e-56]} {RNA1509_16025} {RNA1310_10588.1} {RNA815_16182} Mlig455_048190 {REF} {Length: 2615} {TRANSSPLICED} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=51.4]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=18.5]} {Mouse: ENSMUSG00000036437, Npy1r, neuropeptide Y receptor Y1, [Score=48.1, Expect=1e-05]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=72.4, Expect=2e-13]} {Celegans: WBGene00020586, frpr-18, FLP-2 receptor; FMRFamide Peptide Receptor family, [Score=59.3, Expect=2e-09]} {Smed: dd_Smed_v6_6153_0_1, dd_Smed_v6_6153_0_1, [Score=202, Expect=4e-61]} {RNA1509_16025} {RNA1310_10588.1, RNA1509_16025} {RNA1509_16025, RNA815_16182}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_22195

534

11.12

Mlig455_028650

Neo: Int S/G2/M

Age: -

Region-enriched R5: 2.351/0.00003

SBDS

1.000

MligTC455_08353

1648

34.34

Mlig455_017215, Mlig455_017227, Mlig455_048178

Neo: -

Age: logFC(26M/2M)=0.382

Region-enriched R5: 1.213/0.00826

APEX1, CPTP

1.727

0.777

0.950

Mlig455_017215 {REF} {Length: 1946} {Pfam: Glycolipid transfer protein (GLTP) [PF08718.13, score=119.6]} {Human: ENSG00000224051, CPTP, ceramide-1-phosphate transfer protein, [RH, Score=135, Expect=7e-39]} {Mouse: ENSMUSG00000029073, Cptp, ceramide-1-phosphate transfer protein, [RH, Score=134, Expect=2e-38]} {Dmel: FBgn0050392, CG30392, [RH, Score=98.2, Expect=9e-25]} {Celegans: WBGene00018632, tag-296, [RH, Score=110, Expect=7e-29]} {Smed: dd_Smed_v6_4270_0_1, dd_Smed_v6_4270_0_1, [RH, Score=113, Expect=5e-31]} {RNA1509_18178} {RNA1310_20513} {RNA815_20813}

Mlig455_017227 {REF} {Length: 2412} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=67.4]; Endonuclease-reverse transcriptase [PF14529.8, score=23.7]} {Human: ENSG00000100823, APEX1, apurinic/apyrimidinic endodeoxyribonuclease 1, [RH, Score=307, Expect=4e-98]} {Mouse: ENSMUSG00000035960, Apex1, apurinic/apyrimidinic endonuclease 1, [RH, Score=311, Expect=1e-99]} {Dmel: FBgn0004584, Rrp1, Recombination repair protein 1, [RH, Score=300, Expect=1e-90]} {Celegans: WBGene00001372, exo-3, DNA-(apurinic or apyrimidinic site) lyase, [RH, Score=240, Expect=2e-73]} {Smed: dd_Smed_v6_11417_0_1, dd_Smed_v6_11417_0_1, [RH, Score=340, Expect=5e-111]} {RNA1509_14089} {RNA1310_25599} {RNA815_11218.1}

Mlig455_048178 {REF} {Length: 2334} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=68.1]; Endonuclease-reverse transcriptase [PF14529.8, score=23.0]} {Human: ENSG00000100823, APEX1, apurinic/apyrimidinic endodeoxyribonuclease 1, [RH, Score=301, Expect=5e-96]} {Mouse: ENSMUSG00000035960, Apex1, apurinic/apyrimidinic endonuclease 1, [RH, Score=305, Expect=1e-97]} {Dmel: FBgn0004584, Rrp1, Recombination repair protein 1, [RH, Score=296, Expect=2e-89]} {Celegans: WBGene00001372, exo-3, DNA-(apurinic or apyrimidinic site) lyase, [RH, Score=236, Expect=8e-72]} {Smed: dd_Smed_v6_11417_0_1, dd_Smed_v6_11417_0_1, [RH, Score=334, Expect=4e-109]} {RNA1509_14089} {RNA1310_25599} {RNA815_11218.1}

MligTC455_45030

1694

35.29

Mlig455_017197, Mlig455_048168, Mlig455_048190

Neo: -

Age: -

1.717

0.960

0.757

Mlig455_017197 {REF} {Length: 3576} {TRANSSPLICED} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=50.6]} {Mouse: ENSMUSG00000036437, Npy1r, neuropeptide Y receptor Y1, [Score=48.1, Expect=1e-05]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=72.4, Expect=2e-13]} {Celegans: WBGene00020586, frpr-18, FLP-2 receptor; FMRFamide Peptide Receptor family, [Score=60.8, Expect=7e-10]} {Smed: dd_Smed_v6_6153_0_1, dd_Smed_v6_6153_0_1, [Score=202, Expect=8e-61]} {RNA1509_16025, RNA1509_25170} {RNA1310_10588.1, RNA1509_25170} {RNA1509_25170, RNA815_16182}

Mlig455_048168 {REF} {Length: 2612} {TRANSSPLICED} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=53.5]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=34.3]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=20.6]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=71.6, Expect=3e-13]} {Celegans: WBGene00020586, frpr-18, FLP-2 receptor; FMRFamide Peptide Receptor family, [Score=63.2, Expect=1e-10]} {Smed: dd_Smed_v6_6153_0_1, dd_Smed_v6_6153_0_1, [Score=189, Expect=3e-56]} {RNA1509_16025} {RNA1310_10588.1} {RNA815_16182}

Mlig455_048190 {REF} {Length: 2615} {TRANSSPLICED} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=51.4]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=18.5]} {Mouse: ENSMUSG00000036437, Npy1r, neuropeptide Y receptor Y1, [Score=48.1, Expect=1e-05]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=72.4, Expect=2e-13]} {Celegans: WBGene00020586, frpr-18, FLP-2 receptor; FMRFamide Peptide Receptor family, [Score=59.3, Expect=2e-09]} {Smed: dd_Smed_v6_6153_0_1, dd_Smed_v6_6153_0_1, [Score=202, Expect=4e-61]} {RNA1509_16025} {RNA1310_10588.1, RNA1509_16025} {RNA1509_16025, RNA815_16182}