TomoSeq data search

Data search

Results for MligTC455_22298

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_22298

53

1.11

Mlig455_049908

Neo: -

Age: -

Region-enriched R7: 3.516/0.03382

Mlig455_049908 {REF} {Length: 2118} {NoTransDecoderORF} {RNA1509_26115} {RNA1310_129689} {RNA815_9283.1}

Cumulative graph for MligTC455_22298

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.898	1.225	0.72710	1.00000
RegionR2	-0.838	1.225	0.98064	1.00000
RegionR3	-0.514	1.225	0.95718	1.00000
RegionR4	0.549	1.225	0.67427	0.97007
RegionR5	-2.391	1.225	1.00000	1.00000
RegionR6	-1.394	1.225	0.99614	1.00000
RegionR7	3.516	1.225	0.00096	0.03382
RegionR8	2.971	1.225	0.04983	0.43817

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.465	1.225	0.85192	1.00000
RegenerationR2	0.65	1.225	0.51674	0.87831
RegenerationR3	-0.48	1.225	0.68292	0.94125
RegenerationR4	-1.791	1.225	0.14591	0.57172
RegenerationR5	1.214	1.225	0.29886	0.72606
RegenerationR6	-0.708	1.225	0.63885	0.89242
RegenerationBL	-0.164	1.225	0.86006	1.00000
RegenerationTP	-4.069	1.225	0.00659	0.13710

Genes with expression patterns similar to MligTC455_22298

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_22298	53	1.11	Mlig455_049908	Neo: - Age: - Region-enriched R7: 3.516/0.03382		3	1.000	1.000	-	-	1.000	-	Mlig455_049908 {REF} {Length: 2118} {NoTransDecoderORF} {RNA1509_26115} {RNA1310_129689} {RNA815_9283.1}
2.	MligTC455_07668	37	0.78	Mlig455_051218	Neo: - Age: -	LRG1	0.991	0.991	-	-	-	-	-	Mlig455_051218 {REF} {Length: 1983} {Pfam: Leucine rich repeat [PF13855.8, score=58.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=35.9]; Leucine Rich Repeat [PF00560.35, score=20.3]} {Human: ENSG00000171236, LRG1, leucine rich alpha-2-glycoprotein 1, [Score=62.8, Expect=3e-10]} {Mouse: ENSMUSG00000037095, Lrg1, leucine-rich alpha-2-glycoprotein 1, [Score=56.6, Expect=2e-08]; ENSMUSG00000052316, Lrrc15, leucine rich repeat containing 15, [Score=53.9, Expect=2e-07]} {Dmel: FBgn0262473, Tl, Toll, [Score=57.4, Expect=2e-08]} {Celegans: WBGene00006593, tol-1, TOLl (Drosophila) family, [Score=60.1, Expect=2e-09]} {RNA1310_98686}
3.	MligTC455_53509	51	1.05	Mlig455_039905	Neo: - Age: Up-Down-Up Region-enriched R7: 5.487/0.00010 Region-enriched R2: 3.991/0.02985	KREMEN1	0.982	0.982	-	-	-	-	-	Mlig455_039905 {REF} {Length: 4459} {Pfam: WSC domain [PF01822.21, score=601.0]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=65.1, Expect=6e-10]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=65.1, Expect=4e-10]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=69.3, Expect=2e-11]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=50.4, Expect=1e-05]} {RNA1509_15008} {RNA1310_9885} {RNA815_22574}
4.	MligTC455_07669	60	1.26	Mlig455_063001	Neo: - Age: -	LRG1	0.977	0.977	-	-	-	-	-	Mlig455_063001 {REF} {Length: 2041} {Pfam: Leucine rich repeat [PF13855.8, score=55.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=33.0]} {Human: ENSG00000171236, LRG1, leucine rich alpha-2-glycoprotein 1, [Score=62.0, Expect=6e-10]; ENSG00000040608, RTN4R, reticulon 4 receptor, [Score=58.9, Expect=1e-08]} {Mouse: ENSMUSG00000052316, Lrrc15, leucine rich repeat containing 15, [Score=52.8, Expect=5e-07]; ENSMUSG00000043496, Tril, TLR4 interactor with leucine-rich repeats, [Score=52.0, Expect=1e-06]} {Dmel: FBgn0262473, Tl, Toll, [Score=57.0, Expect=3e-08]} {Celegans: WBGene00006593, tol-1, TOLl (Drosophila) family, [Score=59.3, Expect=3e-09]} {RNA1310_98686}
5.	MligTC455_25785	47	0.97	Mlig455_046276	Neo: - Age: -		0.973	0.973	-	-	-	-	-	Mlig455_046276 {REF} {Length: 1627} {RNA1509_22707} {RNA1310_33596.2} {RNA815_24119.2}
6.	MligTC455_15755	62	1.3	Mlig455_051284	Neo: - Age: - Region-enriched R7: 4.959/0.00065	CHRNB3	0.971	0.971	-	-	-	-	-	Mlig455_051284 {REF} {Length: 2666} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=130.4]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=32.4]} {Human: ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=142, Expect=1e-37]; ENSG00000169684, CHRNA5, cholinergic receptor nicotinic alpha 5 subunit, [Score=139, Expect=2e-36]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=137, Expect=1e-35]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=160, Expect=5e-44]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=146, Expect=9e-39]} {Celegans: WBGene00020048, lgc-12, Ligand-Gated ion Channel, [Score=140, Expect=2e-37]} {Smed: dd_Smed_v6_29533_0_1, dd_Smed_v6_29533_0_1, [RH, Score=205, Expect=1e-61]} {RNA1310_22037} {RNA815_37244}
7.	MligTC455_30812	30	0.62	Mlig455_062785	Neo: Irradiation Age: Down-Up-Down		0.968	0.968	-	-	-	-	-	Mlig455_062785 {REF} {Length: 4754} {RNA1509_43288} {RNA1310_42797} {RNA815_22641}
8.	MligTC455_42815	109	2.26	Mlig455_021685	Neo: - Age: - Region-enriched R7: 3.999/0.00913		0.968	0.968	-	-	-	-	-	Mlig455_021685 {REF} {Length: 1923} {RNA1310_28094}
9.	MligTC455_09240	297	6.19	Mlig455_023411	Neo: - Age: Down-Up-Down Region-enriched R7: 5.816/0.00000 Region-enriched R8: 5.505/0.00000 Region-enriched R6: 2.871/0.00709		0.966	0.966	-	-	-	-	-	Mlig455_023411 {REF} {Length: 2218} {RNA1509_41055} {RNA1310_11481.1} {RNA815_19026}
10.	MligTC455_15983	668	13.92	Mlig455_018780, Mlig455_018950	Neo: - Age: Up-Down-Down Region-enriched R8: 4.299/0.00000 Region-enriched R7: 3.889/0.00000		0.966	0.966	-	-	-	-	-	Mlig455_018780 {REF} {Length: 1496} {RNA1509_47436} {RNA1310_22809.1} {RNA815_49713} Mlig455_018950 {REF} {Length: 1264} {RNA1509_47436} {RNA1310_22809.1, RNA1509_47436} {RNA1509_47436, RNA815_49713}
11.	MligTC455_04420	209	4.36	Mlig455_005696	Neo: - Age: - Region-enriched R7: 3.482/0.00030 Region-enriched R8: 3.068/0.04709 Region-enriched R3: 2.252/0.02328		0.963	0.963	-	-	-	-	-	Mlig455_005696 {REF} {Length: 2113} {Pfam: Major Facilitator Superfamily [PF07690.18, score=68.2]; PUCC protein [PF03209.17, score=38.1]; MFS/sugar transport protein [PF13347.8, score=25.9]; MFS_1 like family [PF12832.9, score=24.5]} {Smed: dd_Smed_v6_8550_0_1, dd_Smed_v6_8550_0_1, [Score=388, Expect=2e-131]} {RNA1509_18256} {RNA1310_12968} {RNA815_5192}
12.	MligTC455_51024	78	1.63	Mlig455_042673	Neo: - Age: - Region-enriched R8: 6.900/0.00001 Region-enriched R7: 6.240/0.00000 Region-enriched R6: 2.978/0.04172		0.961	0.961	-	-	-	-	-	Mlig455_042673 {REF} {Length: 1953} {RNA1310_20305} {RNA815_32236}
13.	MligTC455_08906	71	1.47	Mlig455_013161	Neo: - Age: -		0.959	0.959	-	-	-	-	-	Mlig455_013161 {REF} {Length: 694}
14.	MligTC455_04421	629	13.1	Mlig455_008660, Mlig455_008671	Neo: - Age: - Region-enriched R8: 2.627/0.01190 Region-enriched R7: 2.553/0.00144 Region-enriched R3: 2.011/0.01226		0.957	0.957	-	-	-	-	-	Mlig455_008660 {REF} {Length: 2329} {Pfam: Major Facilitator Superfamily [PF07690.18, score=85.4]; MFS/sugar transport protein [PF13347.8, score=44.4]; MFS_1 like family [PF12832.9, score=35.8]; PUCC protein [PF03209.17, score=34.8]} {Smed: dd_Smed_v6_8550_0_1, dd_Smed_v6_8550_0_1, [RH, Score=471, Expect=4e-162]} {RNA1509_18256} {RNA1310_12968} {RNA815_5192} Mlig455_008671 {REF} {Length: 2325} {Pfam: Major Facilitator Superfamily [PF07690.18, score=83.3]; MFS/sugar transport protein [PF13347.8, score=44.8]; MFS_1 like family [PF12832.9, score=35.3]; PUCC protein [PF03209.17, score=34.7]} {Smed: dd_Smed_v6_8550_0_1, dd_Smed_v6_8550_0_1, [RH, Score=468, Expect=1e-160]} {RNA1509_18256} {RNA1310_12968, RNA1509_18256} {RNA1509_18256, RNA815_5192}
15.	MligTC455_22230	170	3.54	Mlig455_013703, Mlig455_013720	Neo: - Age: Down-Up-Down Region-enriched R8: 5.137/0.00004 Region-enriched R7: 5.134/0.00000 Region-enriched R6: 3.126/0.00746		0.953	0.953	-	-	-	-	-	Mlig455_013703 {REF} {Length: 2025} {RNA1509_49155} {RNA1310_23836, RNA1509_49155} {RNA1509_49155, RNA815_28676} Mlig455_013720 {REF} {Length: 2031} {RNA1509_49155} {RNA1310_23836} {RNA815_28676}
16.	MligTC455_31615	336	7	Mlig455_042153, Mlig455_065866	Neo: - Age: -	USP5	0.953	-	-	-	-	0.953	-	Mlig455_042153 {REF} {Length: 1274} {TRANSSPLICED} {Pfam: Zn-finger in ubiquitin-hydrolases and other protein [PF02148.21, score=61.6]} {Human: ENSG00000111667, USP5, ubiquitin specific peptidase 5, [Score=211, Expect=2e-64]} {Mouse: ENSMUSG00000038429, Usp5, ubiquitin specific peptidase 5 (isopeptidase T), [Score=209, Expect=4e-64]} {Dmel: FBgn0035402, Usp5, Ubiquitin specific protease 5, [Score=200, Expect=6e-61]} {Celegans: WBGene00020839, usp-5, Ubiquitinyl hydrolase 1, [Score=119, Expect=2e-32]} {Smed: dd_Smed_v6_3655_0_1, dd_Smed_v6_3655_0_1, [Score=185, Expect=2e-58]} {RNA1509_20040} {RNA1310_16514.1} {RNA815_39489} Mlig455_065866 {REF} {Length: 2979} {TRANSSPLICED} {Pfam: Squalene/phytoene synthase [PF00494.21, score=103.7]; Zn-finger in ubiquitin-hydrolases and other protein [PF02148.21, score=58.7]} {Human: ENSG00000111667, USP5, ubiquitin specific peptidase 5, [Score=208, Expect=9e-59]} {Mouse: ENSMUSG00000038429, Usp5, ubiquitin specific peptidase 5 (isopeptidase T), [Score=207, Expect=2e-58]} {Dmel: FBgn0035402, Usp5, Ubiquitin specific protease 5, [Score=199, Expect=1e-55]} {Celegans: WBGene00020839, usp-5, Ubiquitinyl hydrolase 1, [Score=122, Expect=2e-29]} {Smed: dd_Smed_v6_3655_0_1, dd_Smed_v6_3655_0_1, [Score=182, Expect=6e-53]} {RNA1509_48859} {RNA1310_18155} {RNA815_13377}
17.	MligTC455_17669	56	1.17	Mlig455_040975	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_040975 {REF} {Length: 640} {NoTransDecoderORF} {RNA1310_35779} {RNA815_55972}
18.	MligTC455_17893	38	0.78	Mlig455_039260, Mlig455_039285	Neo: - Age: -	TCTEX1D1	0.95	-	-	-	-	0.950	-	Mlig455_039260 {REF} {Length: 949} {TRANSSPLICED} {Pfam: Tctex-1 family [PF03645.15, score=71.5]} {Human: ENSG00000152760, TCTEX1D1, Tctex1 domain containing 1, [Score=112, Expect=7e-31]} {Mouse: ENSMUSG00000028523, Tctex1d1, Tctex1 domain containing 1, [Score=117, Expect=4e-33]} {Dmel: FBgn0037773, CG5359, [Score=57.8, Expect=1e-10]} {Smed: dd_Smed_v6_9321_0_2, dd_Smed_v6_9321_0_2, [Score=135, Expect=1e-40]} {RNA1509_51730} {RNA1310_15486.2} {RNA815_14273} Mlig455_039285 {REF} {Length: 951} {TRANSSPLICED} {Pfam: Tctex-1 family [PF03645.15, score=71.5]} {Human: ENSG00000152760, TCTEX1D1, Tctex1 domain containing 1, [Score=112, Expect=7e-31]} {Mouse: ENSMUSG00000028523, Tctex1d1, Tctex1 domain containing 1, [Score=114, Expect=5e-32]} {Dmel: FBgn0037773, CG5359, [Score=57.8, Expect=1e-10]} {Smed: dd_Smed_v6_9321_0_2, dd_Smed_v6_9321_0_2, [Score=135, Expect=1e-40]} {RNA1509_51730} {RNA1310_15486.2, RNA1509_51730} {RNA1509_51730, RNA815_14273}

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