TomoSeq data search

Data search

Results for MligTC455_22355

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_22355

1582

32.96

Mlig455_021676, Mlig455_021722

Neo: -

Age: logFC(26M/2M)=-0.194

EPB41L5

Mlig455_021676 {REF} {Length: 4210} {Pfam: FERM C-terminal PH-like domain [PF09380.12, score=70.6]; FERM N-terminal domain [PF09379.12, score=48.4]; FERM central domain [PF00373.20, score=39.5]} {Human: ENSG00000115109, EPB41L5, erythrocyte membrane protein band 4.1 like 5, [Score=321, Expect=1e-97]; ENSG00000095203, EPB41L4B, erythrocyte membrane protein band 4.1 like 4B, [Score=320, Expect=7e-96]} {Mouse: ENSMUSG00000028434, Epb41l4b, erythrocyte membrane protein band 4.1 like 4b, [Score=322, Expect=6e-97]; ENSMUSG00000026383, Epb41l5, erythrocyte membrane protein band 4.1 like 5, [Score=318, Expect=5e-97]} {Dmel: FBgn0004049, yrt, yurt, [Score=369, Expect=5e-114]} {Celegans: WBGene00001489, frm-2, FERM domain (Protein4.1-ezrin-radixin-moesin) family, [Score=308, Expect=3e-95]} {Smed: dd_Smed_v6_4114_0_1, dd_Smed_v6_4114_0_1, [RH, Score=344, Expect=8e-109]} {RNA1509_8304} {RNA1310_6124.1} {RNA815_5737}

Mlig455_021722 {REF} {Length: 4213} {Pfam: FERM C-terminal PH-like domain [PF09380.12, score=70.5]; FERM N-terminal domain [PF09379.12, score=48.4]; FERM central domain [PF00373.20, score=39.5]} {Human: ENSG00000115109, EPB41L5, erythrocyte membrane protein band 4.1 like 5, [Score=320, Expect=1e-97]; ENSG00000095203, EPB41L4B, erythrocyte membrane protein band 4.1 like 4B, [Score=320, Expect=5e-96]} {Mouse: ENSMUSG00000028434, Epb41l4b, erythrocyte membrane protein band 4.1 like 4b, [Score=322, Expect=7e-97]; ENSMUSG00000026383, Epb41l5, erythrocyte membrane protein band 4.1 like 5, [Score=318, Expect=5e-97]} {Dmel: FBgn0004049, yrt, yurt, [Score=368, Expect=5e-114]} {Celegans: WBGene00001489, frm-2, FERM domain (Protein4.1-ezrin-radixin-moesin) family, [Score=308, Expect=4e-95]} {Smed: dd_Smed_v6_4114_0_1, dd_Smed_v6_4114_0_1, [RH, Score=343, Expect=2e-108]} {RNA1509_8304} {RNA1310_6124.1} {RNA815_5737}

Cumulative graph for MligTC455_22355

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.752	5.18	0.02195	0.40367
RegionR2	0.055	5.18	0.91142	1.00000
RegionR3	-0.215	5.18	0.63364	1.00000
RegionR4	0.712	5.18	0.15932	0.41583
RegionR5	0.572	5.18	0.15996	0.42076
RegionR6	0.432	5.18	0.31328	0.90229
RegionR7	0.752	5.18	0.08809	0.56902
RegionR8	0.442	5.18	0.39047	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.272	5.18	0.47218	1.00000
RegenerationR2	-0.172	5.18	0.72176	0.96308
RegenerationR3	0.02	5.18	0.97012	1.00000
RegenerationR4	-0.382	5.18	0.46036	0.84758
RegenerationR5	-0.929	5.18	0.05778	0.38360
RegenerationR6	0.07	5.18	0.88700	1.00000
RegenerationBL	-0.028	5.18	0.95317	1.00000
RegenerationTP	-0.317	5.18	0.53529	0.92342

Genes with expression patterns similar to MligTC455_22355

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_22355	1582	32.96	Mlig455_021676, Mlig455_021722	Neo: - Age: logFC(26M/2M)=-0.194	EPB41L5	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_021676 {REF} {Length: 4210} {Pfam: FERM C-terminal PH-like domain [PF09380.12, score=70.6]; FERM N-terminal domain [PF09379.12, score=48.4]; FERM central domain [PF00373.20, score=39.5]} {Human: ENSG00000115109, EPB41L5, erythrocyte membrane protein band 4.1 like 5, [Score=321, Expect=1e-97]; ENSG00000095203, EPB41L4B, erythrocyte membrane protein band 4.1 like 4B, [Score=320, Expect=7e-96]} {Mouse: ENSMUSG00000028434, Epb41l4b, erythrocyte membrane protein band 4.1 like 4b, [Score=322, Expect=6e-97]; ENSMUSG00000026383, Epb41l5, erythrocyte membrane protein band 4.1 like 5, [Score=318, Expect=5e-97]} {Dmel: FBgn0004049, yrt, yurt, [Score=369, Expect=5e-114]} {Celegans: WBGene00001489, frm-2, FERM domain (Protein4.1-ezrin-radixin-moesin) family, [Score=308, Expect=3e-95]} {Smed: dd_Smed_v6_4114_0_1, dd_Smed_v6_4114_0_1, [RH, Score=344, Expect=8e-109]} {RNA1509_8304} {RNA1310_6124.1} {RNA815_5737} Mlig455_021722 {REF} {Length: 4213} {Pfam: FERM C-terminal PH-like domain [PF09380.12, score=70.5]; FERM N-terminal domain [PF09379.12, score=48.4]; FERM central domain [PF00373.20, score=39.5]} {Human: ENSG00000115109, EPB41L5, erythrocyte membrane protein band 4.1 like 5, [Score=320, Expect=1e-97]; ENSG00000095203, EPB41L4B, erythrocyte membrane protein band 4.1 like 4B, [Score=320, Expect=5e-96]} {Mouse: ENSMUSG00000028434, Epb41l4b, erythrocyte membrane protein band 4.1 like 4b, [Score=322, Expect=7e-97]; ENSMUSG00000026383, Epb41l5, erythrocyte membrane protein band 4.1 like 5, [Score=318, Expect=5e-97]} {Dmel: FBgn0004049, yrt, yurt, [Score=368, Expect=5e-114]} {Celegans: WBGene00001489, frm-2, FERM domain (Protein4.1-ezrin-radixin-moesin) family, [Score=308, Expect=4e-95]} {Smed: dd_Smed_v6_4114_0_1, dd_Smed_v6_4114_0_1, [RH, Score=343, Expect=2e-108]} {RNA1509_8304} {RNA1310_6124.1} {RNA815_5737}
2.	MligTC455_34119	362	7.55	Mlig455_048589, Mlig455_048669	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.585 Region-enriched R7: 2.341/0.00080	ANGPT4	1.905	-	-	-	0.946	-	0.959	Mlig455_048589 {REF} {Length: 2801} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=82.9]} {Human: ENSG00000101280, ANGPT4, angiopoietin 4, [Score=75.5, Expect=1e-13]} {Mouse: ENSMUSG00000033860, Fgg, fibrinogen gamma chain, [Score=72.4, Expect=7e-13]; ENSMUSG00000026835, Fcnb, ficolin B, [Score=70.5, Expect=6e-13]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=68.9, Expect=1e-11]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=68.9, Expect=1e-11]} {Dmel: FBgn0003326, sca, scabrous, [Score=67.0, Expect=5e-11]} {RNA1509_45532} {RNA1310_12662} {RNA815_4426} Mlig455_048669 {REF} {Length: 2277} {RNA1509_45532} {RNA1310_12662} {RNA815_4426}
3.	MligTC455_51502	413	8.6	Mlig455_061320	Neo: - Age: logFC(26M/2M)=0.490		1.826	-	-	-	0.963	-	0.863	Mlig455_061320 {REF} {Length: 3867} {RNA1509_18023} {RNA1310_4715.1} {RNA815_16390}
4.	MligTC455_53096	1330	27.71	Mlig455_068899	Neo: - Age: Down-Up-Down	SEC14L2	1.729	-	-	-	0.971	-	0.758	Mlig455_068899 {REF} {Length: 1803} {Pfam: CRAL/TRIO domain [PF00650.22, score=99.2]; Golgi-dynamics membrane-trafficking [PF13897.8, score=36.4]} {Human: ENSG00000100003, SEC14L2, SEC14 like lipid binding 2, [RH, Score=278, Expect=1e-89]; ENSG00000133488, SEC14L4, SEC14 like lipid binding 4, [RH, Score=269, Expect=4e-86]; ENSG00000100012, SEC14L3, SEC14 like lipid binding 3, [RH, Score=266, Expect=6e-85]} {Mouse: ENSMUSG00000003585, Sec14l2, SEC14-like lipid binding 2, [RH, Score=277, Expect=2e-89]} {Dmel: FBgn0035146, CG13893, [RH, Score=190, Expect=5e-56]} {Celegans: WBGene00019268, H41C03.1, [RH, Score=119, Expect=1e-29]} {Smed: dd_Smed_v6_11513_1_1, dd_Smed_v6_11513_1_1, [RH, Score=282, Expect=3e-92]} {RNA1509_13482} {RNA1310_16456, RNA1509_13482} {RNA1509_13482, RNA815_6612}
5.	MligTC455_27639	341	7.1	Mlig455_022965	Neo: - Age: logFC(26M/2M)=-0.430	CLUAP1	1.712	-	-	-	0.762	-	0.950	Mlig455_022965 {REF} {Length: 2072} {Pfam: Clusterin-associated protein-1 [PF10234.11, score=358.0]} {Human: ENSG00000103351, CLUAP1, clusterin associated protein 1, [RH, Score=332, Expect=1e-110]} {Mouse: ENSMUSG00000014232, Cluap1, clusterin associated protein 1, [RH, Score=330, Expect=8e-110]} {Dmel: FBgn0031196, CG17599, [RH, Score=135, Expect=1e-34]} {Celegans: WBGene00001119, dyf-3, Clusterin-associated protein 1 homolog, [RH, Score=215, Expect=1e-65]} {Smed: dd_Smed_v6_8287_0_1, dd_Smed_v6_8287_0_1, [RH, Score=333, Expect=2e-110]} {RNA1509_12489, RNA1509_14292} {RNA1310_15979, RNA1509_12489} {RNA1509_12489, RNA815_6417.1}
6.	MligTC455_22968	602	12.54	Mlig455_025411	Neo: Int S/G2/M Age: Up-Down-Down	NCK2	1.707	-	-	-	-	0.960	0.747	Mlig455_025411 {REF} {Length: 3901} {TRANSSPLICED} {Pfam: SH3 domain [PF00018.30, score=149.7]; Variant SH3 domain [PF14604.8, score=137.1]; Variant SH3 domain [PF07653.19, score=83.1]; SH2 domain [PF00017.26, score=58.0]; Bacterial SH3 domain [PF08239.13, score=33.5]; SH3 domain [PF17902.3, score=28.6]; Bacterial dipeptidyl-peptidase Sh3 domain [PF18348.3, score=18.3]} {Human: ENSG00000071051, NCK2, NCK adaptor protein 2, [RH, Score=226, Expect=1e-68]} {Mouse: ENSMUSG00000032475, Nck1, non-catalytic region of tyrosine kinase adaptor protein 1, [Score=165, Expect=1e-45]} {Dmel: FBgn0010583, dock, dreadlocks, [Score=129, Expect=2e-32]} {Celegans: WBGene00006410, nck-1, NCK (Non-Catalytic region of tyrosine Kinase) adaptor protein family, [Score=220, Expect=2e-66]} {Smed: dd_Smed_v6_4816_0_2, dd_Smed_v6_4816_0_2, [Score=214, Expect=6e-62]} {RNA1509_17077, RNA1509_34846, RNA1509_41244} {RNA1310_9858, RNA1509_34846, RNA1509_41244} {RNA1509_34846, RNA1509_41244, RNA815_11879}
7.	MligTC455_25497	257	5.35	Mlig455_021585	Neo: - Age: -		0.971	-	-	-	-	0.971	-	Mlig455_021585 {REF} {Length: 694} {NoTransDecoderORF} {RNA1509_24913, RNA1509_47081, RNA1509_55124, RNA1509_58789} {RNA1310_32307.1, RNA1509_24913, RNA1509_47081, RNA1509_55124, RNA1509_58789} {RNA1509_24913, RNA1509_47081, RNA1509_55124, RNA1509_58789, RNA815_996.1}
8.	MligTC455_24134	222	4.63	Mlig455_032958	Neo: - Age: - Region-enriched R5: 1.728/0.03718		0.963	-	-	-	0.963	-	-	Mlig455_032958 {REF} {Length: 4207} {TRANSSPLICED} {Pfam: Autophagy-related protein 13 [PF10033.11, score=33.0]} {Dmel: FBgn0261108, Atg13, Autophagy-related 13, [Score=62.4, Expect=3e-10]} {Smed: dd_Smed_v6_4306_0_1, dd_Smed_v6_4306_0_1, [RH, Score=83.2, Expect=2e-17]} {RNA1509_53407} {RNA1310_19264} {RNA815_25372}
9.	MligTC455_25726	567	11.81	Mlig455_008842	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_008842 {REF} {Length: 4919} {TRANSSPLICED} {Smed: dd_Smed_v6_2540_0_1, dd_Smed_v6_2540_0_1, [Score=49.3, Expect=2e-07]} {RNA1509_31649, RNA1509_58559} {RNA1310_39518, RNA1509_31649, RNA1509_58559} {RNA1509_31649, RNA1509_58559, RNA815_22089.1}
10.	MligTC455_09206	431	8.98	Mlig455_019452	Neo: - Age: Down-Up-Down	ANGPTL2	0.958	-	-	-	0.958	-	-	Mlig455_019452 {REF} {Length: 1549} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=122.0]} {Human: ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=113, Expect=4e-27]; ENSG00000120332, TNN, tenascin N, [Score=113, Expect=1e-26]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=110, Expect=4e-26]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=118, Expect=3e-28]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=114, Expect=2e-27]} {Dmel: FBgn0051832, CG31832, [Score=89.7, Expect=2e-20]} {Celegans: WBGene00017013, ensh-1, [RH, Score=64.3, Expect=4e-11]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=98.2, Expect=4e-22]} {RNA1509_5879, RNA1509_59197} {RNA1310_25624.2, RNA1509_59197} {RNA1509_59197, RNA815_10978}
11.	MligTC455_53436	493	10.27	Mlig455_029525	Neo: - Age: -	MAP3K20	0.956	-	-	-	-	-	0.956	Mlig455_029525 {REF} {Length: 2610} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=203.7]; Protein kinase domain [PF00069.27, score=172.7]; SAM domain (Sterile alpha motif) [PF00536.32, score=33.6]; SAM domain (Sterile alpha motif) [PF07647.19, score=30.1]} {Human: ENSG00000091436, MAP3K20, mitogen-activated protein kinase kinase kinase 20, [RH, Score=324, Expect=2e-98]} {Mouse: ENSMUSG00000004085, Map3k20, mitogen-activated protein kinase kinase kinase 20, [RH, Score=321, Expect=1e-97]} {Dmel: FBgn0036896, wnd, wallenda, [Score=201, Expect=1e-53]} {Celegans: WBGene00006971, zak-1, Mammalian ZAK kinase homolog, [RH, Score=252, Expect=1e-72]} {Smed: dd_Smed_v6_8838_0_1, dd_Smed_v6_8838_0_1, [Score=173, Expect=8e-45]} {RNA1509_14355} {RNA1310_6214.2} {RNA815_4745}
12.	MligTC455_23171	303	6.31	Mlig455_004997	Neo: - Age: Up-Down-Down	GRIA2	0.954	-	-	-	-	-	0.954	Mlig455_004997 {REF} {Length: 2499} {TRANSSPLICED} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=89.2]; Ligand-gated ion channel [PF00060.28, score=67.1]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=55.5]} {Human: ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=135, Expect=3e-35]; ENSG00000155511, GRIA1, glutamate ionotropic receptor AMPA type subunit 1, [Score=134, Expect=7e-35]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [Score=130, Expect=1e-33]} {Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=135, Expect=2e-35]; ENSMUSG00000020524, Gria1, glutamate receptor, ionotropic, AMPA1 (alpha 1), [Score=134, Expect=5e-35]; ENSMUSG00000001986, Gria3, glutamate receptor, ionotropic, AMPA3 (alpha 3), [Score=130, Expect=8e-34]} {Dmel: FBgn0031634, Ir25a, Ionotropic receptor 25a, [Score=110, Expect=5e-27]} {Celegans: WBGene00001617, glr-6, GLutamate Receptor family (AMPA), [Score=106, Expect=1e-25]} {Smed: dd_Smed_v6_7562_0_1, dd_Smed_v6_7562_0_1, [Score=129, Expect=1e-33]} {RNA1509_11251} {RNA1310_13034} {RNA815_2128.1}
13.	MligTC455_47324	117	2.44	Mlig455_035806	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.510	KCNC1	0.953	-	-	-	-	-	0.953	Mlig455_035806 {REF} {Length: 3022} {Pfam: Ion transport protein [PF00520.33, score=152.0]; BTB/POZ domain [PF02214.24, score=100.3]; Ion channel [PF07885.18, score=44.8]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [RH, Score=427, Expect=7e-142]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [RH, Score=426, Expect=2e-141]; ENSG00000131398, KCNC3, potassium voltage-gated channel subfamily C member 3, [RH, Score=406, Expect=2e-131]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [RH, Score=406, Expect=4e-133]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [RH, Score=428, Expect=3e-142]; ENSMUSG00000062785, Kcnc3, potassium voltage gated channel, Shaw-related subfamily, member 3, [RH, Score=412, Expect=7e-134]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [RH, Score=411, Expect=6e-135]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [RH, Score=712, Expect=0.0]} {Celegans: WBGene00008819, shw-1, SHaW family of potassium channels, [RH, Score=598, Expect=0.0]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [RH, Score=681, Expect=0.0]} {RNA1509_44896} {RNA1310_19148} {RNA815_2283.1}
14.	MligTC455_32099	262	5.47	Mlig455_009675	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.587		0.951	-	-	-	-	-	0.951	Mlig455_009675 {REF} {Length: 3336} {RNA1509_32552} {RNA1310_22318, RNA1509_32552} {RNA1509_32552, RNA815_9516}
15.	MligTC455_53166	216	4.5	Mlig455_040159	Neo: - Age: -	PCDH9	0.951	-	-	-	-	-	0.951	Mlig455_040159 {REF} {Length: 4572} {Pfam: Cadherin domain [PF00028.19, score=274.8]; Cadherin-like [PF08266.14, score=39.0]; Cadherin-like [PF16184.7, score=26.4]} {Human: ENSG00000184226, PCDH9, protocadherin 9, [RH, Score=332, Expect=1e-95]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [RH, Score=321, Expect=2e-91]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [RH, Score=319, Expect=9e-91]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [RH, Score=332, Expect=1e-95]} {Dmel: FBgn0261574, kug, kugelei, [Score=216, Expect=1e-56]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=216, Expect=6e-57]} {Smed: dd_Smed_v6_17019_0_1, dd_Smed_v6_17019_0_1, [Score=285, Expect=2e-81]} {RNA1509_52268} {RNA1310_13234.1} {RNA815_20861}

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