Data search
Results for MligTC455_22422
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_22422 | 417 | 8.68 | Mlig455_017205 | Neo: - Age: - |
Mlig455_017205 {REF} {Length: 2822} {TRANSSPLICED} {Pfam: Orn/Lys/Arg decarboxylase, major domain [PF01276.22, score=337.0]; Orn/Lys/Arg decarboxylase, C-terminal domain [PF03711.17, score=33.5]; Aminotransferase class I and II [PF00155.23, score=29.3]; Beta-eliminating lyase [PF01212.23, score=22.1]; Cys/Met metabolism PLP-dependent enzyme [PF01053.22, score=20.3]} {RNA1509_2305, RNA1509_35781} {RNA1310_6434.1, RNA1509_35781} {RNA1509_35781, RNA815_6684} |
Cumulative graph for MligTC455_22422
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.103 | 3.588 | 0.47820 | 1.00000 | |
| RegionR2 | 0.44 | 3.588 | 0.50213 | 0.88143 | |
| RegionR3 | 0.303 | 3.588 | 0.53796 | 1.00000 | |
| RegionR4 | -0.123 | 3.588 | 0.84220 | 1.00000 | |
| RegionR5 | 0.404 | 3.588 | 0.36067 | 0.71276 | |
| RegionR6 | 0.132 | 3.588 | 0.79786 | 1.00000 | |
| RegionR7 | -0.205 | 3.588 | 0.75995 | 1.00000 | |
| RegionR8 | 0.152 | 3.588 | 0.84406 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.404 | 3.588 | 0.45676 | 1.00000 | |
| RegenerationR2 | 0.568 | 3.588 | 0.27793 | 0.72177 | |
| RegenerationR3 | 0.705 | 3.588 | 0.23412 | 0.66829 | |
| RegenerationR4 | 1.089 | 3.588 | 0.08106 | 0.45064 | |
| RegenerationR5 | 0.039 | 3.588 | 0.93733 | 1.00000 | |
| RegenerationR6 | 0.706 | 3.588 | 0.23167 | 0.57875 | |
| RegenerationBL | 0.858 | 3.588 | 0.21978 | 0.56689 | |
| RegenerationTP | 0.381 | 3.588 | 0.63345 | 0.97971 |
Genes with expression patterns similar to MligTC455_22422
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_22422 | 417 | 8.68 | Mlig455_017205 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_017205 {REF} {Length: 2822} {TRANSSPLICED} {Pfam: Orn/Lys/Arg decarboxylase, major domain [PF01276.22, score=337.0]; Orn/Lys/Arg decarboxylase, C-terminal domain [PF03711.17, score=33.5]; Aminotransferase class I and II [PF00155.23, score=29.3]; Beta-eliminating lyase [PF01212.23, score=22.1]; Cys/Met metabolism PLP-dependent enzyme [PF01053.22, score=20.3]} {RNA1509_2305, RNA1509_35781} {RNA1310_6434.1, RNA1509_35781} {RNA1509_35781, RNA815_6684} | |
| 2. | MligTC455_49223 | 194 | 4.04 | Mlig455_051164 | Neo: - Age: - |
0.962 | - | - | 0.962 | - | - | - | Mlig455_051164 {REF} {Length: 1528} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=98.2, Expect=3e-24]} {RNA1509_45032} {RNA1310_28402} {RNA815_16677} | |
| 3. | MligTC455_24598 | 15 | 0.31 | Mlig455_031589, Mlig455_061283, Mlig455_064050, Mlig455_064051, Mlig455_064305, Mlig455_065305 | Neo: - Age: - |
RTL1 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_031589 {REF} {Length: 543} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.0]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=93.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=32.7]; Aspartyl protease [PF09668.12, score=26.5]; Aspartyl protease [PF13650.8, score=26.3]; 'Cold-shock' DNA-binding domain [PF00313.24, score=22.7]; Zinc knuckle [PF00098.25, score=22.2]; Protein of unknown function (DUF1759) [PF03564.17, score=19.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=99.8, Expect=2e-20]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=84.0, Expect=1e-15]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=84.0, Expect=1e-15]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=296, Expect=8e-88]} {RNA1509_37808} {RNA1310_227.1} {RNA815_131.1} Mlig455_061283 {REF} {Length: 5420} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.0]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=93.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=32.7]; Aspartyl protease [PF09668.12, score=26.5]; Aspartyl protease [PF13650.8, score=26.3]; 'Cold-shock' DNA-binding domain [PF00313.24, score=22.7]; Zinc knuckle [PF00098.25, score=22.2]; Protein of unknown function (DUF1759) [PF03564.17, score=19.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=99.8, Expect=2e-20]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=84.0, Expect=1e-15]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=84.0, Expect=1e-15]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=296, Expect=8e-88]} {RNA1509_37808} {RNA1310_391} {RNA815_131.1} Mlig455_064050 {REF} {Length: 626} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=104.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=95.3]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=54.3, Expect=4e-08]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=53.9, Expect=3e-08]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=53.9, Expect=3e-08]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=126, Expect=4e-35]} {RNA1509_37808} {RNA1310_227.1} {RNA815_131.1} Mlig455_064051 {REF} {Length: 397} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.4]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=113, Expect=3e-30]} {RNA1509_30677} {RNA1310_391} {RNA815_131.1} Mlig455_064305 {REF} {Length: 507} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=94.3]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=144, Expect=3e-40]} {RNA1509_37808} {RNA1310_227.1} {RNA815_131.1} Mlig455_065305 {REF} {Length: 633} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.9]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=144, Expect=5e-41]} {RNA1509_37808} {RNA1310_391} {RNA815_131.1} |
| 4. | MligTC455_13857 | 12 | 0.24 | Mlig455_000132 | Neo: - Age: - |
0.951 | - | - | - | 0.951 | - | - | Mlig455_000132 {REF} {Length: 509} {NoTransDecoderORF} {RNA1509_30577} {RNA1310_36670.1} {RNA815_18763.1} | |
| 5. | MligTC455_38283 | 168 | 3.5 | Mlig455_005082, Mlig455_005086 | Neo: Germline Age: Up-Down-Down Region-specific R4: 5.871 Region-enriched R4: 3.800/0.00017 |
PRR9 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_005082 {REF} {Length: 2371} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=34.8]} {Smed: dd_Smed_v6_12466_0_1, dd_Smed_v6_12466_0_1, [Score=50.4, Expect=9e-07]} {RNA1509_39876} {RNA1310_46388} {RNA815_21909} Mlig455_005086 {REF} {Length: 2741} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=47.4, Expect=3e-07]} {RNA1509_39876} {RNA1310_46388, RNA1509_39876} {RNA1509_39876, RNA815_21909} |