Data search


search
Exact
Search

Results for MligTC455_22626

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_22626 575 11.98 Mlig455_001414

Neo: -

Age: -

PPFIA1 Mlig455_001414 {REF} {Length: 3765} {TRANSSPLICED} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=47.9]; SAM domain (Sterile alpha motif) [PF07647.19, score=34.1]} {Human: ENSG00000131626, PPFIA1, PTPRF interacting protein alpha 1, [Score=117, Expect=2e-26]} {Mouse: ENSMUSG00000037519, Ppfia1, protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1, [Score=103, Expect=3e-22]; ENSMUSG00000003863, Ppfia3, protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3, [Score=100, Expect=2e-21]} {Dmel: FBgn0046704, Liprin-alpha, [Score=112, Expect=2e-25]} {Celegans: WBGene00006364, syd-2, Liprin-alpha, [Score=100, Expect=1e-21]} {Smed: dd_Smed_v6_5468_0_2, dd_Smed_v6_5468_0_2, [Score=117, Expect=6e-27]} {RNA1509_14107} {RNA1310_6411} {RNA815_4969}

Cumulative graph for MligTC455_22626

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.409 3.861 0.72130 1.00000
RegionR2 -0.57 3.861 0.16766 0.51262
RegionR3 -0.507 3.861 0.14669 0.65134
RegionR4 0.769 3.861 0.07532 0.25422
RegionR5 0.001 3.861 0.99321 1.00000
RegionR6 -0.154 3.861 0.65845 1.00000
RegionR7 -0.683 3.861 0.17710 0.77174
RegionR8 0.735 3.861 0.13724 0.67714

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.11 3.861 0.94128 1.00000
RegenerationR2 -0.101 3.861 0.75849 0.97609
RegenerationR3 -0.48 3.861 0.22288 0.65833
RegenerationR4 -0.616 3.861 0.12338 0.53375
RegenerationR5 -0.188 3.861 0.58708 0.90399
RegenerationR6 -0.206 3.861 0.60149 0.86942
RegenerationBL -0.273 3.861 0.58299 0.93468
RegenerationTP -0.817 3.861 0.12447 0.53491


Genes with expression patterns similar to MligTC455_22626

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_22626 575 11.98 Mlig455_001414

Neo: -

Age: -

PPFIA1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_001414 {REF} {Length: 3765} {TRANSSPLICED} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=47.9]; SAM domain (Sterile alpha motif) [PF07647.19, score=34.1]} {Human: ENSG00000131626, PPFIA1, PTPRF interacting protein alpha 1, [Score=117, Expect=2e-26]} {Mouse: ENSMUSG00000037519, Ppfia1, protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1, [Score=103, Expect=3e-22]; ENSMUSG00000003863, Ppfia3, protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3, [Score=100, Expect=2e-21]} {Dmel: FBgn0046704, Liprin-alpha, [Score=112, Expect=2e-25]} {Celegans: WBGene00006364, syd-2, Liprin-alpha, [Score=100, Expect=1e-21]} {Smed: dd_Smed_v6_5468_0_2, dd_Smed_v6_5468_0_2, [Score=117, Expect=6e-27]} {RNA1509_14107} {RNA1310_6411} {RNA815_4969}
2. MligTC455_31013 2230 46.45 Mlig455_003089, Mlig455_062800

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.870

Region-enriched R8: 1.183/0.03771

TTN 0.971 - - - 0.971 - -

Mlig455_003089 {REF} {Length: 46506} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=1092.6]; Immunoglobulin domain [PF13927.8, score=683.7]; Immunoglobulin domain [PF13895.8, score=412.6]; Immunoglobulin domain [PF00047.27, score=405.5]; Immunoglobulin V-set domain [PF07686.19, score=208.4]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=86.1]; Immunoglobulin domain [PF18452.3, score=82.1]; Natural killer cell receptor 2B4 [PF11465.10, score=67.8]; Immunoglobulin C1-set domain [PF07654.17, score=57.5]; Penicillin-Binding Protein C-terminus Family [PF06832.14, score=43.9]; C17orf99 Ig domain [PF17736.3, score=31.5]; T-cell surface glycoprotein CD3 delta chain [PF16680.7, score=27.4]; Izumo-like Immunoglobulin domain [PF16706.7, score=25.2]} {Human: ENSG00000155657, TTN, titin, [Score=358, Expect=9e-98]} {Mouse: ENSMUSG00000051747, Ttn, titin, [Score=348, Expect=7e-95]} {Dmel: FBgn0086906, sls, sallimus, [RH, Score=469, Expect=1e-131]} {Celegans: WBGene00006820, unc-89, Muscle M-line assembly protein unc-89, [Score=357, Expect=6e-98]} {Smed: dd_Smed_v6_13910_0_1, dd_Smed_v6_13910_0_1, [Score=377, Expect=2e-104]} {RNA1509_774} {RNA1310_1.1, RNA1509_774} {RNA1509_774, RNA815_0}

Mlig455_062800 {REF} {Length: 378} {RNA1509_876} {RNA1310_105} {RNA815_74}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA