TomoSeq data search

Data search

Results for MligTC455_22637

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_22637	28648	596.84	Mlig455_067025	Neo: Int S/G2/M Age: Down-Down-Up, logFC(26M/2M)=-0.335	RPS18	Mlig455_067025 {REF} {Length: 668} {TRANSSPLICED} {Pfam: Ribosomal protein S13/S18 [PF00416.24, score=157.0]} {Human: ENSG00000096150, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000231500, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000226225, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000223367, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000235650, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]} {Mouse: ENSMUSG00000008668, Rps18, ribosomal protein S18, [RH, Score=215, Expect=1e-72]; ENSMUSG00000113061, Gm11361, predicted pseudogene 11361, [RH, Score=213, Expect=9e-72]; ENSMUSG00000069117, Gm10260, predicted gene 10260, [RH, Score=211, Expect=5e-71]} {Dmel: FBgn0010411, RpS18, Ribosomal protein S18, [RH, Score=211, Expect=6e-71]} {Celegans: WBGene00004487, rps-18, Ribosomal Protein, Small subunit, [RH, Score=202, Expect=1e-67]} {Smed: dd_Smed_v6_99_0_1, dd_Smed_v6_99_0_1, [RH, Score=204, Expect=1e-68]} {RNA1509_1122, RNA1509_12646, RNA1509_1902, RNA1509_3740, RNA1509_4379, RNA1509_48043, RNA1509_59746} {RNA1310_47837, RNA1509_1122, RNA1509_12646, RNA1509_1902, RNA1509_3740, RNA1509_4379, RNA1509_48043, RNA1509_59746} {RNA1509_1122, RNA1509_12646, RNA1509_1902, RNA1509_3740, RNA1509_4379, RNA1509_48043, RNA1509_59746, RNA815_26783}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_22637

28648

596.84

Mlig455_067025

Neo: Int S/G2/M

Age: Down-Down-Up, logFC(26M/2M)=-0.335

RPS18

Mlig455_067025 {REF} {Length: 668} {TRANSSPLICED} {Pfam: Ribosomal protein S13/S18 [PF00416.24, score=157.0]} {Human: ENSG00000096150, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000231500, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000226225, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000223367, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000235650, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]} {Mouse: ENSMUSG00000008668, Rps18, ribosomal protein S18, [RH, Score=215, Expect=1e-72]; ENSMUSG00000113061, Gm11361, predicted pseudogene 11361, [RH, Score=213, Expect=9e-72]; ENSMUSG00000069117, Gm10260, predicted gene 10260, [RH, Score=211, Expect=5e-71]} {Dmel: FBgn0010411, RpS18, Ribosomal protein S18, [RH, Score=211, Expect=6e-71]} {Celegans: WBGene00004487, rps-18, Ribosomal Protein, Small subunit, [RH, Score=202, Expect=1e-67]} {Smed: dd_Smed_v6_99_0_1, dd_Smed_v6_99_0_1, [RH, Score=204, Expect=1e-68]} {RNA1509_1122, RNA1509_12646, RNA1509_1902, RNA1509_3740, RNA1509_4379, RNA1509_48043, RNA1509_59746} {RNA1310_47837, RNA1509_1122, RNA1509_12646, RNA1509_1902, RNA1509_3740, RNA1509_4379, RNA1509_48043, RNA1509_59746} {RNA1509_1122, RNA1509_12646, RNA1509_1902, RNA1509_3740, RNA1509_4379, RNA1509_48043, RNA1509_59746, RNA815_26783}

Cumulative graph for MligTC455_22637

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.91	9.315	0.01920	0.38590
RegionR2	-0.725	9.315	0.03304	0.20734
RegionR3	0.214	9.315	0.45765	0.96759
RegionR4	0.373	9.315	0.23434	0.52853
RegionR5	0.545	9.315	0.04644	0.17782
RegionR6	0.287	9.315	0.31174	0.90125
RegionR7	0.467	9.315	0.08875	0.57107
RegionR8	-0.251	9.315	0.41447	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.481	9.315	0.30486	0.99878
RegenerationR2	-0.235	9.315	0.52916	0.88375
RegenerationR3	-0.475	9.315	0.20887	0.64436
RegenerationR4	-0.377	9.315	0.32628	0.76250
RegenerationR5	-0.542	9.315	0.14766	0.56438
RegenerationR6	-0.647	9.315	0.08639	0.36781
RegenerationBL	-0.26	9.315	0.41783	0.78657
RegenerationTP	-0.532	9.315	0.12777	0.54006

Genes with expression patterns similar to MligTC455_22637

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_22637	28648	596.84	Mlig455_067025	Neo: Int S/G2/M Age: Down-Down-Up, logFC(26M/2M)=-0.335	RPS18	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_067025 {REF} {Length: 668} {TRANSSPLICED} {Pfam: Ribosomal protein S13/S18 [PF00416.24, score=157.0]} {Human: ENSG00000096150, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000231500, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000226225, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000223367, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000235650, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]} {Mouse: ENSMUSG00000008668, Rps18, ribosomal protein S18, [RH, Score=215, Expect=1e-72]; ENSMUSG00000113061, Gm11361, predicted pseudogene 11361, [RH, Score=213, Expect=9e-72]; ENSMUSG00000069117, Gm10260, predicted gene 10260, [RH, Score=211, Expect=5e-71]} {Dmel: FBgn0010411, RpS18, Ribosomal protein S18, [RH, Score=211, Expect=6e-71]} {Celegans: WBGene00004487, rps-18, Ribosomal Protein, Small subunit, [RH, Score=202, Expect=1e-67]} {Smed: dd_Smed_v6_99_0_1, dd_Smed_v6_99_0_1, [RH, Score=204, Expect=1e-68]} {RNA1509_1122, RNA1509_12646, RNA1509_1902, RNA1509_3740, RNA1509_4379, RNA1509_48043, RNA1509_59746} {RNA1310_47837, RNA1509_1122, RNA1509_12646, RNA1509_1902, RNA1509_3740, RNA1509_4379, RNA1509_48043, RNA1509_59746} {RNA1509_1122, RNA1509_12646, RNA1509_1902, RNA1509_3740, RNA1509_4379, RNA1509_48043, RNA1509_59746, RNA815_26783}
2.	MligTC455_22636	16678	347.45	Mlig455_033578	Neo: Int S/G2/M Age: Down-Down-Up	RPS18	4.315	0.993	0.997	-	0.770	0.738	0.817	Mlig455_033578 {REF} {Length: 670} {TRANSSPLICED} {Pfam: Ribosomal protein S13/S18 [PF00416.24, score=157.0]} {Human: ENSG00000096150, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000231500, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000226225, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000223367, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000235650, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]} {Mouse: ENSMUSG00000008668, Rps18, ribosomal protein S18, [RH, Score=215, Expect=1e-72]; ENSMUSG00000113061, Gm11361, predicted pseudogene 11361, [RH, Score=213, Expect=9e-72]; ENSMUSG00000069117, Gm10260, predicted gene 10260, [RH, Score=211, Expect=5e-71]} {Dmel: FBgn0010411, RpS18, Ribosomal protein S18, [RH, Score=211, Expect=6e-71]} {Celegans: WBGene00004487, rps-18, Ribosomal Protein, Small subunit, [RH, Score=202, Expect=1e-67]} {Smed: dd_Smed_v6_99_0_1, dd_Smed_v6_99_0_1, [RH, Score=204, Expect=1e-68]} {RNA1509_11146, RNA1509_26734, RNA1509_610} {RNA1310_52729, RNA1509_11146, RNA1509_26734, RNA1509_610} {RNA1509_11146, RNA1509_26734, RNA1509_610, RNA815_26783}
3.	MligTC455_51429	110	2.29	Mlig455_024820, Mlig455_024899	Neo: - Age: Up-Down-Down	KCNK18	0.957	-	-	-	-	-	0.957	Mlig455_024820 {REF} {Length: 2654} {Pfam: Ion channel [PF07885.18, score=117.7]; Ion transport protein [PF00520.33, score=25.7]} {Human: ENSG00000186795, KCNK18, potassium two pore domain channel subfamily K member 18, [RH, Score=102, Expect=6e-23]} {Mouse: ENSMUSG00000040901, Kcnk18, potassium channel, subfamily K, member 18, [Score=101, Expect=7e-23]; ENSMUSG00000033854, Kcnk10, potassium channel, subfamily K, member 10, [Score=97.8, Expect=3e-21]} {Dmel: FBgn0033257, sand, sandman, [RH, Score=159, Expect=1e-43]} {Celegans: WBGene00010784, twk-48, TWiK family of potassium channels, [Score=171, Expect=4e-48]} {Smed: dd_Smed_v6_19825_0_1, dd_Smed_v6_19825_0_1, [RH, Score=333, Expect=5e-110]} {RNA1509_56216} {RNA1310_14699.1, RNA1509_56216} {RNA1509_56216, RNA815_23055} Mlig455_024899 {REF} {Length: 3465} {Pfam: Ion channel [PF07885.18, score=115.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=113.8]; Ion transport protein [PF00520.33, score=23.7]} {Human: ENSG00000186795, KCNK18, potassium two pore domain channel subfamily K member 18, [RH, Score=101, Expect=2e-22]} {Mouse: ENSMUSG00000040901, Kcnk18, potassium channel, subfamily K, member 18, [Score=101, Expect=2e-22]; ENSMUSG00000033854, Kcnk10, potassium channel, subfamily K, member 10, [Score=97.4, Expect=1e-20]} {Dmel: FBgn0033257, sand, sandman, [RH, Score=159, Expect=3e-42]} {Celegans: WBGene00010784, twk-48, TWiK family of potassium channels, [Score=170, Expect=2e-46]} {Smed: dd_Smed_v6_19825_0_1, dd_Smed_v6_19825_0_1, [RH, Score=333, Expect=3e-106]} {RNA1509_56216} {RNA1310_14699.1} {RNA815_252.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_22637

28648

596.84

Mlig455_067025

Neo: Int S/G2/M

Age: Down-Down-Up, logFC(26M/2M)=-0.335

RPS18

1.000

MligTC455_22636

16678

347.45

Mlig455_033578

Neo: Int S/G2/M

Age: Down-Down-Up

RPS18

4.315

0.993

0.997

0.770

0.738

0.817

Mlig455_033578 {REF} {Length: 670} {TRANSSPLICED} {Pfam: Ribosomal protein S13/S18 [PF00416.24, score=157.0]} {Human: ENSG00000096150, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000231500, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000226225, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000223367, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000235650, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]} {Mouse: ENSMUSG00000008668, Rps18, ribosomal protein S18, [RH, Score=215, Expect=1e-72]; ENSMUSG00000113061, Gm11361, predicted pseudogene 11361, [RH, Score=213, Expect=9e-72]; ENSMUSG00000069117, Gm10260, predicted gene 10260, [RH, Score=211, Expect=5e-71]} {Dmel: FBgn0010411, RpS18, Ribosomal protein S18, [RH, Score=211, Expect=6e-71]} {Celegans: WBGene00004487, rps-18, Ribosomal Protein, Small subunit, [RH, Score=202, Expect=1e-67]} {Smed: dd_Smed_v6_99_0_1, dd_Smed_v6_99_0_1, [RH, Score=204, Expect=1e-68]} {RNA1509_11146, RNA1509_26734, RNA1509_610} {RNA1310_52729, RNA1509_11146, RNA1509_26734, RNA1509_610} {RNA1509_11146, RNA1509_26734, RNA1509_610, RNA815_26783}

MligTC455_51429

110

2.29

Mlig455_024820, Mlig455_024899

Neo: -

Age: Up-Down-Down

KCNK18

0.957

Mlig455_024820 {REF} {Length: 2654} {Pfam: Ion channel [PF07885.18, score=117.7]; Ion transport protein [PF00520.33, score=25.7]} {Human: ENSG00000186795, KCNK18, potassium two pore domain channel subfamily K member 18, [RH, Score=102, Expect=6e-23]} {Mouse: ENSMUSG00000040901, Kcnk18, potassium channel, subfamily K, member 18, [Score=101, Expect=7e-23]; ENSMUSG00000033854, Kcnk10, potassium channel, subfamily K, member 10, [Score=97.8, Expect=3e-21]} {Dmel: FBgn0033257, sand, sandman, [RH, Score=159, Expect=1e-43]} {Celegans: WBGene00010784, twk-48, TWiK family of potassium channels, [Score=171, Expect=4e-48]} {Smed: dd_Smed_v6_19825_0_1, dd_Smed_v6_19825_0_1, [RH, Score=333, Expect=5e-110]} {RNA1509_56216} {RNA1310_14699.1, RNA1509_56216} {RNA1509_56216, RNA815_23055}

Mlig455_024899 {REF} {Length: 3465} {Pfam: Ion channel [PF07885.18, score=115.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=113.8]; Ion transport protein [PF00520.33, score=23.7]} {Human: ENSG00000186795, KCNK18, potassium two pore domain channel subfamily K member 18, [RH, Score=101, Expect=2e-22]} {Mouse: ENSMUSG00000040901, Kcnk18, potassium channel, subfamily K, member 18, [Score=101, Expect=2e-22]; ENSMUSG00000033854, Kcnk10, potassium channel, subfamily K, member 10, [Score=97.4, Expect=1e-20]} {Dmel: FBgn0033257, sand, sandman, [RH, Score=159, Expect=3e-42]} {Celegans: WBGene00010784, twk-48, TWiK family of potassium channels, [Score=170, Expect=2e-46]} {Smed: dd_Smed_v6_19825_0_1, dd_Smed_v6_19825_0_1, [RH, Score=333, Expect=3e-106]} {RNA1509_56216} {RNA1310_14699.1} {RNA815_252.1}