TomoSeq data search

Data search

Results for MligTC455_22650

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_22650

6

0.12

Mlig455_023896

Neo: -

Age: -

Mlig455_023896 {REF} {Length: 990} {NoTransDecoderORF} {RNA1310_119224.2}

Cumulative graph for MligTC455_22650

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_22650

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_22650	6	0.12	Mlig455_023896	Neo: - Age: -		1	-	-	-	1.000	-	-	Mlig455_023896 {REF} {Length: 990} {NoTransDecoderORF} {RNA1310_119224.2}
2.	MligTC455_07839	349	7.28	Mlig455_009026	Neo: - Age: logFC(26M/2M)=-0.714 Region-enriched R6: 7.596/0.00000		0.996	-	-	-	0.996	-	-	Mlig455_009026 {REF} {Length: 1373} {RNA1509_32711} {RNA1310_36790} {RNA815_27832}
3.	MligTC455_07945	60	1.25	Mlig455_020568, Mlig455_044520	Neo: - Age: -	HES1	0.982	-	-	-	0.982	-	-	Mlig455_020568 {REF} {Length: 914} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=50.2]} {Human: ENSG00000114315, HES1, hes family bHLH transcription factor 1, [Score=65.9, Expect=8e-13]} {Mouse: ENSMUSG00000022528, Hes1, hes family bHLH transcription factor 1, [Score=65.5, Expect=7e-13]} {Dmel: FBgn0002735, E(spl)mgamma-HLH, Enhancer of split mgamma, helix-loop-helix, [RH, Score=70.9, Expect=2e-15]} {Celegans: WBGene00003008, lin-22, Lin-22, [RH, Score=55.8, Expect=3e-10]} {Smed: dd_Smed_v6_17332_0_1, dd_Smed_v6_17332_0_1, [RH, Score=52.8, Expect=6e-09]} {RNA1310_141742} Mlig455_044520 {REF} {Length: 913} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=50.2]} {Human: ENSG00000114315, HES1, hes family bHLH transcription factor 1, [Score=64.3, Expect=4e-12]} {Mouse: ENSMUSG00000022528, Hes1, hes family bHLH transcription factor 1, [Score=63.9, Expect=3e-12]} {Dmel: FBgn0002735, E(spl)mgamma-HLH, Enhancer of split mgamma, helix-loop-helix, [RH, Score=68.6, Expect=2e-14]} {Celegans: WBGene00003008, lin-22, Lin-22, [RH, Score=56.2, Expect=3e-10]} {Smed: dd_Smed_v6_17332_0_1, dd_Smed_v6_17332_0_1, [Score=48.1, Expect=3e-07]} {RNA1310_141742}
4.	MligTC455_21658	97	2.02	Mlig455_048689, Mlig455_048720	Neo: - Age: -	LMO1	0.976	-	-	-	0.976	-	-	Mlig455_048689 {REF} {Length: 2106} {Pfam: LIM domain [PF00412.24, score=88.3]} {Human: ENSG00000166407, LMO1, LIM domain only 1, [RH, Score=184, Expect=1e-59]; ENSG00000048540, LMO3, LIM domain only 3, [RH, Score=181, Expect=2e-58]} {Mouse: ENSMUSG00000036111, Lmo1, LIM domain only 1, [RH, Score=181, Expect=1e-58]; ENSMUSG00000030226, Lmo3, LIM domain only 3, [RH, Score=180, Expect=2e-58]} {Dmel: FBgn0265598, Bx, Beadex, [RH, Score=196, Expect=4e-62]} {Celegans: WBGene00002987, lim-4, LIM domain family; Putative transcription factor LIM-4, [Score=79.3, Expect=8e-18]} {Smed: dd_Smed_v6_6263_0_1, dd_Smed_v6_6263_0_1, [RH, Score=139, Expect=3e-42]} {RNA1509_12583} {RNA1310_56294} {RNA815_40845} Mlig455_048720 {REF} {Length: 2081} {Pfam: LIM domain [PF00412.24, score=90.0]} {Human: ENSG00000166407, LMO1, LIM domain only 1, [RH, Score=186, Expect=1e-60]; ENSG00000048540, LMO3, LIM domain only 3, [RH, Score=183, Expect=2e-59]} {Mouse: ENSMUSG00000036111, Lmo1, LIM domain only 1, [RH, Score=183, Expect=1e-59]; ENSMUSG00000030226, Lmo3, LIM domain only 3, [RH, Score=183, Expect=1e-59]} {Dmel: FBgn0265598, Bx, Beadex, [RH, Score=198, Expect=1e-62]} {Celegans: WBGene00002987, lim-4, LIM domain family; Putative transcription factor LIM-4, [Score=79.3, Expect=7e-18]} {Smed: dd_Smed_v6_17422_0_1, dd_Smed_v6_17422_0_1, [RH, Score=140, Expect=6e-42]} {RNA1310_56294} {RNA815_40845}
5.	MligTC455_11897	20	0.42	Mlig455_016046	Neo: - Age: -	ZNF502	0.974	-	-	-	0.974	-	-	Mlig455_016046 {REF} {Length: 2394} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=53.8]; Zinc-finger double domain [PF13465.8, score=46.1]; C2H2-type zinc finger [PF13894.8, score=40.7]; C2H2-type zinc finger [PF13912.8, score=18.7]} {Human: ENSG00000196653, ZNF502, zinc finger protein 502, [Score=91.7, Expect=2e-20]; ENSG00000281448, ZNF502, zinc finger protein 502, [Score=91.7, Expect=2e-20]; ENSG00000272602, ZNF595, zinc finger protein 595, [Score=90.9, Expect=3e-20]; ENSG00000131845, ZNF304, zinc finger protein 304, [Score=90.5, Expect=5e-20]; ENSG00000124613, ZNF391, zinc finger protein 391, [Score=90.1, Expect=2e-20]; ENSG00000235109, ZSCAN31, zinc finger and SCAN domain containing 31, [Score=89.0, Expect=7e-20]; ENSG00000196967, ZNF585A, zinc finger protein 585A, [Score=88.6, Expect=2e-19]; ENSG00000237440, ZNF737, zinc finger protein 737, [Score=88.6, Expect=2e-19]; ENSG00000188283, ZNF383, zinc finger protein 383, [Score=88.6, Expect=1e-19]; ENSG00000120738, EGR1, early growth response 1, [Score=88.2, Expect=2e-19]; ENSG00000196172, ZNF681, zinc finger protein 681, [Score=87.8, Expect=3e-19]; ENSG00000197360, ZNF98, zinc finger protein 98, [Score=87.4, Expect=5e-19]; ENSG00000170631, ZNF16, zinc finger protein 16, [Score=87.4, Expect=5e-19]; ENSG00000197050, ZNF420, zinc finger protein 420, [Score=87.4, Expect=5e-19]} {Mouse: ENSMUSG00000095648, Gm2004, predicted gene 2004, [Score=93.6, Expect=2e-21]; ENSMUSG00000078875, Gm14419, predicted gene 14419, [Score=93.6, Expect=2e-21]; ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=93.6, Expect=3e-21]; ENSMUSG00000078861, Zfp931, zinc finger protein 931, [Score=93.2, Expect=5e-22]; ENSMUSG00000078868, Gm14412, predicted gene 14412, [Score=91.3, Expect=1e-20]; ENSMUSG00000078869, Gm14409, predicted gene 14409, [Score=89.7, Expect=2e-20]; ENSMUSG00000078872, Gm14401, predicted gene 14401, [Score=89.7, Expect=1e-20]} {Dmel: FBgn0013469, klu, klumpfuss, [Score=114, Expect=2e-28]} {Celegans: WBGene00013970, klu-1, KLUmpfuss related, [Score=110, Expect=2e-27]} {Smed: dd_Smed_v6_16277_0_1, dd_Smed_v6_16277_0_1, [Score=113, Expect=2e-29]} {RNA1310_62665} {RNA815_27227}
6.	MligTC455_36191	673	14.03	Mlig455_061150, Mlig455_061162	Neo: - Age: Down-Down-Up Region-enriched R6: 8.740/0.00000	R3HDML	0.971	-	-	-	0.971	-	-	Mlig455_061150 {REF} {Length: 1595} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=57.2]} {Human: ENSG00000101074, R3HDML, R3H domain containing like, [Score=72.4, Expect=7e-14]} {Mouse: ENSMUSG00000078949, R3hdml, R3H domain containing-like, [Score=71.6, Expect=8e-14]} {Dmel: FBgn0038126, CG8483, [Score=68.6, Expect=2e-12]} {Celegans: WBGene00013972, scl-20, SCP-Like extracellular protein, [Score=49.3, Expect=1e-06]} {Smed: dd_Smed_v6_6756_0_1, dd_Smed_v6_6756_0_1, [Score=94.4, Expect=2e-22]} {RNA1509_16373} {RNA1310_19845.1} {RNA815_8030} Mlig455_061162 {REF} {Length: 1534} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=57.2]} {Human: ENSG00000101074, R3HDML, R3H domain containing like, [Score=72.4, Expect=7e-14]} {Mouse: ENSMUSG00000078949, R3hdml, R3H domain containing-like, [Score=71.6, Expect=8e-14]} {Dmel: FBgn0038126, CG8483, [Score=68.6, Expect=2e-12]} {Celegans: WBGene00013972, scl-20, SCP-Like extracellular protein, [Score=49.3, Expect=1e-06]} {Smed: dd_Smed_v6_6756_0_1, dd_Smed_v6_6756_0_1, [Score=94.4, Expect=2e-22]} {RNA1509_16373} {RNA1310_19845.1, RNA1509_16373} {RNA1509_16373, RNA815_8030}
7.	MligTC455_32365	1818	37.88	Mlig455_034874	Neo: Germline Age: - Region-enriched R6: 7.473/0.00000 Region-enriched R8: 4.319/0.02477	SSPO	0.97	-	-	-	0.970	-	-	Mlig455_034874 {REF} {Length: 16157} {Pfam: ShK domain-like [PF01549.26, score=23.6]} {Human: ENSG00000197558, SSPO, SCO-spondin, [Score=93.6, Expect=1e-17]} {Mouse: ENSMUSG00000047730, Fcgbp, Fc fragment of IgG binding protein, [Score=90.5, Expect=8e-17]; ENSMUSG00000079173, Zan, zonadhesin, [Score=89.0, Expect=2e-16]} {Smed: dd_Smed_v6_91_0_2, dd_Smed_v6_91_0_2, [Score=290, Expect=4e-78]} {RNA1509_38} {RNA1310_23} {RNA815_13}
8.	MligTC455_00511	23	0.49	Mlig455_069083	Neo: - Age: - Region-enriched R4: 3.129/0.04321		0.967	-	-	-	0.967	-	-	Mlig455_069083 {REF} {Length: 239} {NoTransDecoderORF} {RNA1310_140483}
9.	MligTC455_07265	9	0.2	Mlig455_068320	Neo: - Age: -		0.966	-	-	-	0.966	-	-	Mlig455_068320 {REF} {Length: 296} {NoTransDecoderORF} {RNA1509_59804} {RNA1310_35910.2} {RNA815_21530}
10.	MligTC455_06089	26	0.54	Mlig455_037648	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.770		0.965	-	-	-	0.965	-	-	Mlig455_037648 {REF} {Length: 2465} {Pfam: Otopetrin [PF03189.15, score=27.4]} {RNA1509_10108} {RNA1310_12138.2} {RNA815_2847.1}
11.	MligTC455_00472	20	0.43	Mlig455_052544	Neo: - Age: -		0.964	-	-	-	0.964	-	-	Mlig455_052544 {REF} {Length: 285} {NoTransDecoderORF} {RNA1310_140483}
12.	MligTC455_36758	1551	32.3	Mlig455_034048	Neo: - Age: Up-Down-Down Region-enriched R6: 7.207/0.00000		0.952	-	-	-	0.952	-	-	Mlig455_034048 {REF} {Length: 7277} {Smed: dd_Smed_v6_52973_0_1, dd_Smed_v6_52973_0_1, [Score=106, Expect=4e-23]} {RNA1509_301} {RNA1310_15} {RNA815_1011.1}
13.	MligTC455_33688	1392	29	Mlig455_049554	Neo: - Age: - Region-enriched R6: 7.279/0.00000	ALPL	0.95	-	-	-	0.950	-	-	Mlig455_049554 {REF} {Length: 2146} {Pfam: Alkaline phosphatase [PF00245.22, score=389.9]; Type I phosphodiesterase / nucleotide pyrophosphatase [PF01663.24, score=21.1]} {Human: ENSG00000162551, ALPL, alkaline phosphatase, liver/bone/kidney, [Score=352, Expect=4e-115]} {Mouse: ENSMUSG00000028766, Alpl, alkaline phosphatase, liver/bone/kidney, [Score=357, Expect=3e-117]} {Dmel: FBgn0016123, Alp4, Alkaline phosphatase 4, [RH, Score=302, Expect=2e-95]} {Smed: dd_Smed_v6_8942_0_1, dd_Smed_v6_8942_0_1, [Score=289, Expect=3e-91]} {RNA1509_26719, RNA1509_38712, RNA1509_5173} {RNA1310_14406, RNA1509_26719, RNA1509_38712, RNA1509_5173} {RNA1509_26719, RNA1509_38712, RNA1509_5173, RNA815_5415}

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