TomoSeq data search

Data search

Results for MligTC455_22706

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_22706	204	4.24	Mlig455_009698	Neo: Irradiation Age: -	TUBA1C	Mlig455_009698 {REF} {Length: 1608} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=220.1]; Tubulin C-terminal domain [PF03953.19, score=166.8]} {Human: ENSG00000167553, TUBA1C, tubulin alpha 1c, [Score=728, Expect=0.0]; ENSG00000123416, TUBA1B, tubulin alpha 1b, [Score=725, Expect=0.0]; ENSG00000167552, TUBA1A, tubulin alpha 1a, [Score=723, Expect=0.0]; ENSG00000075886, TUBA3D, tubulin alpha 3d, [Score=722, Expect=0.0]; ENSG00000198033, TUBA3C, tubulin alpha 3c, [Score=722, Expect=0.0]; ENSG00000127824, TUBA4A, tubulin alpha 4a, [Score=717, Expect=0.0]; ENSG00000152086, TUBA3E, tubulin alpha 3e, [Score=712, Expect=0.0]; ENSG00000183785, TUBA8, tubulin alpha 8, [Score=703, Expect=0.0]} {Mouse: ENSMUSG00000043091, Tuba1c, tubulin, alpha 1C, [Score=729, Expect=0.0]; ENSMUSG00000023004, Tuba1b, tubulin, alpha 1B, [Score=725, Expect=0.0]; ENSMUSG00000072235, Tuba1a, tubulin, alpha 1A, [Score=723, Expect=0.0]; ENSMUSG00000067338, Tuba3b, tubulin, alpha 3B, [Score=722, Expect=0.0]; ENSMUSG00000067702, Tuba3a, tubulin, alpha 3A, [Score=722, Expect=0.0]; ENSMUSG00000026202, Tuba4a, tubulin, alpha 4A, [Score=717, Expect=0.0]; ENSMUSG00000030137, Tuba8, tubulin, alpha 8, [Score=701, Expect=0.0]} {Dmel: FBgn0003885, alphaTub84D, alpha-Tubulin at 84D, [Score=713, Expect=0.0]} {Celegans: WBGene00006529, tba-2, Tubulin alpha-2 chain, [Score=713, Expect=0.0]} {Smed: dd_Smed_v6_648_0_1, dd_Smed_v6_648_0_1, [Score=697, Expect=0.0]} {RNA1509_12425, RNA1509_21497} {RNA1310_29853.1, RNA1509_12425} {RNA1509_12425, RNA815_5848.2}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_22706

204

4.24

Mlig455_009698

Neo: Irradiation

Age: -

TUBA1C

Mlig455_009698 {REF} {Length: 1608} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=220.1]; Tubulin C-terminal domain [PF03953.19, score=166.8]} {Human: ENSG00000167553, TUBA1C, tubulin alpha 1c, [Score=728, Expect=0.0]; ENSG00000123416, TUBA1B, tubulin alpha 1b, [Score=725, Expect=0.0]; ENSG00000167552, TUBA1A, tubulin alpha 1a, [Score=723, Expect=0.0]; ENSG00000075886, TUBA3D, tubulin alpha 3d, [Score=722, Expect=0.0]; ENSG00000198033, TUBA3C, tubulin alpha 3c, [Score=722, Expect=0.0]; ENSG00000127824, TUBA4A, tubulin alpha 4a, [Score=717, Expect=0.0]; ENSG00000152086, TUBA3E, tubulin alpha 3e, [Score=712, Expect=0.0]; ENSG00000183785, TUBA8, tubulin alpha 8, [Score=703, Expect=0.0]} {Mouse: ENSMUSG00000043091, Tuba1c, tubulin, alpha 1C, [Score=729, Expect=0.0]; ENSMUSG00000023004, Tuba1b, tubulin, alpha 1B, [Score=725, Expect=0.0]; ENSMUSG00000072235, Tuba1a, tubulin, alpha 1A, [Score=723, Expect=0.0]; ENSMUSG00000067338, Tuba3b, tubulin, alpha 3B, [Score=722, Expect=0.0]; ENSMUSG00000067702, Tuba3a, tubulin, alpha 3A, [Score=722, Expect=0.0]; ENSMUSG00000026202, Tuba4a, tubulin, alpha 4A, [Score=717, Expect=0.0]; ENSMUSG00000030137, Tuba8, tubulin, alpha 8, [Score=701, Expect=0.0]} {Dmel: FBgn0003885, alphaTub84D, alpha-Tubulin at 84D, [Score=713, Expect=0.0]} {Celegans: WBGene00006529, tba-2, Tubulin alpha-2 chain, [Score=713, Expect=0.0]} {Smed: dd_Smed_v6_648_0_1, dd_Smed_v6_648_0_1, [Score=697, Expect=0.0]} {RNA1509_12425, RNA1509_21497} {RNA1310_29853.1, RNA1509_12425} {RNA1509_12425, RNA815_5848.2}

Cumulative graph for MligTC455_22706

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.283	2.432	0.86482	1.00000
RegionR2	-1.092	2.432	0.23965	0.61428
RegionR3	-0.701	2.432	0.35355	0.88918
RegionR4	0.584	2.432	0.45670	0.78480
RegionR5	0.106	2.432	0.87551	1.00000
RegionR6	-0.007	2.432	0.99485	1.00000
RegionR7	1.333	2.432	0.05569	0.45385
RegionR8	0.059	2.432	0.95260	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.039	2.432	0.23322	0.96305
RegenerationR2	-0.595	2.432	0.50869	0.87492
RegenerationR3	-0.128	2.432	0.88858	1.00000
RegenerationR4	-1.58	2.432	0.05909	0.39026
RegenerationR5	-1.662	2.432	0.04767	0.35382
RegenerationR6	-2.04	2.432	0.03571	0.23662
RegenerationBL	-2.118	2.432	0.05651	0.27579
RegenerationTP	-4.48	2.432	0.00285	0.08753

Genes with expression patterns similar to MligTC455_22706

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_22706	204	4.24	Mlig455_009698	Neo: Irradiation Age: -	TUBA1C	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_009698 {REF} {Length: 1608} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=220.1]; Tubulin C-terminal domain [PF03953.19, score=166.8]} {Human: ENSG00000167553, TUBA1C, tubulin alpha 1c, [Score=728, Expect=0.0]; ENSG00000123416, TUBA1B, tubulin alpha 1b, [Score=725, Expect=0.0]; ENSG00000167552, TUBA1A, tubulin alpha 1a, [Score=723, Expect=0.0]; ENSG00000075886, TUBA3D, tubulin alpha 3d, [Score=722, Expect=0.0]; ENSG00000198033, TUBA3C, tubulin alpha 3c, [Score=722, Expect=0.0]; ENSG00000127824, TUBA4A, tubulin alpha 4a, [Score=717, Expect=0.0]; ENSG00000152086, TUBA3E, tubulin alpha 3e, [Score=712, Expect=0.0]; ENSG00000183785, TUBA8, tubulin alpha 8, [Score=703, Expect=0.0]} {Mouse: ENSMUSG00000043091, Tuba1c, tubulin, alpha 1C, [Score=729, Expect=0.0]; ENSMUSG00000023004, Tuba1b, tubulin, alpha 1B, [Score=725, Expect=0.0]; ENSMUSG00000072235, Tuba1a, tubulin, alpha 1A, [Score=723, Expect=0.0]; ENSMUSG00000067338, Tuba3b, tubulin, alpha 3B, [Score=722, Expect=0.0]; ENSMUSG00000067702, Tuba3a, tubulin, alpha 3A, [Score=722, Expect=0.0]; ENSMUSG00000026202, Tuba4a, tubulin, alpha 4A, [Score=717, Expect=0.0]; ENSMUSG00000030137, Tuba8, tubulin, alpha 8, [Score=701, Expect=0.0]} {Dmel: FBgn0003885, alphaTub84D, alpha-Tubulin at 84D, [Score=713, Expect=0.0]} {Celegans: WBGene00006529, tba-2, Tubulin alpha-2 chain, [Score=713, Expect=0.0]} {Smed: dd_Smed_v6_648_0_1, dd_Smed_v6_648_0_1, [Score=697, Expect=0.0]} {RNA1509_12425, RNA1509_21497} {RNA1310_29853.1, RNA1509_12425} {RNA1509_12425, RNA815_5848.2}
2.	MligTC455_07394	59	1.22	Mlig455_057223	Neo: Int S/G2/M Age: -		0.973	-	-	-	0.973	-	-	Mlig455_057223 {REF} {Length: 738} {NoTransDecoderORF} {RNA1310_52033}
3.	MligTC455_51282	468	9.76	Mlig455_056981	Neo: Germline Age: Up-Down-Down Region-specific R4: 4.176 Region-enriched R4: 2.632/0.00000	RCBTB1	0.966	-	-	-	-	0.966	-	Mlig455_056981 {REF} {Length: 2202} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=143.1]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=108.1]; BTB/POZ domain [PF00651.33, score=76.5]; BTB And C-terminal Kelch [PF07707.17, score=20.9]; TUP1-like enhancer of split [PF07569.13, score=20.8]} {Human: ENSG00000136144, RCBTB1, RCC1 and BTB domain containing protein 1, [RH, Score=469, Expect=4e-160]; ENSG00000136161, RCBTB2, RCC1 and BTB domain containing protein 2, [RH, Score=449, Expect=3e-152]} {Mouse: ENSMUSG00000035469, Rcbtb1, regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1, [RH, Score=473, Expect=9e-162]; ENSMUSG00000022106, Rcbtb2, regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2, [RH, Score=454, Expect=2e-154]} {Dmel: FBgn0031107, HERC2, HECT and RLD domain containing protein 2, [Score=129, Expect=6e-31]} {Celegans: WBGene00021685, herc-1, HECT and RCC domain E3 ubiquitin ligase, [Score=88.2, Expect=6e-18]} {Smed: dd_Smed_v6_8701_0_1, dd_Smed_v6_8701_0_1, [Score=123, Expect=3e-29]} {RNA1509_10276, RNA1509_13875} {RNA1310_11275, RNA1509_10276, RNA1509_13875} {RNA1509_10276, RNA1509_13875, RNA815_3731}
4.	MligTC455_21840	345	7.19	Mlig455_004913	Neo: Germline Age: Up-Down-Down Region-enriched R4: 2.907/0.03413	KCNK5	0.962	-	-	-	-	0.962	-	Mlig455_004913 {REF} {Length: 1569} {Pfam: Ion channel [PF07885.18, score=78.0]} {Human: ENSG00000164626, KCNK5, potassium two pore domain channel subfamily K member 5, [Score=62.4, Expect=3e-10]; ENSG00000095981, KCNK16, potassium two pore domain channel subfamily K member 16, [Score=59.3, Expect=2e-09]} {Mouse: ENSMUSG00000023387, Kcnk16, potassium channel, subfamily K, member 16, [Score=63.5, Expect=4e-11]; ENSMUSG00000023243, Kcnk5, potassium channel, subfamily K, member 5, [Score=60.8, Expect=5e-10]} {Dmel: FBgn0038621, CG10864, [Score=64.7, Expect=2e-11]} {Celegans: WBGene00006657, twk-2, TWiK family of potassium channels, [Score=66.2, Expect=8e-12]} {Smed: dd_Smed_v6_17586_0_1, dd_Smed_v6_17586_0_1, [Score=65.5, Expect=7e-12]} {RNA1509_47162} {RNA1310_26078} {RNA815_11350}
5.	MligTC455_33159	23	0.49	Mlig455_042357	Neo: - Age: Up-Down-Down, logFC(26M/2M)=0.456 Regeneration-upregulated R4: 5.904 Regeneration-enriched R4: 5.904		0.959	-	-	-	-	0.959	-	Mlig455_042357 {REF} {Length: 29434} {Pfam: Fibronectin type III domain [PF00041.23, score=26.0]; Lipoprotein amino terminal region [PF01347.24, score=24.9]; PAN domain [PF00024.28, score=21.1]} {RNA1509_598} {RNA1310_3.1} {RNA815_10.1}
6.	MligTC455_12946	52	1.07	Mlig455_050111	Neo: - Age: - Regeneration-upregulated R2: 5.740 Regeneration-enriched R2: 5.740		0.958	-	-	-	0.958	-	-	Mlig455_050111 {REF} {Length: 1442} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=50.7]} {Smed: dd_Smed_v6_17171_0_1, dd_Smed_v6_17171_0_1, [Score=167, Expect=3e-48]}